RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 A0A0J9YY99 117 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 TMEM223A0PJW6 202 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 J3QQQ9 107 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 LEPROTO15243 131 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 RS1O15537 224 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 IGHV3-53P01767 116 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 CD28P10747 220 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 PLA2G2AP14555 144 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 ZNF22P17026 224 aaPredicted RBP3.92□□□□□ -1.78
GPHN-213ENST00000556501 KRTAP1-1Q07627 177 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 RNF151Q2KHN1 245 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 TMEM170BQ5T4T1 132 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 CFAP126Q5VTH2 177 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 WFDC11Q8NEX6 87 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 IL17DQ8TAD2 202 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 DNAJC30Q96LL9 226 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
GPHN-213ENST00000556501 SPANXA1Q9NS26 97 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 TLN2Q9Y4G6 2542 aa3.92□□□□□ -1.78
GPHN-213ENST00000556501 BAHCC1Q9P281 2608 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 SORL1Q92673 2214 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 IGHV3-73A0A0B4J1V6 119 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 A0A0J9YXV3 536 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 J3QKU1 62 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 SAP30O75446 220 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 HTN1P15515 57 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 LGALS3P17931 250 aaKnown RBP3.91□□□□□ -1.78
GPHN-213ENST00000556501 MRPS36P82909 103 aaKnown RBP3.91□□□□□ -1.78
GPHN-213ENST00000556501 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.78
GPHN-213ENST00000556501 Q6ZSN1 163 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 SLC25A29Q8N8R3 303 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 FAM104AQ969W3 186 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 LINC01587Q99440 93 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 CHCHD7Q9BUK0 85 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 VCX2Q9H322 139 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 C16orf95Q9H693 158 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 ESM1Q9NQ30 184 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 MRPL16Q9NX20 251 aaKnown RBP3.91□□□□□ -1.78
GPHN-213ENST00000556501 TNFRSF18Q9Y5U5 241 aa3.91□□□□□ -1.78
GPHN-213ENST00000556501 G3V4G9 280 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 CCL24O00175 119 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 TSPAN13O95857 204 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 IGHV3-30P01768 117 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 RNASE1P07998 156 aaKnown RBP3.9□□□□□ -1.79
GPHN-213ENST00000556501 IGHV3-30-5P0DP03 117 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 PROK1P58294 105 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 LYRM7Q5U5X0 104 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 C1orf158Q8N1D5 194 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 VPS25Q9BRG1 176 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 TIMM21Q9BVV7 248 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 C1orf43Q9BWL3 253 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 PRO0461Q9UI25 63 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 TEX15Q9BXT5 2789 aa3.9□□□□□ -1.79
GPHN-213ENST00000556501 NOTCH2Q04721 2471 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 CSMD1Q96PZ7 3565 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 MXRA5Q9NR99 2828 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 TINCRA0A1B0GVN0 87 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 A0A1W2PRX2 142 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 TMEM238C9JI98 176 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 F8W1H4 67 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 PRM2P04554 102 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 PCP4P48539 62 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 CMC4P56277 68 aaPredicted RBP3.89□□□□□ -1.79
GPHN-213ENST00000556501 UBE2D3P61077 147 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 UBE2D2P62837 147 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 COTL1Q14019 142 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 HIST2H2BDQ6DRA6 164 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 Q6ZUT4 128 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 NDUFA11Q86Y39 141 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 STHQ8IWL8 128 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 FAM110AQ9BQ89 295 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 XCL2Q9UBD3 114 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 TSSC4Q9Y5U2 329 aaPredicted RBP3.89□□□□□ -1.79
GPHN-213ENST00000556501 PDZD2O15018 2839 aa3.89□□□□□ -1.79
GPHN-213ENST00000556501 SONP18583 2426 aaKnown RBP3.89□□□□□ -1.79
GPHN-213ENST00000556501 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.88□□□□□ -1.79
GPHN-213ENST00000556501 IGLV5-45A0A087WSX0 123 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 A0A0B4J2C4 111 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 TRBV10-1A0A0K0K1A3 114 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 IGKV2-29A2NJV5 120 aaPredicted RBP3.88□□□□□ -1.79
GPHN-213ENST00000556501 H3BMG7 143 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 CFC1BP0CG36 223 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 CFC1P0CG37 223 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 IGHV3-30-3P0DP02 117 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 AZU1P20160 251 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 RPL24P83731 157 aaKnown RBP3.88□□□□□ -1.79
GPHN-213ENST00000556501 GAGE13Q4V321 117 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 CEMP1Q6PRD7 247 aaPredicted RBP3.88□□□□□ -1.79
GPHN-213ENST00000556501 C10orf126Q8N4M7 172 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 C11orf44Q8N8P7 122 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 LINC01006Q8NI28 216 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 TMEM263Q8WUH6 116 aaKnown RBP3.88□□□□□ -1.79
GPHN-213ENST00000556501 CITED2Q99967 270 aaPredicted RBP3.88□□□□□ -1.79
GPHN-213ENST00000556501 YAE1D1Q9NRH1 226 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 Q9UF83 564 aa3.88□□□□□ -1.79
GPHN-213ENST00000556501 IGHV3-64A0A075B6Q5 118 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 TRGV1A0A0A0MS02 117 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms