RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
PSEN1-217ENST00000556533 RBX1P62877 108 aa11.42□□□□□ -0.58
PSEN1-217ENST00000556533 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
PSEN1-217ENST00000556533 IGKV2D-24A0A075B6R9 120 aa11.41□□□□□ -0.58
PSEN1-217ENST00000556533 S100A8P05109 93 aa11.41□□□□□ -0.58
PSEN1-217ENST00000556533 HBBP68871 147 aa11.41□□□□□ -0.58
PSEN1-217ENST00000556533 MRPL51Q4U2R6 128 aaKnown RBP11.41□□□□□ -0.58
PSEN1-217ENST00000556533 FAM104BQ5XKR9 115 aa11.41□□□□□ -0.58
PSEN1-217ENST00000556533 RMI2Q96E14 147 aa11.41□□□□□ -0.58
PSEN1-217ENST00000556533 TRBV6-5A0A0K0K1A5 114 aa11.4□□□□□ -0.58
PSEN1-217ENST00000556533 I3L3M4 83 aa11.4□□□□□ -0.58
PSEN1-217ENST00000556533 CRPP02741 224 aa11.4□□□□□ -0.58
PSEN1-217ENST00000556533 LINC00862A6NCI5 91 aa11.39□□□□□ -0.59
PSEN1-217ENST00000556533 CLPSL2Q6UWE3 100 aa11.39□□□□□ -0.59
PSEN1-217ENST00000556533 ENHOQ6UWT2 76 aa11.39□□□□□ -0.59
PSEN1-217ENST00000556533 A0A1B0GXF2 115 aa11.38□□□□□ -0.59
PSEN1-217ENST00000556533 APCSP02743 223 aa11.38□□□□□ -0.59
PSEN1-217ENST00000556533 CKS2P33552 79 aa11.38□□□□□ -0.59
PSEN1-217ENST00000556533 Q0VG73 95 aa11.38□□□□□ -0.59
PSEN1-217ENST00000556533 LINC00269Q8N2A0 174 aa11.38□□□□□ -0.59
PSEN1-217ENST00000556533 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
PSEN1-217ENST00000556533 LRCOL1A6NCL2 159 aa11.37□□□□□ -0.59
PSEN1-217ENST00000556533 LECT2O14960 151 aa11.37□□□□□ -0.59
PSEN1-217ENST00000556533 PPP1R17O96001 155 aa11.37□□□□□ -0.59
PSEN1-217ENST00000556533 SEC11CQ9BY50 192 aa11.37□□□□□ -0.59
PSEN1-217ENST00000556533 TMEM242Q9NWH2 141 aa11.37□□□□□ -0.59
PSEN1-217ENST00000556533 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
PSEN1-217ENST00000556533 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
PSEN1-217ENST00000556533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-217ENST00000556533 IGKV2-29A2NJV5 120 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-217ENST00000556533 AMMECR1LQ6DCA0 310 aa11.36□□□□□ -0.59
PSEN1-217ENST00000556533 ATP5L2Q7Z4Y8 100 aa11.36□□□□□ -0.59
PSEN1-217ENST00000556533 NRACQ8N912 160 aa11.36□□□□□ -0.59
PSEN1-217ENST00000556533 BAALCQ8WXS3 180 aa11.36□□□□□ -0.59
PSEN1-217ENST00000556533 C1orf43Q9BWL3 253 aa11.36□□□□□ -0.59
PSEN1-217ENST00000556533 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
PSEN1-217ENST00000556533 IGLV4-60A0A075B6I1 120 aa11.35□□□□□ -0.59
PSEN1-217ENST00000556533 VCYO14598 125 aa11.35□□□□□ -0.59
PSEN1-217ENST00000556533 TSHBP01222 138 aa11.35□□□□□ -0.59
PSEN1-217ENST00000556533 POLR2KP53803 58 aaKnown RBP11.35□□□□□ -0.59
PSEN1-217ENST00000556533 SUMO2P61956 95 aaKnown RBP11.35□□□□□ -0.59
PSEN1-217ENST00000556533 RNASEKQ6P5S7 137 aaKnown RBP11.35□□□□□ -0.59
PSEN1-217ENST00000556533 MAPKAPK5-AS1Q8N8E1 139 aa11.35□□□□□ -0.59
PSEN1-217ENST00000556533 DYNC1H1Q14204 4646 aaKnown RBP11.35□□□□□ -0.59
PSEN1-217ENST00000556533 D6R8Y8 96 aa11.34□□□□□ -0.59
PSEN1-217ENST00000556533 C20orf203Q8NBC4 194 aa11.34□□□□□ -0.59
PSEN1-217ENST00000556533 BTF3L4Q96K17 158 aa11.34□□□□□ -0.59
PSEN1-217ENST00000556533 CTDSP1Q9GZU7 261 aa11.34□□□□□ -0.59
PSEN1-217ENST00000556533 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
PSEN1-217ENST00000556533 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
PSEN1-217ENST00000556533 FCER1GP30273 86 aa11.33□□□□□ -0.6
PSEN1-217ENST00000556533 REG3AQ06141 175 aa11.33□□□□□ -0.6
PSEN1-217ENST00000556533 WFDC2Q14508 124 aa11.33□□□□□ -0.6
PSEN1-217ENST00000556533 MIAQ16674 131 aa11.33□□□□□ -0.6
PSEN1-217ENST00000556533 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
PSEN1-217ENST00000556533 TNFRSF6BO95407 300 aa11.32□□□□□ -0.6
PSEN1-217ENST00000556533 FGF6P10767 208 aa11.32□□□□□ -0.6
PSEN1-217ENST00000556533 Q8N814 137 aa11.32□□□□□ -0.6
PSEN1-217ENST00000556533 IMMP2LQ96T52 175 aa11.32□□□□□ -0.6
PSEN1-217ENST00000556533 PRR34Q9NV39 138 aa11.32□□□□□ -0.6
PSEN1-217ENST00000556533 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
PSEN1-217ENST00000556533 TMEM136Q6ZRR5 245 aa11.31□□□□□ -0.6
PSEN1-217ENST00000556533 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
PSEN1-217ENST00000556533 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
PSEN1-217ENST00000556533 IGLV5-52A0A0A0MRZ9 124 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 H7C423 109 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 NPYP01303 97 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 HLA-DQA1P01909 254 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 PPBPP02775 128 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 C10orf91Q5T1B1 145 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 ORMDL3Q8N138 153 aa11.3□□□□□ -0.6
PSEN1-217ENST00000556533 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
PSEN1-217ENST00000556533 ESDP10768 282 aa11.29□□□□□ -0.6
PSEN1-217ENST00000556533 S100PP25815 95 aa11.29□□□□□ -0.6
PSEN1-217ENST00000556533 CDPF1Q6NVV7 123 aa11.29□□□□□ -0.6
PSEN1-217ENST00000556533 TMEM101Q96IK0 257 aa11.29□□□□□ -0.6
PSEN1-217ENST00000556533 PRELID3AQ96N28 172 aa11.29□□□□□ -0.6
PSEN1-217ENST00000556533 RPS10P5Q9NQ39 176 aa11.29□□□□□ -0.6
PSEN1-217ENST00000556533 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
PSEN1-217ENST00000556533 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-217ENST00000556533 CLRN3Q8NCR9 226 aa11.28□□□□□ -0.6
PSEN1-217ENST00000556533 OR5A1Q8NGJ0 315 aa11.27□□□□□ -0.61
PSEN1-217ENST00000556533 SMIM2Q9BVW6 85 aa11.27□□□□□ -0.61
PSEN1-217ENST00000556533 KIAA1109Q2LD37 5005 aa11.26□□□□□ -0.61
PSEN1-217ENST00000556533 TRAV8-4A0A0B4J246 113 aa11.26□□□□□ -0.61
PSEN1-217ENST00000556533 LOC389332A0A1B0GUA5 103 aa11.26□□□□□ -0.61
PSEN1-217ENST00000556533 PHOX2AO14813 284 aa11.26□□□□□ -0.61
PSEN1-217ENST00000556533 APOC3P02656 99 aa11.26□□□□□ -0.61
PSEN1-217ENST00000556533 GCSHP23434 173 aa11.26□□□□□ -0.61
PSEN1-217ENST00000556533 DGAT2L7PQ6IED9 249 aa11.26□□□□□ -0.61
PSEN1-217ENST00000556533 NTN5Q8WTR8 489 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-217ENST00000556533 TCAPO15273 167 aa11.25□□□□□ -0.61
PSEN1-217ENST00000556533 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-217ENST00000556533 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
PSEN1-217ENST00000556533 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
PSEN1-217ENST00000556533 RHEBQ15382 184 aa11.25□□□□□ -0.61
PSEN1-217ENST00000556533 NDUFA5Q16718 116 aa11.25□□□□□ -0.61
PSEN1-217ENST00000556533 TRAV9-1A0A075B6T8 112 aa11.24□□□□□ -0.61
PSEN1-217ENST00000556533 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms