RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 OR4C5Q8NGB2 326 aa8.56□□□□□ -1.04
TMEM260-215ENST00000557626 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
TMEM260-215ENST00000557626 TGIF2-C20orf24A0A0A6YYL0 155 aa8.55□□□□□ -1.04
TMEM260-215ENST00000557626 GATA1P15976 413 aaPredicted RBP8.55□□□□□ -1.04
TMEM260-215ENST00000557626 RIGQ13278 110 aa8.55□□□□□ -1.04
TMEM260-215ENST00000557626 ZFP2Q6ZN57 461 aa8.55□□□□□ -1.04
TMEM260-215ENST00000557626 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
TMEM260-215ENST00000557626 KRTAP9-7A8MTY7 169 aa8.54□□□□□ -1.04
TMEM260-215ENST00000557626 S100A1P23297 94 aa8.54□□□□□ -1.04
TMEM260-215ENST00000557626 CAMPP49913 170 aa8.54□□□□□ -1.04
TMEM260-215ENST00000557626 BTF3L4Q96K17 158 aa8.54□□□□□ -1.04
TMEM260-215ENST00000557626 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
TMEM260-215ENST00000557626 TMEM191AQ9H0A3 160 aa8.54□□□□□ -1.04
TMEM260-215ENST00000557626 TRBV24-1A0A075B6N3 115 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 TRAV9-1A0A075B6T8 112 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 RAB4AP20338 218 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 CRYBA4P53673 196 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 HBBP68871 147 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 MRPL23Q16540 153 aaKnown RBP8.53□□□□□ -1.04
TMEM260-215ENST00000557626 FAM74A4Q5TZK3 123 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 TMEM136Q6ZRR5 245 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 ATP5L2Q7Z4Y8 100 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 AMN1Q8IY45 258 aa8.53□□□□□ -1.04
TMEM260-215ENST00000557626 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
TMEM260-215ENST00000557626 KCNIP4Q6PIL6 250 aa8.52□□□□□ -1.05
TMEM260-215ENST00000557626 SLC25A29Q8N8R3 303 aa8.52□□□□□ -1.05
TMEM260-215ENST00000557626 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
TMEM260-215ENST00000557626 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
TMEM260-215ENST00000557626 TRAV26-2A0A0B4J265 109 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 A0A0J9YXV3 536 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 A0A1B0GW15 77 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 COLCA2A8K830 154 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 PANO1I0J062 215 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 M0QY20 66 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 RHODO00212 210 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 FAM104BQ5XKR9 115 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 SUMO4Q6EEV6 95 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 BORCS7Q96B45 105 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 PRO0255Q9UI72 69 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
TMEM260-215ENST00000557626 TRBV6-4A0A1B0GX49 114 aa8.5□□□□□ -1.05
TMEM260-215ENST00000557626 CIDEAO60543 219 aa8.5□□□□□ -1.05
TMEM260-215ENST00000557626 MGPP08493 103 aa8.5□□□□□ -1.05
TMEM260-215ENST00000557626 LINC00694P0DN24 101 aa8.5□□□□□ -1.05
TMEM260-215ENST00000557626 GYPEP15421 78 aa8.5□□□□□ -1.05
TMEM260-215ENST00000557626 S100PP25815 95 aa8.5□□□□□ -1.05
TMEM260-215ENST00000557626 RPS10P46783 165 aaKnown RBP8.5□□□□□ -1.05
TMEM260-215ENST00000557626 RAB4BP61018 213 aa8.5□□□□□ -1.05
TMEM260-215ENST00000557626 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
TMEM260-215ENST00000557626 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
TMEM260-215ENST00000557626 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
TMEM260-215ENST00000557626 SLAQ13239 276 aa8.49□□□□□ -1.05
TMEM260-215ENST00000557626 ZNF56Q15929 161 aa8.49□□□□□ -1.05
TMEM260-215ENST00000557626 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
TMEM260-215ENST00000557626 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
TMEM260-215ENST00000557626 F5H697 171 aa8.48□□□□□ -1.05
TMEM260-215ENST00000557626 K7EQD1 137 aa8.48□□□□□ -1.05
TMEM260-215ENST00000557626 SRIP30626 198 aa8.48□□□□□ -1.05
TMEM260-215ENST00000557626 NRACQ8N912 160 aa8.48□□□□□ -1.05
TMEM260-215ENST00000557626 NEXN-AS1Q8NBZ9 246 aa8.48□□□□□ -1.05
TMEM260-215ENST00000557626 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
TMEM260-215ENST00000557626 NCR2O95944 276 aa8.47□□□□□ -1.05
TMEM260-215ENST00000557626 SMIM17P0DL12 118 aa8.47□□□□□ -1.05
TMEM260-215ENST00000557626 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
TMEM260-215ENST00000557626 GNB1LQ9BYB4 327 aa8.47□□□□□ -1.05
TMEM260-215ENST00000557626 PHOX2AO14813 284 aa8.46□□□□□ -1.06
TMEM260-215ENST00000557626 S100A8P05109 93 aa8.46□□□□□ -1.06
TMEM260-215ENST00000557626 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
TMEM260-215ENST00000557626 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
TMEM260-215ENST00000557626 SMIM15Q7Z3B0 74 aa8.46□□□□□ -1.06
TMEM260-215ENST00000557626 GAGE12JA6NER3 117 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 GAGE1Q13065 139 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 GAGE4Q13068 117 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 GAGE5Q13069 117 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 RHOHQ15669 191 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 MRAP2Q96G30 205 aa8.45□□□□□ -1.06
TMEM260-215ENST00000557626 TRBV10-1A0A0K0K1A3 114 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 D6R8Y8 96 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 NPYP01303 97 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 HLA-DQA1P01909 254 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 UBE2D3P61077 147 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 UBE2D2P62837 147 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 Q8N976 141 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
TMEM260-215ENST00000557626 NIT2Q9NQR4 276 aa8.44□□□□□ -1.06
TMEM260-215ENST00000557626 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
TMEM260-215ENST00000557626 APCSP02743 223 aa8.43□□□□□ -1.06
TMEM260-215ENST00000557626 RAB5AP20339 215 aa8.43□□□□□ -1.06
TMEM260-215ENST00000557626 COX19Q49B96 90 aa8.43□□□□□ -1.06
TMEM260-215ENST00000557626 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
TMEM260-215ENST00000557626 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
TMEM260-215ENST00000557626 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
TMEM260-215ENST00000557626 CKS2P33552 79 aa8.42□□□□□ -1.06
TMEM260-215ENST00000557626 POLR2KP53803 58 aaKnown RBP8.42□□□□□ -1.06
TMEM260-215ENST00000557626 LAGE3Q14657 143 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms