RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 AP5S1Q9NUS5 200 aa8.97□□□□□ -0.97
CHMP4BP1-201ENST00000556017 RAB19A4D1S5 217 aa8.96□□□□□ -0.98
CHMP4BP1-201ENST00000556017 CACNG7P62955 275 aa8.96□□□□□ -0.98
CHMP4BP1-201ENST00000556017 A0A096LNI7 61 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 HMSDA8MTL9 139 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 NTF3P20783 257 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 CTRLP40313 264 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 GATD1Q8NB37 220 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 DPH3Q96FX2 82 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 CNFNQ9BYD5 112 aa8.95□□□□□ -0.98
CHMP4BP1-201ENST00000556017 GVQW2A0A096LPI5 108 aaPredicted RBP8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 TRAV1-1A0A0B4J248 108 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 BCL2L11O43521 198 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 AMTP48728 403 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 RPS20P60866 119 aaKnown RBP8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 Q6ZNX1 250 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 C9orf62Q8N4C0 152 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 DPH3P1Q9H4G8 78 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 BATF3Q9NR55 127 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 GNG13Q9P2W3 67 aa8.94□□□□□ -0.98
CHMP4BP1-201ENST00000556017 LPAP08519 4548 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 TRAV26-2A0A0B4J265 109 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 A0A0J9YXV3 536 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 F2Z2F3 143 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 SRSF9Q13242 221 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 COTL1Q14019 142 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 MAJINQ3KP22 176 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 STPG4Q8N801 248 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 C7orf33Q8WU49 177 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 CHCHD10Q8WYQ3 142 aaPredicted RBP8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 MANBALQ9NQG1 85 aa8.93□□□□□ -0.98
CHMP4BP1-201ENST00000556017 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 TRGC1P0CF51 173 aa8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 SULT1A2P50226 295 aa8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 FOXI1Q12951 378 aa8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 WDR73Q6P4I2 378 aa8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 RPL39LQ96EH5 51 aaKnown RBP8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 SMIM12Q96EX1 92 aa8.92□□□□□ -0.98
CHMP4BP1-201ENST00000556017 FOXA3P55318 350 aaPredicted RBP8.91□□□□□ -0.98
CHMP4BP1-201ENST00000556017 NUDT10Q8NFP7 164 aa8.91□□□□□ -0.98
CHMP4BP1-201ENST00000556017 LYPD6BQ8NI32 183 aa8.91□□□□□ -0.98
CHMP4BP1-201ENST00000556017 NUDT11Q96G61 164 aa8.91□□□□□ -0.98
CHMP4BP1-201ENST00000556017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 IGKV2-29A2NJV5 120 aaPredicted RBP8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 FAM231BA6NCW3 169 aa8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 UBE2L6O14933 153 aa8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 IFNA1P01562 189 aa8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 GNG4P50150 75 aa8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 CFAP161Q6P656 301 aa8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 LINC00526Q96FQ7 95 aa8.9□□□□□ -0.98
CHMP4BP1-201ENST00000556017 K7EN84 100 aa8.89□□□□□ -0.99
CHMP4BP1-201ENST00000556017 GAS8-AS1O95177 125 aa8.88□□□□□ -0.99
CHMP4BP1-201ENST00000556017 FGF6P10767 208 aa8.88□□□□□ -0.99
CHMP4BP1-201ENST00000556017 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
CHMP4BP1-201ENST00000556017 RGS21Q2M5E4 152 aa8.88□□□□□ -0.99
CHMP4BP1-201ENST00000556017 KANTRA0A1W2PQU2 76 aa8.87□□□□□ -0.99
CHMP4BP1-201ENST00000556017 XKRY2A2RUG3 117 aa8.87□□□□□ -0.99
CHMP4BP1-201ENST00000556017 SPINK6Q6UWN8 80 aa8.87□□□□□ -0.99
CHMP4BP1-201ENST00000556017 RNASE7Q9H1E1 156 aaKnown RBP8.87□□□□□ -0.99
CHMP4BP1-201ENST00000556017 SDHAF1A6NFY7 115 aa8.86□□□□□ -0.99
CHMP4BP1-201ENST00000556017 H7C423 109 aa8.86□□□□□ -0.99
CHMP4BP1-201ENST00000556017 NCR2O95944 276 aa8.86□□□□□ -0.99
CHMP4BP1-201ENST00000556017 ESDP10768 282 aa8.86□□□□□ -0.99
CHMP4BP1-201ENST00000556017 TWIST1Q15672 202 aa8.86□□□□□ -0.99
CHMP4BP1-201ENST00000556017 OR5A1Q8NGJ0 315 aa8.86□□□□□ -0.99
CHMP4BP1-201ENST00000556017 LINC00959A0A1B0GUT2 108 aa8.85□□□□□ -0.99
CHMP4BP1-201ENST00000556017 PDE6DO43924 150 aa8.85□□□□□ -0.99
CHMP4BP1-201ENST00000556017 RNASEKQ6P5S7 137 aaKnown RBP8.85□□□□□ -0.99
CHMP4BP1-201ENST00000556017 MED9Q9NWA0 146 aa8.85□□□□□ -0.99
CHMP4BP1-201ENST00000556017 CCL25O15444 150 aa8.84□□□□□ -0.99
CHMP4BP1-201ENST00000556017 TSHBP01222 138 aa8.84□□□□□ -0.99
CHMP4BP1-201ENST00000556017 BCL2P10415 239 aa8.84□□□□□ -0.99
CHMP4BP1-201ENST00000556017 XCL1P47992 114 aa8.84□□□□□ -0.99
CHMP4BP1-201ENST00000556017 AMMECR1LQ6DCA0 310 aa8.84□□□□□ -0.99
CHMP4BP1-201ENST00000556017 OCC1Q8TAD7 63 aa8.84□□□□□ -0.99
CHMP4BP1-201ENST00000556017 RPP21Q9H633 154 aaKnown RBP8.84□□□□□ -0.99
CHMP4BP1-201ENST00000556017 TRBV6-5A0A0K0K1A5 114 aa8.83□□□□□ -1
CHMP4BP1-201ENST00000556017 APCSP02743 223 aa8.83□□□□□ -1
CHMP4BP1-201ENST00000556017 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
CHMP4BP1-201ENST00000556017 EIF5AP63241 154 aaKnown RBP8.83□□□□□ -1
CHMP4BP1-201ENST00000556017 IGHV1-58A0A0C4DH39 117 aa8.82□□□□□ -1
CHMP4BP1-201ENST00000556017 A0A1W2PNN7 141 aa8.82□□□□□ -1
CHMP4BP1-201ENST00000556017 Q6ZRP5 223 aa8.82□□□□□ -1
CHMP4BP1-201ENST00000556017 CARD19Q96LW7 228 aa8.82□□□□□ -1
CHMP4BP1-201ENST00000556017 BIN3Q9NQY0 253 aa8.82□□□□□ -1
CHMP4BP1-201ENST00000556017 PTTG1IPP53801 180 aa8.81□□□□□ -1
CHMP4BP1-201ENST00000556017 REG3GQ6UW15 175 aa8.81□□□□□ -1
CHMP4BP1-201ENST00000556017 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
CHMP4BP1-201ENST00000556017 LINC00474Q9P2X8 69 aa8.81□□□□□ -1
CHMP4BP1-201ENST00000556017 I3L3M4 83 aa8.8□□□□□ -1
CHMP4BP1-201ENST00000556017 POLR2KP53803 58 aaKnown RBP8.8□□□□□ -1
CHMP4BP1-201ENST00000556017 SYCNQ0VAF6 134 aa8.8□□□□□ -1
CHMP4BP1-201ENST00000556017 MRPL52Q86TS9 123 aaKnown RBP8.8□□□□□ -1
CHMP4BP1-201ENST00000556017 TMEM242Q9NWH2 141 aa8.8□□□□□ -1
CHMP4BP1-201ENST00000556017 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms