RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ATP5LO75964 103 aa6.53□□□□□ -1.36
HNRNPC-228ENST00000557033 RAB4BP61018 213 aa6.53□□□□□ -1.36
HNRNPC-228ENST00000557033 SMIM29Q86T20 159 aa6.53□□□□□ -1.36
HNRNPC-228ENST00000557033 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
HNRNPC-228ENST00000557033 SNAI2O43623 268 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 OR5AL1P0C617 328 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 FUSP35637 526 aaKnown RBP eCLIP6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 RPL35P42766 123 aaKnown RBP6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 KRTAP10-1P60331 282 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 CCL20P78556 96 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 TCTE3Q8IZS6 198 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 Q8N814 137 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 GNG13Q9P2W3 67 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
HNRNPC-228ENST00000557033 SULT1A2P50226 295 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 UBE2D3P61077 147 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 UBE2D2P62837 147 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 RPL19P84098 196 aaKnown RBP6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 ELOBQ15370 118 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 SPANXN1Q5VSR9 72 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 NIT1Q86X76 327 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 SMIM12Q96EX1 92 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 CHCHD7Q9BUK0 85 aa6.51□□□□□ -1.37
HNRNPC-228ENST00000557033 EPM2AB3EWF7 344 aa6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 PDE6DO43924 150 aa6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 RPS20P60866 119 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 SLC51BQ86UW2 128 aa6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 OR10AG1Q8NH19 301 aa6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 RMI2Q96E14 147 aa6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-228ENST00000557033 A0A087WX48 190 aa6.49□□□□□ -1.37
HNRNPC-228ENST00000557033 IFNA1P01562 189 aa6.49□□□□□ -1.37
HNRNPC-228ENST00000557033 C1QBP02746 253 aa6.49□□□□□ -1.37
HNRNPC-228ENST00000557033 MEF2BQ02080 365 aaPredicted RBP6.49□□□□□ -1.37
HNRNPC-228ENST00000557033 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
HNRNPC-228ENST00000557033 TRBV6-8A0A0A6YYG3 113 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 C19orf71A6NCJ1 209 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 IGLV2-8P01709 118 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 GNG4P50150 75 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 ZNF56Q15929 161 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 TMEM97Q5BJF2 176 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 CENPWQ5EE01 88 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 DERL1Q9BUN8 251 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 PPDPFQ9H3Y8 114 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 BIN3Q9NQY0 253 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 VAX2Q9UIW0 290 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
HNRNPC-228ENST00000557033 RAB19A4D1S5 217 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 RBFOX3A6NFN3 312 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 TMEM262E9PQX1 116 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 F2Z2F3 143 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 IGLC6P0CF74 106 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 PKIAP61925 76 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 CACNG7P62955 275 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 Q0VG73 95 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 FRZBQ92765 325 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 AP1S3Q96PC3 154 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 MED9Q9NWA0 146 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 KLK12Q9UKR0 248 aa6.47□□□□□ -1.37
HNRNPC-228ENST00000557033 MUC21A0A0G2JKD1 596 aa6.46□□□□□ -1.38
HNRNPC-228ENST00000557033 MUC21A0A140T8X8 626 aa6.46□□□□□ -1.38
HNRNPC-228ENST00000557033 BCL2P10415 239 aa6.46□□□□□ -1.38
HNRNPC-228ENST00000557033 Q8N976 141 aa6.46□□□□□ -1.38
HNRNPC-228ENST00000557033 FER1L6-AS1Q8NA97 138 aa6.46□□□□□ -1.38
HNRNPC-228ENST00000557033 OR2D3Q8NGH3 330 aa6.46□□□□□ -1.38
HNRNPC-228ENST00000557033 DNAJC30Q96LL9 226 aa6.46□□□□□ -1.38
HNRNPC-228ENST00000557033 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 H7C1H1 209 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 P01737 135 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 GZMBP10144 247 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 WFDC2Q14508 124 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 C9orf62Q8N4C0 152 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 BAALCQ8WXS3 180 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 UBE2WQ96B02 151 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 KRTAP9-4Q9BYQ2 154 aa6.45□□□□□ -1.38
HNRNPC-228ENST00000557033 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
HNRNPC-228ENST00000557033 TRBV20OR9-2A0A075B6H5 130 aa6.44□□□□□ -1.38
HNRNPC-228ENST00000557033 M0QY20 66 aa6.44□□□□□ -1.38
HNRNPC-228ENST00000557033 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
HNRNPC-228ENST00000557033 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 LECT2O14960 151 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 TRGC1P0CF51 173 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 INAFM2P0DMQ5 153 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 NDUFV3P56181 108 aaKnown RBP6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 Q5VSD8 79 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 ENHOQ6UWT2 76 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 NTM-AS1Q6ZSK4 140 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 AKAP14Q86UN6 197 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 MTURNQ8N3F0 131 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 CHCHD5Q9BSY4 110 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 FAT1Q14517 4588 aa6.43□□□□□ -1.38
HNRNPC-228ENST00000557033 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 244.7 ms