RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MPV17L2Q567V2 206 aa8.35□□□□□ -1.07
SLIRP-209ENST00000557342 CBLN2Q8IUK8 224 aa8.35□□□□□ -1.07
SLIRP-209ENST00000557342 MRAP2Q96G30 205 aa8.35□□□□□ -1.07
SLIRP-209ENST00000557342 TMEM243Q9BU79 118 aa8.35□□□□□ -1.07
SLIRP-209ENST00000557342 PKD1P98161 4303 aa8.35□□□□□ -1.07
SLIRP-209ENST00000557342 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 TRBV6-5A0A0K0K1A5 114 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 NCR2O95944 276 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 CRPP02741 224 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 ANGP03950 147 aaKnown RBP8.34□□□□□ -1.07
SLIRP-209ENST00000557342 S100A8P05109 93 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 RAB4AP20338 218 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 GAGE6Q13070 117 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 CDPF1Q6NVV7 123 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 UBE2WQ96B02 151 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 RPL39LQ96EH5 51 aaKnown RBP8.34□□□□□ -1.07
SLIRP-209ENST00000557342 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
SLIRP-209ENST00000557342 UBE2L6O14933 153 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 PPP1R17O96001 155 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 S100PP25815 95 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 AMTP48728 403 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 KRTAP10-2P60368 255 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 AMN1Q8IY45 258 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 RNF185Q96GF1 192 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 ST20Q9HBF5 79 aa8.33□□□□□ -1.08
SLIRP-209ENST00000557342 IGKV2D-24A0A075B6R9 120 aa8.32□□□□□ -1.08
SLIRP-209ENST00000557342 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
SLIRP-209ENST00000557342 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
SLIRP-209ENST00000557342 CAMPP49913 170 aa8.32□□□□□ -1.08
SLIRP-209ENST00000557342 RBX1P62877 108 aa8.32□□□□□ -1.08
SLIRP-209ENST00000557342 Q8N976 141 aa8.32□□□□□ -1.08
SLIRP-209ENST00000557342 BTF3L4Q96K17 158 aa8.32□□□□□ -1.08
SLIRP-209ENST00000557342 TRBV24-1A0A075B6N3 115 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 A0A1B0GUV1 79 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 I3L3M4 83 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 APCSP02743 223 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 PMCHP20382 165 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 HBBP68871 147 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 MIAQ16674 131 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 FAM104BQ5XKR9 115 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 C1orf43Q9BWL3 253 aa8.31□□□□□ -1.08
SLIRP-209ENST00000557342 H7C423 109 aa8.3□□□□□ -1.08
SLIRP-209ENST00000557342 MRPL54Q6P161 138 aaKnown RBP8.3□□□□□ -1.08
SLIRP-209ENST00000557342 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
SLIRP-209ENST00000557342 ATP5L2Q7Z4Y8 100 aa8.3□□□□□ -1.08
SLIRP-209ENST00000557342 NTN5Q8WTR8 489 aaPredicted RBP8.3□□□□□ -1.08
SLIRP-209ENST00000557342 GAS8-AS1O95177 125 aa8.29□□□□□ -1.08
SLIRP-209ENST00000557342 RPS10P46783 165 aaKnown RBP8.29□□□□□ -1.08
SLIRP-209ENST00000557342 MRPL51Q4U2R6 128 aaKnown RBP8.29□□□□□ -1.08
SLIRP-209ENST00000557342 LINC00269Q8N2A0 174 aa8.29□□□□□ -1.08
SLIRP-209ENST00000557342 Q8N814 137 aa8.29□□□□□ -1.08
SLIRP-209ENST00000557342 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
SLIRP-209ENST00000557342 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
SLIRP-209ENST00000557342 PRR34Q9NV39 138 aa8.29□□□□□ -1.08
SLIRP-209ENST00000557342 TRBV27A0A0K0K1C4 114 aa8.28□□□□□ -1.08
SLIRP-209ENST00000557342 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
SLIRP-209ENST00000557342 COLCA2A8K830 154 aa8.28□□□□□ -1.08
SLIRP-209ENST00000557342 VCYO14598 125 aa8.28□□□□□ -1.08
SLIRP-209ENST00000557342 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
SLIRP-209ENST00000557342 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
SLIRP-209ENST00000557342 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 IGLV5-52A0A0A0MRZ9 124 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 SMKR1H3BMG3 65 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 CDK2AP2O75956 126 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 CKS2P33552 79 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
SLIRP-209ENST00000557342 REG3AQ06141 175 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 AMMECR1LQ6DCA0 310 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 NRACQ8N912 160 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 BAALCQ8WXS3 180 aa8.27□□□□□ -1.09
SLIRP-209ENST00000557342 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 TSHBP01222 138 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 PPBPP02775 128 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 COX19Q49B96 90 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 CLPSL2Q6UWE3 100 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 C20orf78Q9BR46 151 aa8.26□□□□□ -1.09
SLIRP-209ENST00000557342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-209ENST00000557342 IGKV2-29A2NJV5 120 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-209ENST00000557342 LECT2O14960 151 aa8.25□□□□□ -1.09
SLIRP-209ENST00000557342 ESDP10768 282 aa8.25□□□□□ -1.09
SLIRP-209ENST00000557342 ZNF25P17030 456 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-209ENST00000557342 GCSHP23434 173 aa8.25□□□□□ -1.09
SLIRP-209ENST00000557342 FCER1GP30273 86 aa8.25□□□□□ -1.09
SLIRP-209ENST00000557342 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
SLIRP-209ENST00000557342 WFDC2Q14508 124 aa8.25□□□□□ -1.09
SLIRP-209ENST00000557342 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
SLIRP-209ENST00000557342 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
SLIRP-209ENST00000557342 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
SLIRP-209ENST00000557342 D6R8Y8 96 aa8.24□□□□□ -1.09
SLIRP-209ENST00000557342 PHOX2AO14813 284 aa8.24□□□□□ -1.09
SLIRP-209ENST00000557342 TCAPO15273 167 aa8.24□□□□□ -1.09
SLIRP-209ENST00000557342 HLA-DQA1P01909 254 aa8.24□□□□□ -1.09
SLIRP-209ENST00000557342 FGF6P10767 208 aa8.24□□□□□ -1.09
SLIRP-209ENST00000557342 RAB5AP20339 215 aa8.24□□□□□ -1.09
SLIRP-209ENST00000557342 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
SLIRP-209ENST00000557342 SMAGPQ0VAQ4 97 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms