RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 PKIGQ9Y2B9 76 aa10.75□□□□□ -0.69
XRCC3-215ENST00000555964 RAB5CP51148 216 aa10.74□□□□□ -0.69
XRCC3-215ENST00000555964 CENPWQ5EE01 88 aa10.74□□□□□ -0.69
XRCC3-215ENST00000555964 KANTRA0A1W2PQU2 76 aa10.73□□□□□ -0.69
XRCC3-215ENST00000555964 PHOX2AO14813 284 aa10.73□□□□□ -0.69
XRCC3-215ENST00000555964 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
XRCC3-215ENST00000555964 SLPIP03973 132 aa10.73□□□□□ -0.69
XRCC3-215ENST00000555964 RPS10P46783 165 aaKnown RBP10.73□□□□□ -0.69
XRCC3-215ENST00000555964 TEX46H3BTG2 121 aa10.72□□□□□ -0.69
XRCC3-215ENST00000555964 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
XRCC3-215ENST00000555964 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
XRCC3-215ENST00000555964 IFNA1P01562 189 aa10.71□□□□□ -0.69
XRCC3-215ENST00000555964 GNG4P50150 75 aa10.71□□□□□ -0.69
XRCC3-215ENST00000555964 COX6A2Q02221 97 aa10.71□□□□□ -0.69
XRCC3-215ENST00000555964 C15orf56Q8N910 161 aa10.71□□□□□ -0.69
XRCC3-215ENST00000555964 GNG13Q9P2W3 67 aa10.71□□□□□ -0.69
XRCC3-215ENST00000555964 C19orf71A6NCJ1 209 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 HMSDA8MTL9 139 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 BCL2L11O43521 198 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 CCL20P78556 96 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 MAJINQ3KP22 176 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 AMMECR1LQ6DCA0 310 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 GTSF1Q8WW33 167 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 LINC00474Q9P2X8 69 aa10.7□□□□□ -0.7
XRCC3-215ENST00000555964 RGS21Q2M5E4 152 aa10.69□□□□□ -0.7
XRCC3-215ENST00000555964 LINC01600Q96MT4 127 aa10.69□□□□□ -0.7
XRCC3-215ENST00000555964 GVQW2A0A096LPI5 108 aaPredicted RBP10.68□□□□□ -0.7
XRCC3-215ENST00000555964 TRAV1-1A0A0B4J248 108 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 IGKV2-24A0A0C4DH68 120 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 H7C423 109 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 PDE6DO43924 150 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 NCR2O95944 276 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 NTF3P20783 257 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 PRR3P79522 188 aaKnown RBP10.68□□□□□ -0.7
XRCC3-215ENST00000555964 LYZL1Q6UWQ5 148 aa10.68□□□□□ -0.7
XRCC3-215ENST00000555964 SMLR1H3BR10 107 aa10.67□□□□□ -0.7
XRCC3-215ENST00000555964 CTRLP40313 264 aa10.67□□□□□ -0.7
XRCC3-215ENST00000555964 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
XRCC3-215ENST00000555964 REG3GQ6UW15 175 aa10.67□□□□□ -0.7
XRCC3-215ENST00000555964 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
XRCC3-215ENST00000555964 STPG4Q8N801 248 aa10.67□□□□□ -0.7
XRCC3-215ENST00000555964 CHCHD10Q8WYQ3 142 aaPredicted RBP10.67□□□□□ -0.7
XRCC3-215ENST00000555964 MEF2BQ02080 365 aaPredicted RBP10.66□□□□□ -0.7
XRCC3-215ENST00000555964 TWIST1Q15672 202 aa10.66□□□□□ -0.7
XRCC3-215ENST00000555964 EIF5AL1Q6IS14 154 aaKnown RBP10.66□□□□□ -0.7
XRCC3-215ENST00000555964 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
XRCC3-215ENST00000555964 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
XRCC3-215ENST00000555964 APCSP02743 223 aa10.65□□□□□ -0.7
XRCC3-215ENST00000555964 RNASEKQ6P5S7 137 aaKnown RBP10.65□□□□□ -0.7
XRCC3-215ENST00000555964 TEX261Q6UWH6 196 aa10.65□□□□□ -0.7
XRCC3-215ENST00000555964 CNFNQ9BYD5 112 aa10.65□□□□□ -0.7
XRCC3-215ENST00000555964 TNXBP22105 4242 aa10.64□□□□□ -0.71
XRCC3-215ENST00000555964 ZNF25P17030 456 aaPredicted RBP10.64□□□□□ -0.71
XRCC3-215ENST00000555964 SPINK6Q6UWN8 80 aa10.64□□□□□ -0.71
XRCC3-215ENST00000555964 RAB19A4D1S5 217 aa10.63□□□□□ -0.71
XRCC3-215ENST00000555964 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
XRCC3-215ENST00000555964 BTF3L4Q96K17 158 aa10.63□□□□□ -0.71
XRCC3-215ENST00000555964 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
XRCC3-215ENST00000555964 A0A0J9YXV3 536 aa10.62□□□□□ -0.71
XRCC3-215ENST00000555964 LYPD6BQ8NI32 183 aa10.62□□□□□ -0.71
XRCC3-215ENST00000555964 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
XRCC3-215ENST00000555964 A0A096LNI7 61 aa10.61□□□□□ -0.71
XRCC3-215ENST00000555964 IGHV1-58A0A0C4DH39 117 aa10.61□□□□□ -0.71
XRCC3-215ENST00000555964 FGF6P10767 208 aa10.61□□□□□ -0.71
XRCC3-215ENST00000555964 TAGLN2P37802 199 aaKnown RBP10.61□□□□□ -0.71
XRCC3-215ENST00000555964 Q6ZNX1 250 aa10.61□□□□□ -0.71
XRCC3-215ENST00000555964 OR5A1Q8NGJ0 315 aa10.61□□□□□ -0.71
XRCC3-215ENST00000555964 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
XRCC3-215ENST00000555964 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.6□□□□□ -0.71
XRCC3-215ENST00000555964 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
XRCC3-215ENST00000555964 IGKV2-29A2NJV5 120 aaPredicted RBP10.6□□□□□ -0.71
XRCC3-215ENST00000555964 FOXI1Q12951 378 aa10.6□□□□□ -0.71
XRCC3-215ENST00000555964 Q6ZRP5 223 aa10.6□□□□□ -0.71
XRCC3-215ENST00000555964 NUDT10Q8NFP7 164 aa10.6□□□□□ -0.71
XRCC3-215ENST00000555964 NUDT11Q96G61 164 aa10.6□□□□□ -0.71
XRCC3-215ENST00000555964 CARD19Q96LW7 228 aa10.6□□□□□ -0.71
XRCC3-215ENST00000555964 FAM210AQ96ND0 272 aa10.6□□□□□ -0.71
XRCC3-215ENST00000555964 TRBV20OR9-2A0A075B6H5 130 aa10.59□□□□□ -0.71
XRCC3-215ENST00000555964 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
XRCC3-215ENST00000555964 BCL2P10415 239 aa10.59□□□□□ -0.71
XRCC3-215ENST00000555964 LRP2P98164 4655 aa10.59□□□□□ -0.71
XRCC3-215ENST00000555964 I3L3M4 83 aa10.58□□□□□ -0.72
XRCC3-215ENST00000555964 XCL1P47992 114 aa10.58□□□□□ -0.72
XRCC3-215ENST00000555964 RPL39LQ96EH5 51 aaKnown RBP10.58□□□□□ -0.72
XRCC3-215ENST00000555964 ZNF561-AS1K7EIQ3 104 aa10.57□□□□□ -0.72
XRCC3-215ENST00000555964 SS18Q15532 418 aa10.57□□□□□ -0.72
XRCC3-215ENST00000555964 ISOC2Q96AB3 205 aa10.57□□□□□ -0.72
XRCC3-215ENST00000555964 PMCHP20382 165 aa10.56□□□□□ -0.72
XRCC3-215ENST00000555964 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
XRCC3-215ENST00000555964 LINC00959A0A1B0GUT2 108 aa10.55□□□□□ -0.72
XRCC3-215ENST00000555964 CCL25O15444 150 aa10.55□□□□□ -0.72
XRCC3-215ENST00000555964 SYCNQ0VAF6 134 aa10.55□□□□□ -0.72
XRCC3-215ENST00000555964 RNASE7Q9H1E1 156 aaKnown RBP10.55□□□□□ -0.72
XRCC3-215ENST00000555964 TRBV6-5A0A0K0K1A5 114 aa10.54□□□□□ -0.72
XRCC3-215ENST00000555964 KRTAP10-8P60410 259 aa10.54□□□□□ -0.72
XRCC3-215ENST00000555964 CD164L2Q6UWJ8 174 aa10.54□□□□□ -0.72
XRCC3-215ENST00000555964 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
XRCC3-215ENST00000555964 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
XRCC3-215ENST00000555964 LOC107984640A0A0U1RRK4 108 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms