RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 SLPIP03973 132 aa14.68□□□□□ -0.06
RIPK3-207ENST00000557662 TRGC1P0CF51 173 aa14.68□□□□□ -0.06
RIPK3-207ENST00000557662 NTF3P20783 257 aa14.68□□□□□ -0.06
RIPK3-207ENST00000557662 BCL2P10415 239 aa14.67□□□□□ -0.06
RIPK3-207ENST00000557662 EIF5AL1Q6IS14 154 aaKnown RBP14.67□□□□□ -0.06
RIPK3-207ENST00000557662 TEX46H3BTG2 121 aa14.66□□□□□ -0.06
RIPK3-207ENST00000557662 NUDT10Q8NFP7 164 aa14.66□□□□□ -0.06
RIPK3-207ENST00000557662 NUDT11Q96G61 164 aa14.66□□□□□ -0.06
RIPK3-207ENST00000557662 IFNA1P01562 189 aa14.65□□□□□ -0.06
RIPK3-207ENST00000557662 BIN3Q9NQY0 253 aa14.65□□□□□ -0.06
RIPK3-207ENST00000557662 MED9Q9NWA0 146 aa14.65□□□□□ -0.06
RIPK3-207ENST00000557662 hDV102S1A0JD36 115 aa14.62□□□□□ -0.07
RIPK3-207ENST00000557662 K7EN84 100 aa14.62□□□□□ -0.07
RIPK3-207ENST00000557662 TCTE3Q8IZS6 198 aa14.62□□□□□ -0.07
RIPK3-207ENST00000557662 GATD1Q8NB37 220 aa14.62□□□□□ -0.07
RIPK3-207ENST00000557662 C15orf56Q8N910 161 aa14.61□□□□□ -0.07
RIPK3-207ENST00000557662 MT1HL1P0DM35 61 aa14.6□□□□□ -0.07
RIPK3-207ENST00000557662 AMTP48728 403 aa14.6□□□□□ -0.07
RIPK3-207ENST00000557662 COTL1Q14019 142 aa14.6□□□□□ -0.07
RIPK3-207ENST00000557662 TAGLN2P37802 199 aaKnown RBP14.59□□□□□ -0.07
RIPK3-207ENST00000557662 SLC51BQ86UW2 128 aa14.59□□□□□ -0.07
RIPK3-207ENST00000557662 SPACA4Q8TDM5 124 aa14.59□□□□□ -0.07
RIPK3-207ENST00000557662 GTSF1Q8WW33 167 aa14.59□□□□□ -0.07
RIPK3-207ENST00000557662 RNF185Q96GF1 192 aa14.59□□□□□ -0.07
RIPK3-207ENST00000557662 RNASE7Q9H1E1 156 aaKnown RBP14.59□□□□□ -0.07
RIPK3-207ENST00000557662 RPP21Q9H633 154 aaKnown RBP14.59□□□□□ -0.07
RIPK3-207ENST00000557662 IGHV3-64A0A075B6Q5 118 aa14.58□□□□□ -0.08
RIPK3-207ENST00000557662 OCC1Q8TAD7 63 aa14.58□□□□□ -0.08
RIPK3-207ENST00000557662 UBR4Q5T4S7 5183 aa14.58□□□□□ -0.08
RIPK3-207ENST00000557662 TRAV26-2A0A0B4J265 109 aa14.57□□□□□ -0.08
RIPK3-207ENST00000557662 TWIST1Q15672 202 aa14.57□□□□□ -0.08
RIPK3-207ENST00000557662 UBE2L6O14933 153 aa14.56□□□□□ -0.08
RIPK3-207ENST00000557662 CHTF8P0CG12 524 aa14.56□□□□□ -0.08
RIPK3-207ENST00000557662 Q6ZNX1 250 aa14.56□□□□□ -0.08
RIPK3-207ENST00000557662 TNXBP22105 4242 aa14.56□□□□□ -0.08
RIPK3-207ENST00000557662 A0A087WYN8 130 aa14.55□□□□□ -0.08
RIPK3-207ENST00000557662 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.55□□□□□ -0.08
RIPK3-207ENST00000557662 NCR2O95944 276 aa14.55□□□□□ -0.08
RIPK3-207ENST00000557662 RPL39LQ96EH5 51 aaKnown RBP14.55□□□□□ -0.08
RIPK3-207ENST00000557662 AP5S1Q9NUS5 200 aa14.55□□□□□ -0.08
RIPK3-207ENST00000557662 Q6ZRU5 148 aa14.54□□□□□ -0.08
RIPK3-207ENST00000557662 PLAC8Q9NZF1 115 aa14.54□□□□□ -0.08
RIPK3-207ENST00000557662 FOXA3P55318 350 aaPredicted RBP14.53□□□□□ -0.08
RIPK3-207ENST00000557662 GAGE12HA6NDE8 117 aa14.52□□□□□ -0.09
RIPK3-207ENST00000557662 H7C423 109 aa14.52□□□□□ -0.09
RIPK3-207ENST00000557662 TMEM250H0YL14 139 aa14.51□□□□□ -0.09
RIPK3-207ENST00000557662 FAM231DQ6ZW35 169 aa14.51□□□□□ -0.09
RIPK3-207ENST00000557662 LYPD6BQ8NI32 183 aa14.51□□□□□ -0.09
RIPK3-207ENST00000557662 PLA2G2DQ9UNK4 145 aa14.51□□□□□ -0.09
RIPK3-207ENST00000557662 GVQW2A0A096LPI5 108 aaPredicted RBP14.5□□□□□ -0.09
RIPK3-207ENST00000557662 TRBV6-5A0A0K0K1A5 114 aa14.5□□□□□ -0.09
RIPK3-207ENST00000557662 FAM231BA6NCW3 169 aa14.5□□□□□ -0.09
RIPK3-207ENST00000557662 CHCHD10Q8WYQ3 142 aaPredicted RBP14.5□□□□□ -0.09
RIPK3-207ENST00000557662 SDHAF1A6NFY7 115 aa14.49□□□□□ -0.09
RIPK3-207ENST00000557662 CFAP161Q6P656 301 aa14.49□□□□□ -0.09
RIPK3-207ENST00000557662 TEX261Q6UWH6 196 aa14.49□□□□□ -0.09
RIPK3-207ENST00000557662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.48□□□□□ -0.09
RIPK3-207ENST00000557662 IGKV2-29A2NJV5 120 aaPredicted RBP14.48□□□□□ -0.09
RIPK3-207ENST00000557662 FGF6P10767 208 aa14.48□□□□□ -0.09
RIPK3-207ENST00000557662 RPS10P46783 165 aaKnown RBP14.48□□□□□ -0.09
RIPK3-207ENST00000557662 APCSP02743 223 aa14.47□□□□□ -0.09
RIPK3-207ENST00000557662 ESDP10768 282 aa14.47□□□□□ -0.09
RIPK3-207ENST00000557662 COX6A2Q02221 97 aa14.47□□□□□ -0.09
RIPK3-207ENST00000557662 FOXI1Q12951 378 aa14.47□□□□□ -0.09
RIPK3-207ENST00000557662 CT83Q5H943 113 aa14.47□□□□□ -0.09
RIPK3-207ENST00000557662 GAS8-AS1O95177 125 aa14.46□□□□□ -0.09
RIPK3-207ENST00000557662 ZNF25P17030 456 aaPredicted RBP14.46□□□□□ -0.09
RIPK3-207ENST00000557662 HIGD2BQ4VC39 106 aa14.46□□□□□ -0.09
RIPK3-207ENST00000557662 PRSS3P2Q8NHM4 247 aa14.46□□□□□ -0.09
RIPK3-207ENST00000557662 IGKV3OR2-268A0A0C4DH90 116 aa14.45□□□□□ -0.1
RIPK3-207ENST00000557662 GATCO43716 136 aaKnown RBP14.45□□□□□ -0.1
RIPK3-207ENST00000557662 NDUFS6O75380 124 aaKnown RBP14.45□□□□□ -0.1
RIPK3-207ENST00000557662 AMMECR1LQ6DCA0 310 aa14.45□□□□□ -0.1
RIPK3-207ENST00000557662 OR5A1Q8NGJ0 315 aa14.45□□□□□ -0.1
RIPK3-207ENST00000557662 A8MWL6 223 aa14.44□□□□□ -0.1
RIPK3-207ENST00000557662 PHOX2AO14813 284 aa14.44□□□□□ -0.1
RIPK3-207ENST00000557662 SMIM15Q7Z3B0 74 aa14.44□□□□□ -0.1
RIPK3-207ENST00000557662 I3L3M4 83 aa14.43□□□□□ -0.1
RIPK3-207ENST00000557662 TSHBP01222 138 aa14.43□□□□□ -0.1
RIPK3-207ENST00000557662 RNASEKQ6P5S7 137 aaKnown RBP14.43□□□□□ -0.1
RIPK3-207ENST00000557662 FAM210AQ96ND0 272 aa14.42□□□□□ -0.1
RIPK3-207ENST00000557662 POLR2KP53803 58 aaKnown RBP14.41□□□□□ -0.1
RIPK3-207ENST00000557662 BLOC1S1P78537 153 aa14.41□□□□□ -0.1
RIPK3-207ENST00000557662 ALKAL2Q6UX46 152 aa14.41□□□□□ -0.1
RIPK3-207ENST00000557662 A0A096LNI7 61 aa14.4□□□□□ -0.1
RIPK3-207ENST00000557662 LINC00959A0A1B0GUT2 108 aa14.4□□□□□ -0.1
RIPK3-207ENST00000557662 MRPL52Q86TS9 123 aaKnown RBP14.4□□□□□ -0.1
RIPK3-207ENST00000557662 DPH3Q96FX2 82 aa14.4□□□□□ -0.1
RIPK3-207ENST00000557662 TMEM191AQ9H0A3 160 aa14.4□□□□□ -0.1
RIPK3-207ENST00000557662 LINC01551Q86U37 167 aa14.39□□□□□ -0.11
RIPK3-207ENST00000557662 TRBV27A0A0K0K1C4 114 aa14.38□□□□□ -0.11
RIPK3-207ENST00000557662 PMCHP20382 165 aa14.38□□□□□ -0.11
RIPK3-207ENST00000557662 PRR3P79522 188 aaKnown RBP14.38□□□□□ -0.11
RIPK3-207ENST00000557662 MAJINQ3KP22 176 aa14.38□□□□□ -0.11
RIPK3-207ENST00000557662 C7orf33Q8WU49 177 aa14.38□□□□□ -0.11
RIPK3-207ENST00000557662 TSKUQ8WUA8 353 aa14.38□□□□□ -0.11
RIPK3-207ENST00000557662 TMEM242Q9NWH2 141 aa14.38□□□□□ -0.11
RIPK3-207ENST00000557662 IGKV2-24A0A0C4DH68 120 aa14.37□□□□□ -0.11
RIPK3-207ENST00000557662 A0A1B0GUT8 65 aa14.37□□□□□ -0.11
RIPK3-207ENST00000557662 CDC42SE2Q9NRR3 84 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms