RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
AC027088.1-201ENST00000557966 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
AC027088.1-201ENST00000557966 NIT2Q9NQR4 276 aa10.55□□□□□ -0.72
AC027088.1-201ENST00000557966 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
AC027088.1-201ENST00000557966 TMEM250H0YL14 139 aa10.54□□□□□ -0.72
AC027088.1-201ENST00000557966 TWIST1Q15672 202 aa10.54□□□□□ -0.72
AC027088.1-201ENST00000557966 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
AC027088.1-201ENST00000557966 PKHD1L1Q86WI1 4243 aa10.54□□□□□ -0.72
AC027088.1-201ENST00000557966 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
AC027088.1-201ENST00000557966 C14orf177Q52M58 125 aa10.53□□□□□ -0.72
AC027088.1-201ENST00000557966 GATD1Q8NB37 220 aa10.53□□□□□ -0.72
AC027088.1-201ENST00000557966 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
AC027088.1-201ENST00000557966 TMEM243Q9BU79 118 aa10.53□□□□□ -0.72
AC027088.1-201ENST00000557966 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
AC027088.1-201ENST00000557966 SMDT1Q9H4I9 107 aa10.53□□□□□ -0.72
AC027088.1-201ENST00000557966 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
AC027088.1-201ENST00000557966 FOXA3P55318 350 aaPredicted RBP10.52□□□□□ -0.73
AC027088.1-201ENST00000557966 REG3AQ06141 175 aa10.52□□□□□ -0.73
AC027088.1-201ENST00000557966 SRRM2Q9UQ35 2752 aaKnown RBP10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 FAT3Q8TDW7 4589 aa10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 GATCO43716 136 aaKnown RBP10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 PRSS1P07477 247 aa10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 CEBPGP53567 150 aa10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 FAM231DQ6ZW35 169 aa10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 CHAC1Q9BUX1 264 aa10.51□□□□□ -0.73
AC027088.1-201ENST00000557966 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
AC027088.1-201ENST00000557966 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
AC027088.1-201ENST00000557966 A0A1B0GUV1 79 aa10.49□□□□□ -0.73
AC027088.1-201ENST00000557966 J3QL48 77 aa10.49□□□□□ -0.73
AC027088.1-201ENST00000557966 AMTP48728 403 aa10.49□□□□□ -0.73
AC027088.1-201ENST00000557966 COTL1Q14019 142 aa10.49□□□□□ -0.73
AC027088.1-201ENST00000557966 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
AC027088.1-201ENST00000557966 TMEM218A2RU14 115 aa10.47□□□□□ -0.73
AC027088.1-201ENST00000557966 PLA2G1BP04054 148 aaKnown RBP10.47□□□□□ -0.73
AC027088.1-201ENST00000557966 KRTAP10-4P60372 401 aaPredicted RBP10.47□□□□□ -0.73
AC027088.1-201ENST00000557966 CT83Q5H943 113 aa10.47□□□□□ -0.73
AC027088.1-201ENST00000557966 SEC11CQ9BY50 192 aa10.47□□□□□ -0.73
AC027088.1-201ENST00000557966 LRP1Q07954 4544 aaKnown RBP10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 A8MWL6 223 aa10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 UBE2L6O14933 153 aa10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 SRP19P09132 144 aaKnown RBP10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 PEA15Q15121 130 aa10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 C10orf91Q5T1B1 145 aa10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 SVBPQ8N300 66 aa10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 SMIM7Q9BQ49 75 aa10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 EIF5A2Q9GZV4 153 aaKnown RBP10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 CARHSP1Q9Y2V2 147 aaKnown RBP10.46□□□□□ -0.73
AC027088.1-201ENST00000557966 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
AC027088.1-201ENST00000557966 NDUFS6O75380 124 aaKnown RBP10.45□□□□□ -0.74
AC027088.1-201ENST00000557966 GAS8-AS1O95177 125 aa10.45□□□□□ -0.74
AC027088.1-201ENST00000557966 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
AC027088.1-201ENST00000557966 SMIM15Q7Z3B0 74 aa10.45□□□□□ -0.74
AC027088.1-201ENST00000557966 C9orf163Q8N9P6 203 aa10.45□□□□□ -0.74
AC027088.1-201ENST00000557966 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
AC027088.1-201ENST00000557966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
AC027088.1-201ENST00000557966 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
AC027088.1-201ENST00000557966 SDHAF1A6NFY7 115 aa10.43□□□□□ -0.74
AC027088.1-201ENST00000557966 ZNF727A8MUV8 499 aa10.43□□□□□ -0.74
AC027088.1-201ENST00000557966 PANO1I0J062 215 aa10.43□□□□□ -0.74
AC027088.1-201ENST00000557966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.43□□□□□ -0.74
AC027088.1-201ENST00000557966 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
AC027088.1-201ENST00000557966 SNAPINO95295 136 aa10.42□□□□□ -0.74
AC027088.1-201ENST00000557966 NCR2O95944 276 aa10.42□□□□□ -0.74
AC027088.1-201ENST00000557966 APCSP02743 223 aa10.42□□□□□ -0.74
AC027088.1-201ENST00000557966 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
AC027088.1-201ENST00000557966 TSKUQ8WUA8 353 aa10.42□□□□□ -0.74
AC027088.1-201ENST00000557966 OSTCQ9NRP0 149 aa10.42□□□□□ -0.74
AC027088.1-201ENST00000557966 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 TRBV6-5A0A0K0K1A5 114 aa10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 F8W036 122 aa10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 APOC3P02656 99 aa10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 SLPIP03973 132 aa10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 CNBPP62633 177 aaKnown RBP10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 RNF185Q96GF1 192 aa10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 V9GYV3 84 aa10.41□□□□□ -0.74
AC027088.1-201ENST00000557966 A0A1B0GUT8 65 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 hDV102S1A0JD36 115 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 FAM231BA6NCW3 169 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 GAGE12HA6NDE8 117 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 SDIM1Q6ZPB5 146 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
AC027088.1-201ENST00000557966 C9JQL5 133 aa10.39□□□□□ -0.75
AC027088.1-201ENST00000557966 FGF6P10767 208 aa10.39□□□□□ -0.75
AC027088.1-201ENST00000557966 RPS10P46783 165 aaKnown RBP10.39□□□□□ -0.75
AC027088.1-201ENST00000557966 AMMECR1LQ6DCA0 310 aa10.39□□□□□ -0.75
AC027088.1-201ENST00000557966 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
AC027088.1-201ENST00000557966 ISOC2Q96AB3 205 aa10.39□□□□□ -0.75
AC027088.1-201ENST00000557966 H7C423 109 aa10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 I3L3M4 83 aa10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 TSHBP01222 138 aa10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 RAB4AP20338 218 aa10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 PMCHP20382 165 aa10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
AC027088.1-201ENST00000557966 ESDP10768 282 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms