RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CD28P10747 220 aa12.93□□□□□ -0.34
XRCC3-218ENST00000557439 VCX2Q9H322 139 aa12.93□□□□□ -0.34
XRCC3-218ENST00000557439 RHODO00212 210 aa12.93□□□□□ -0.34
XRCC3-218ENST00000557439 EIF4EBP3O60516 100 aaPredicted RBP12.93□□□□□ -0.34
XRCC3-218ENST00000557439 NFE4Q86UQ8 179 aa12.93□□□□□ -0.34
XRCC3-218ENST00000557439 TRAV8-3A0A0A6YYJ7 113 aa12.92□□□□□ -0.34
XRCC3-218ENST00000557439 TRAV2A0A0B4J234 112 aa12.92□□□□□ -0.34
XRCC3-218ENST00000557439 Q5PR19 223 aa12.92□□□□□ -0.34
XRCC3-218ENST00000557439 A8MZ25 164 aa12.92□□□□□ -0.34
XRCC3-218ENST00000557439 H7C2G1 150 aa12.92□□□□□ -0.34
XRCC3-218ENST00000557439 RAX2Q96IS3 184 aa12.91□□□□□ -0.34
XRCC3-218ENST00000557439 ITPR3Q14573 2671 aa12.91□□□□□ -0.34
XRCC3-218ENST00000557439 Q96MF0 132 aa12.91□□□□□ -0.34
XRCC3-218ENST00000557439 JMJD1CQ15652 2540 aa12.91□□□□□ -0.34
XRCC3-218ENST00000557439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-218ENST00000557439 IGKV2-29A2NJV5 120 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-218ENST00000557439 A4D1N5 150 aa12.9□□□□□ -0.34
XRCC3-218ENST00000557439 C10orf126Q8N4M7 172 aa12.9□□□□□ -0.34
XRCC3-218ENST00000557439 C2CD3Q4AC94 2353 aa12.9□□□□□ -0.34
XRCC3-218ENST00000557439 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
XRCC3-218ENST00000557439 LEPROTO15243 131 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 TCL1BO95988 128 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 RNF152Q8N8N0 203 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 LINC01587Q99440 93 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 IGHV3OR16-12A0A075B7B8 117 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
XRCC3-218ENST00000557439 UBE2D3P61077 147 aa12.88□□□□□ -0.35
XRCC3-218ENST00000557439 UBE2D2P62837 147 aa12.88□□□□□ -0.35
XRCC3-218ENST00000557439 SMAGPQ0VAQ4 97 aa12.88□□□□□ -0.35
XRCC3-218ENST00000557439 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
XRCC3-218ENST00000557439 AZU1P20160 251 aa12.88□□□□□ -0.35
XRCC3-218ENST00000557439 MUSTN1Q8IVN3 82 aa12.88□□□□□ -0.35
XRCC3-218ENST00000557439 XCL2Q9UBD3 114 aa12.88□□□□□ -0.35
XRCC3-218ENST00000557439 GAGE12HA6NDE8 117 aa12.87□□□□□ -0.35
XRCC3-218ENST00000557439 M0R2P5 195 aa12.87□□□□□ -0.35
XRCC3-218ENST00000557439 TMEM238C9JI98 176 aa12.86□□□□□ -0.35
XRCC3-218ENST00000557439 IGHV3-30-3P0DP02 117 aa12.86□□□□□ -0.35
XRCC3-218ENST00000557439 FLNAP21333 2647 aaKnown RBP12.86□□□□□ -0.35
XRCC3-218ENST00000557439 NPC2P61916 151 aa12.86□□□□□ -0.35
XRCC3-218ENST00000557439 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
XRCC3-218ENST00000557439 CHCHD7Q9BUK0 85 aa12.85□□□□□ -0.35
XRCC3-218ENST00000557439 ACANP16112 2415 aa12.85□□□□□ -0.35
XRCC3-218ENST00000557439 SCGB1C2P0DMR2 95 aa12.85□□□□□ -0.35
XRCC3-218ENST00000557439 C11orf72Q8NBR9 251 aa12.85□□□□□ -0.35
XRCC3-218ENST00000557439 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
XRCC3-218ENST00000557439 PRO1854Q9UHT4 67 aa12.85□□□□□ -0.35
XRCC3-218ENST00000557439 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
XRCC3-218ENST00000557439 Q6ZUT4 128 aa12.84□□□□□ -0.35
XRCC3-218ENST00000557439 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
XRCC3-218ENST00000557439 SPINK8P0C7L1 97 aa12.84□□□□□ -0.35
XRCC3-218ENST00000557439 ZNF415Q09FC8 603 aa12.84□□□□□ -0.35
XRCC3-218ENST00000557439 PEMTQ9UBM1 199 aa12.84□□□□□ -0.35
XRCC3-218ENST00000557439 C4orf3Q8WVX3 66 aa12.83□□□□□ -0.35
XRCC3-218ENST00000557439 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.35
XRCC3-218ENST00000557439 A8MTW9 85 aa12.83□□□□□ -0.36
XRCC3-218ENST00000557439 A8MWV9 139 aa12.83□□□□□ -0.36
XRCC3-218ENST00000557439 HIST2H2BCQ6DN03 193 aa12.83□□□□□ -0.36
XRCC3-218ENST00000557439 ZNF843Q8N446 348 aa12.83□□□□□ -0.36
XRCC3-218ENST00000557439 SETXQ7Z333 2677 aaKnown RBP12.82□□□□□ -0.36
XRCC3-218ENST00000557439 FOXI1Q12951 378 aa12.82□□□□□ -0.36
XRCC3-218ENST00000557439 ADAMTSL4-AS1Q5T5F5 129 aa12.82□□□□□ -0.36
XRCC3-218ENST00000557439 SIGMAR1Q99720 223 aa12.82□□□□□ -0.36
XRCC3-218ENST00000557439 UBE2D4Q9Y2X8 147 aa12.82□□□□□ -0.36
XRCC3-218ENST00000557439 MTORP42345 2549 aa12.82□□□□□ -0.36
XRCC3-218ENST00000557439 J3QR89 54 aa12.81□□□□□ -0.36
XRCC3-218ENST00000557439 PRSS2P07478 247 aa12.81□□□□□ -0.36
XRCC3-218ENST00000557439 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
XRCC3-218ENST00000557439 Q6ZSV7 163 aa12.81□□□□□ -0.36
XRCC3-218ENST00000557439 Q8N2B8 174 aa12.81□□□□□ -0.36
XRCC3-218ENST00000557439 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
XRCC3-218ENST00000557439 MRPS36P82909 103 aaKnown RBP12.81□□□□□ -0.36
XRCC3-218ENST00000557439 FHL3Q13643 280 aa12.81□□□□□ -0.36
XRCC3-218ENST00000557439 TMEM263Q8WUH6 116 aaKnown RBP12.81□□□□□ -0.36
XRCC3-218ENST00000557439 IGHV3-53P01767 116 aa12.8□□□□□ -0.36
XRCC3-218ENST00000557439 IGHV3-33P01772 117 aa12.8□□□□□ -0.36
XRCC3-218ENST00000557439 KRTAP1-3Q8IUG1 177 aa12.8□□□□□ -0.36
XRCC3-218ENST00000557439 PYGO1Q9Y3Y4 419 aa12.8□□□□□ -0.36
XRCC3-218ENST00000557439 CARD19Q96LW7 228 aa12.8□□□□□ -0.36
XRCC3-218ENST00000557439 CIDEAO60543 219 aa12.79□□□□□ -0.36
XRCC3-218ENST00000557439 DAND5Q8N907 189 aa12.79□□□□□ -0.36
XRCC3-218ENST00000557439 WFDC11Q8NEX6 87 aa12.79□□□□□ -0.36
XRCC3-218ENST00000557439 LITAFQ99732 161 aa12.79□□□□□ -0.36
XRCC3-218ENST00000557439 NDUFA7O95182 113 aa12.78□□□□□ -0.36
XRCC3-218ENST00000557439 INSP01308 110 aa12.78□□□□□ -0.36
XRCC3-218ENST00000557439 Q1RN00 199 aa12.78□□□□□ -0.36
XRCC3-218ENST00000557439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-218ENST00000557439 EDA2RQ9HAV5 297 aa12.78□□□□□ -0.36
XRCC3-218ENST00000557439 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
XRCC3-218ENST00000557439 NDUFA12Q9UI09 145 aa12.78□□□□□ -0.36
XRCC3-218ENST00000557439 C1orf158Q8N1D5 194 aa12.77□□□□□ -0.37
XRCC3-218ENST00000557439 TRGV1A0A0A0MS02 117 aa12.76□□□□□ -0.37
XRCC3-218ENST00000557439 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
XRCC3-218ENST00000557439 CDKN2A-AS1Q9UH64 79 aa12.76□□□□□ -0.37
XRCC3-218ENST00000557439 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
XRCC3-218ENST00000557439 ESM1Q9NQ30 184 aa12.76□□□□□ -0.37
XRCC3-218ENST00000557439 LINC00694P0DN24 101 aa12.76□□□□□ -0.37
XRCC3-218ENST00000557439 WFDC10AQ9H1F0 79 aa12.76□□□□□ -0.37
XRCC3-218ENST00000557439 DNAJC9-AS1A6NH13 148 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms