RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 DERL1Q9BUN8 251 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 KIF25-AS1Q9Y6Z4 181 aa5.52□□□□□ -1.53
VRK1-206ENST00000557222 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
VRK1-206ENST00000557222 IGHV1-24A0A0C4DH33 117 aa5.51□□□□□ -1.53
VRK1-206ENST00000557222 H7C1H1 209 aa5.51□□□□□ -1.53
VRK1-206ENST00000557222 REG3AQ06141 175 aa5.51□□□□□ -1.53
VRK1-206ENST00000557222 AP1S3Q96PC3 154 aa5.51□□□□□ -1.53
VRK1-206ENST00000557222 FXYD6-FXYD2A0A087WZ82 144 aa5.5□□□□□ -1.53
VRK1-206ENST00000557222 PANO1I0J062 215 aa5.5□□□□□ -1.53
VRK1-206ENST00000557222 GAGE6Q13070 117 aa5.5□□□□□ -1.53
VRK1-206ENST00000557222 BAGE2Q86Y30 109 aa5.5□□□□□ -1.53
VRK1-206ENST00000557222 MBD3L1Q8WWY6 194 aa5.5□□□□□ -1.53
VRK1-206ENST00000557222 PLAC8Q9NZF1 115 aa5.5□□□□□ -1.53
VRK1-206ENST00000557222 A0A087WYN8 130 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 hDV102S1A0JD36 115 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 UMAD1C9J7I0 102 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 M0QY20 66 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 PAGE4O60829 102 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 PFDN1O60925 122 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 CFAP161Q6P656 301 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 SPACA4Q8TDM5 124 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 DPH3Q96FX2 82 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 PGLYRP4Q96LB8 373 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 CYTL1Q9NRR1 136 aa5.49□□□□□ -1.53
VRK1-206ENST00000557222 RPS20P60866 119 aaKnown RBP5.48□□□□□ -1.53
VRK1-206ENST00000557222 CACNG7P62955 275 aa5.48□□□□□ -1.53
VRK1-206ENST00000557222 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
VRK1-206ENST00000557222 TMUB2Q71RG4 321 aa5.48□□□□□ -1.53
VRK1-206ENST00000557222 C20orf203Q8NBC4 194 aa5.48□□□□□ -1.53
VRK1-206ENST00000557222 C7orf33Q8WU49 177 aa5.48□□□□□ -1.53
VRK1-206ENST00000557222 TMEM243Q9BU79 118 aa5.48□□□□□ -1.53
VRK1-206ENST00000557222 F2Z2F3 143 aa5.47□□□□□ -1.53
VRK1-206ENST00000557222 WDR73Q6P4I2 378 aa5.47□□□□□ -1.53
VRK1-206ENST00000557222 SFT2D1Q8WV19 159 aa5.47□□□□□ -1.53
VRK1-206ENST00000557222 LINC01600Q96MT4 127 aa5.47□□□□□ -1.53
VRK1-206ENST00000557222 DPH3P1Q9H4G8 78 aa5.47□□□□□ -1.53
VRK1-206ENST00000557222 IGLV4-60A0A075B6I1 120 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 MUC21A0A0G2JKD1 596 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 MUC21A0A140T8X8 626 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 XKRY2A2RUG3 117 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 IGLC6P0CF74 106 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 RPS10P46783 165 aaKnown RBP5.46□□□□□ -1.54
VRK1-206ENST00000557222 RASL11AQ6T310 242 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 SMIM12Q96EX1 92 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 NIT2Q9NQR4 276 aa5.46□□□□□ -1.54
VRK1-206ENST00000557222 G3V3Q6 166 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 UBE2L6O14933 153 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 ARPC5O15511 151 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 NDUFS6O75380 124 aaKnown RBP5.45□□□□□ -1.54
VRK1-206ENST00000557222 TRGC1P0CF51 173 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 RPL35P42766 123 aaKnown RBP5.45□□□□□ -1.54
VRK1-206ENST00000557222 ZNF345Q14585 488 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 SUMO4Q6EEV6 95 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 KCNRGQ8N5I3 272 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 FER1L6-AS1Q8NA97 138 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 C11orf52Q96A22 123 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 PKIGQ9Y2B9 76 aa5.45□□□□□ -1.54
VRK1-206ENST00000557222 H7C423 109 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 PHOX2AO14813 284 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 MGPP08493 103 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 CHTF8P0CG12 524 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 SULT1A2P50226 295 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 NKX2-5P52952 324 aaPredicted RBP5.44□□□□□ -1.54
VRK1-206ENST00000557222 SSTP61278 116 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 COTL1Q14019 142 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 C15orf56Q8N910 161 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 FAM213BQ8TBF2 198 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 GFRA4Q9GZZ7 299 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 MANBALQ9NQG1 85 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 BIN3Q9NQY0 253 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 BATF3Q9NR55 127 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 LINC00474Q9P2X8 69 aa5.44□□□□□ -1.54
VRK1-206ENST00000557222 TRAV1-1A0A0B4J248 108 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 A0A0J9YXV3 536 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 C19orf71A6NCJ1 209 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 NCR2O95944 276 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 AMTP48728 403 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 EIF5AP63241 154 aaKnown RBP5.43□□□□□ -1.54
VRK1-206ENST00000557222 PRR3P79522 188 aaKnown RBP5.43□□□□□ -1.54
VRK1-206ENST00000557222 COX6A2Q02221 97 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 SPINK6Q6UWN8 80 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 OR2D3Q8NGH3 330 aa5.43□□□□□ -1.54
VRK1-206ENST00000557222 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
VRK1-206ENST00000557222 HMSDA8MTL9 139 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 RAB5CP51148 216 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 CCL20P78556 96 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 MAJINQ3KP22 176 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 REG3GQ6UW15 175 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 C9orf62Q8N4C0 152 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 PRSS3P2Q8NHM4 247 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 GTSF1Q8WW33 167 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 FAM210AQ96ND0 272 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 TPPP3Q9BW30 176 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 CNFNQ9BYD5 112 aa5.42□□□□□ -1.54
VRK1-206ENST00000557222 IFNA1P01562 189 aa5.41□□□□□ -1.54
VRK1-206ENST00000557222 NTF3P20783 257 aa5.41□□□□□ -1.54
VRK1-206ENST00000557222 CENPWQ5EE01 88 aa5.41□□□□□ -1.54
VRK1-206ENST00000557222 TEX261Q6UWH6 196 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms