RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 LY6EQ16553 131 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 TMEM170BQ5T4T1 132 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 TRPT1Q86TN4 253 aaKnown RBP3.28□□□□□ -1.88
ATXN3-241ENST00000556374 ZFAND2AQ8N6M9 145 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 NEXN-AS1Q8NBZ9 246 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 ODF3Q96PU9 254 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 HHLA3Q9XRX5 114 aa3.28□□□□□ -1.88
ATXN3-241ENST00000556374 MALRD1Q5VYJ5 2156 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 TRBV7-3A0A075B6L6 115 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 TEX48A0A1B0GUV7 120 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 A0A1B0GV72 72 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 A0A1B0GWB2 263 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 K7EMT4 169 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 SOCS3O14543 225 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 NXPH4O95158 308 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 GAS8-AS1O95177 125 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 APOMO95445 188 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 IGHG2P01859 326 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 MSMBP08118 114 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 LGALS1P09382 135 aaKnown RBP3.27□□□□□ -1.89
ATXN3-241ENST00000556374 CD7P09564 240 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 ODF3L2Q3SX64 289 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 PRR9Q5T870 116 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 FAM74A4Q5TZK3 123 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 UNQ9165/PRO28630Q6UXU0 137 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 BRD3OSQ6XYD6 125 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 FOXI2Q6ZQN5 318 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 APRG1Q8IVJ8 170 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 ATP6V0E2Q8NHE4 81 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 RASL10AQ92737 203 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 RPL39LQ96EH5 51 aaKnown RBP3.27□□□□□ -1.89
ATXN3-241ENST00000556374 TIMM17AQ99595 171 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 RHPN1-AS1Q9BWJ2 59 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 TTTY13Q9BZ97 58 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 LINC00527Q9UJ94 153 aa3.27□□□□□ -1.89
ATXN3-241ENST00000556374 TENM1Q9UKZ4 2725 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 EPPK1P58107 5090 aaKnown RBP3.26□□□□□ -1.89
ATXN3-241ENST00000556374 TRBV20-1A0A075B6N2 111 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-241ENST00000556374 A6NDX4 124 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 C11orf86A6NJI1 115 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 TMEM238C9JI98 176 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 H3BMG7 143 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 IGHV4-39P01824 125 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 SCGB1C2P0DMR2 95 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 PSMB2P49721 201 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 ATP5J2P56134 94 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 Q1RN00 199 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 NSUN5P1Q3KNT7 163 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 ZFP2Q6ZN57 461 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 MAPKAPK5-AS1Q8N8E1 139 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 PLEKHB2Q96CS7 222 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 DUX5Q96PT3 197 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 SIGMAR1Q99720 223 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 C1QTNF4Q9BXJ3 329 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 YAE1D1Q9NRH1 226 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 SPANXB1Q9NS25 103 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-241ENST00000556374 MDFICQ9P1T7 246 aa3.26□□□□□ -1.89
ATXN3-241ENST00000556374 ZNF256Q9Y2P7 627 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-241ENST00000556374 TNCP24821 2201 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 ARFGEF3Q5TH69 2177 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 TRAV12-3A0A0B4J271 114 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 A0A1W2PPR1 153 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 TMEM89A2RUT3 159 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 SDHAF1A6NFY7 115 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 A8MWV9 139 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 KLLNB2CW77 178 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 B4DSR2 109 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 F6UB75 175 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 LGALS9O00182 355 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 GNRH2O43555 120 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 CIDEAO60543 219 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 TRBV12-3P01733 135 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 PRSS2P07478 247 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 ZNF688P0C7X2 276 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 CD28P10747 220 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
ATXN3-241ENST00000556374 ZNF415Q09FC8 603 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 MTURNQ8N3F0 131 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 POM121L12Q8N7R1 296 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 C10orf105Q8TEF2 133 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 PHLDA1Q8WV24 401 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-241ENST00000556374 FAM19A4Q96LR4 140 aa3.25□□□□□ -1.89
ATXN3-241ENST00000556374 TSSC4Q9Y5U2 329 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-241ENST00000556374 IGHV4OR15-8A0A075B7B6 117 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 IGHV1OR15-1A0A075B7D0 117 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 A0A087WW49 117 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 IGHV4-61A0A0C4DH41 118 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 TRBV6-5A0A0K0K1A5 114 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 TRBV27A0A0K0K1C4 114 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 I3L3M4 83 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 J3QLI3 93 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 J3QQQ9 107 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 LEPROTO15243 131 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 TSPAN13O95857 204 aa3.24□□□□□ -1.89
ATXN3-241ENST00000556374 IGHV4-38-2P0DP08 117 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms