RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CFAP126Q5VTH2 177 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 C10orf126Q8N4M7 172 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 MAPK1IP1LQ8NDC0 245 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 RAX2Q96IS3 184 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 AMELXQ99217 191 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 SPAG8Q99932 426 aaPredicted RBP5.14□□□□□ -1.59
TDP1-213ENST00000555880 PYGO1Q9Y3Y4 419 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 VPS13CQ709C8 3753 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 ZFHX3Q15911 3703 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 ZNF462Q96JM2 2506 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.13□□□□□ -1.59
TDP1-213ENST00000555880 IGHV3-73A0A0B4J1V6 119 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 A0A0J9YXV3 536 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 FSHBP01225 129 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 CFC1BP0CG36 223 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 CFC1P0CG37 223 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 AZU1P20160 251 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 SLURP1P55000 103 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 KHDC1LQ5JSQ8 128 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 DYNLRB2Q8TF09 96 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 ZNF418Q8TF45 676 aaPredicted RBP5.13□□□□□ -1.59
TDP1-213ENST00000555880 SPATA25Q9BR10 227 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 TIMM21Q9BVV7 248 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 GTSF1LQ9H1H1 148 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 MXRA5Q9NR99 2828 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 NAV2Q8IVL1 2488 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 IGHV3-64A0A075B6Q5 118 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 H3BMM0 161 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 IGHV4-31P0DP07 118 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 DEFB136Q30KP8 78 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 C4orf3Q8WVX3 66 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 SPANXA1Q9NS26 97 aa5.13□□□□□ -1.59
TDP1-213ENST00000555880 A4D1N5 150 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 A8MTW9 85 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 EIF4EBP3O60516 100 aaPredicted RBP5.12□□□□□ -1.59
TDP1-213ENST00000555880 INSP01308 110 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 RBMY1A1P0DJD3 496 aaKnown RBP5.12□□□□□ -1.59
TDP1-213ENST00000555880 RBMY1CP0DJD4 496 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 SMAGPQ0VAQ4 97 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 FOXI1Q12951 378 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 RBMY1FQ15415 496 aaKnown RBP5.12□□□□□ -1.59
TDP1-213ENST00000555880 PTH2Q96A98 100 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 LINC01587Q99440 93 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 SPXQ9BT56 116 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 ERG28Q9UKR5 140 aa5.12□□□□□ -1.59
TDP1-213ENST00000555880 ABCA12Q86UK0 2595 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 A0A0B4J2C4 111 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 TCL1BO95988 128 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 IGHV3-30-3P0DP02 117 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 KRTAP10-9P60411 292 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 MRPS36P82909 103 aaKnown RBP5.11□□□□□ -1.59
TDP1-213ENST00000555880 Q1RN00 199 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 TEN1Q86WV5 123 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 TMEM61Q8N0U2 210 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 Q8N2B8 174 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 PPDPFLQ8WWR9 84 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 DNAJC30Q96LL9 226 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 Q96MF0 132 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 PTPN13Q12923 2485 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 CR1P17927 2039 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 A0A0J9YXY3 114 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 PLA2G2AP14555 144 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 MUSTN1Q8IVN3 82 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 TEX29Q8N6K0 151 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 LINC00467Q9BRT7 94 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 MAP6D1Q9H9H5 199 aa5.11□□□□□ -1.59
TDP1-213ENST00000555880 PRRC2AP48634 2157 aaKnown RBP5.11□□□□□ -1.59
TDP1-213ENST00000555880 NACAE9PAV3 2078 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 TINCRA0A1B0GVN0 87 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 RBMY1BA6NDE4 496 aaKnown RBP5.1□□□□□ -1.59
TDP1-213ENST00000555880 RBMY1EA6NEQ0 496 aaKnown RBP5.1□□□□□ -1.59
TDP1-213ENST00000555880 H7C2G1 150 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 IGHV3-33P01772 117 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 RBMY1DP0C7P1 496 aaKnown RBP5.1□□□□□ -1.59
TDP1-213ENST00000555880 INSL3P51460 131 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 PROK1P58294 105 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 C18orf65Q6ZTR6 163 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 TMEM263Q8WUH6 116 aaKnown RBP5.1□□□□□ -1.59
TDP1-213ENST00000555880 GEMIN7Q9H840 131 aaKnown RBP5.1□□□□□ -1.59
TDP1-213ENST00000555880 TEX15Q9BXT5 2789 aa5.1□□□□□ -1.59
TDP1-213ENST00000555880 GCN1Q92616 2671 aaKnown RBP5.1□□□□□ -1.59
TDP1-213ENST00000555880 UBR5O95071 2799 aaPredicted RBP5.1□□□□□ -1.59
TDP1-213ENST00000555880 IGHV1-58A0A0C4DH39 117 aa5.09□□□□□ -1.59
TDP1-213ENST00000555880 IGHV3-53P01767 116 aa5.09□□□□□ -1.59
TDP1-213ENST00000555880 PRSS2P07478 247 aa5.09□□□□□ -1.59
TDP1-213ENST00000555880 DGAT2L7PQ6IED9 249 aa5.09□□□□□ -1.59
TDP1-213ENST00000555880 CEMP1Q6PRD7 247 aaPredicted RBP5.09□□□□□ -1.59
TDP1-213ENST00000555880 NDUFA12Q9UI09 145 aa5.09□□□□□ -1.59
TDP1-213ENST00000555880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.09□□□□□ -1.6
TDP1-213ENST00000555880 IGKV2-29A2NJV5 120 aaPredicted RBP5.09□□□□□ -1.6
TDP1-213ENST00000555880 ATXN8Q156A1 80 aa5.09□□□□□ -1.6
TDP1-213ENST00000555880 DEFB114Q30KQ6 69 aa5.09□□□□□ -1.6
TDP1-213ENST00000555880 BEAN1Q3B7T3 259 aa5.09□□□□□ -1.6
TDP1-213ENST00000555880 RNASE13Q5GAN3 156 aaKnown RBP5.09□□□□□ -1.6
TDP1-213ENST00000555880 VSIG2Q96IQ7 327 aa5.09□□□□□ -1.6
TDP1-213ENST00000555880 CHCHD7Q9BUK0 85 aa5.09□□□□□ -1.6
TDP1-213ENST00000555880 YAE1D1Q9NRH1 226 aa5.09□□□□□ -1.6
TDP1-213ENST00000555880 UBE2D4Q9Y2X8 147 aa5.09□□□□□ -1.6
TDP1-213ENST00000555880 TRAV8-3A0A0A6YYJ7 113 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms