RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 C1orf43Q9BWL3 253 aa15.31■□□□□ 0.04
CDKN3-208ENST00000555837 IGKV2D-24A0A075B6R9 120 aa15.3■□□□□ 0.04
CDKN3-208ENST00000555837 APCSP02743 223 aa15.3■□□□□ 0.04
CDKN3-208ENST00000555837 CAMPP49913 170 aa15.3■□□□□ 0.04
CDKN3-208ENST00000555837 GAGE6Q13070 117 aa15.3■□□□□ 0.04
CDKN3-208ENST00000555837 AMN1Q8IY45 258 aa15.3■□□□□ 0.04
CDKN3-208ENST00000555837 RBX1P62877 108 aa15.29■□□□□ 0.04
CDKN3-208ENST00000555837 Q8N3U1 123 aa15.29■□□□□ 0.04
CDKN3-208ENST00000555837 RPL39LQ96EH5 51 aaKnown RBP15.29■□□□□ 0.04
CDKN3-208ENST00000555837 SMAGPQ0VAQ4 97 aa15.28■□□□□ 0.04
CDKN3-208ENST00000555837 FAM104BQ5XKR9 115 aa15.28■□□□□ 0.04
CDKN3-208ENST00000555837 TMEM218A2RU14 115 aa15.27■□□□□ 0.04
CDKN3-208ENST00000555837 TCAPO15273 167 aa15.27■□□□□ 0.04
CDKN3-208ENST00000555837 RNF185Q96GF1 192 aa15.27■□□□□ 0.04
CDKN3-208ENST00000555837 VCYO14598 125 aa15.26■□□□□ 0.03
CDKN3-208ENST00000555837 PPBPP02775 128 aa15.26■□□□□ 0.03
CDKN3-208ENST00000555837 AMMECR1LQ6DCA0 310 aa15.26■□□□□ 0.03
CDKN3-208ENST00000555837 Q8N976 141 aa15.26■□□□□ 0.03
CDKN3-208ENST00000555837 TRAV8-4A0A0B4J246 113 aa15.25■□□□□ 0.03
CDKN3-208ENST00000555837 CKS2P33552 79 aa15.25■□□□□ 0.03
CDKN3-208ENST00000555837 C14orf177Q52M58 125 aa15.25■□□□□ 0.03
CDKN3-208ENST00000555837 KIR2DL4Q99706 377 aa15.25■□□□□ 0.03
CDKN3-208ENST00000555837 TMEM70Q9BUB7 260 aa15.25■□□□□ 0.03
CDKN3-208ENST00000555837 SEC11CQ9BY50 192 aa15.25■□□□□ 0.03
CDKN3-208ENST00000555837 TRBV27A0A0K0K1C4 114 aa15.24■□□□□ 0.03
CDKN3-208ENST00000555837 LRCOL1A6NCL2 159 aa15.24■□□□□ 0.03
CDKN3-208ENST00000555837 MRPL54Q6P161 138 aaKnown RBP15.24■□□□□ 0.03
CDKN3-208ENST00000555837 BTF3L4Q96K17 158 aa15.24■□□□□ 0.03
CDKN3-208ENST00000555837 IMMP2LQ96T52 175 aa15.24■□□□□ 0.03
CDKN3-208ENST00000555837 CTDSP1Q9GZU7 261 aa15.24■□□□□ 0.03
CDKN3-208ENST00000555837 PRR34Q9NV39 138 aa15.24■□□□□ 0.03
CDKN3-208ENST00000555837 ZNF25P17030 456 aaPredicted RBP15.23■□□□□ 0.03
CDKN3-208ENST00000555837 KRTAP10-2P60368 255 aa15.23■□□□□ 0.03
CDKN3-208ENST00000555837 SUMO2P61956 95 aaKnown RBP15.23■□□□□ 0.03
CDKN3-208ENST00000555837 COMMD7Q86VX2 200 aa15.23■□□□□ 0.03
CDKN3-208ENST00000555837 LINC00269Q8N2A0 174 aa15.23■□□□□ 0.03
CDKN3-208ENST00000555837 Q8N814 137 aa15.23■□□□□ 0.03
CDKN3-208ENST00000555837 C20orf78Q9BR46 151 aa15.23■□□□□ 0.03
CDKN3-208ENST00000555837 PKD1P98161 4303 aa15.23■□□□□ 0.03
CDKN3-208ENST00000555837 FCER1GP30273 86 aa15.22■□□□□ 0.03
CDKN3-208ENST00000555837 ENHOQ6UWT2 76 aa15.22■□□□□ 0.03
CDKN3-208ENST00000555837 TMEM101Q96IK0 257 aa15.22■□□□□ 0.03
CDKN3-208ENST00000555837 A0A1B0GXF2 115 aa15.21■□□□□ 0.03
CDKN3-208ENST00000555837 CDK2AP2O75956 126 aa15.21■□□□□ 0.03
CDKN3-208ENST00000555837 POLR2KP53803 58 aaKnown RBP15.21■□□□□ 0.03
CDKN3-208ENST00000555837 REG3AQ06141 175 aa15.21■□□□□ 0.03
CDKN3-208ENST00000555837 MRPL51Q4U2R6 128 aaKnown RBP15.21■□□□□ 0.03
CDKN3-208ENST00000555837 TRBV24-1A0A075B6N3 115 aa15.2■□□□□ 0.02
CDKN3-208ENST00000555837 IGLV5-52A0A0A0MRZ9 124 aa15.2■□□□□ 0.02
CDKN3-208ENST00000555837 PHOX2AO14813 284 aa15.2■□□□□ 0.02
CDKN3-208ENST00000555837 TMEM18Q96B42 140 aa15.2■□□□□ 0.02
CDKN3-208ENST00000555837 RNASEKQ6P5S7 137 aaKnown RBP15.19■□□□□ 0.02
CDKN3-208ENST00000555837 GCSHP23434 173 aa15.18■□□□□ 0.02
CDKN3-208ENST00000555837 S100PP25815 95 aa15.18■□□□□ 0.02
CDKN3-208ENST00000555837 RPL32P62910 135 aaKnown RBP15.18■□□□□ 0.02
CDKN3-208ENST00000555837 ORMDL3Q8N138 153 aa15.18■□□□□ 0.02
CDKN3-208ENST00000555837 TRAV9-1A0A075B6T8 112 aa15.17■□□□□ 0.02
CDKN3-208ENST00000555837 C7orf77A4D0Y5 90 aa15.17■□□□□ 0.02
CDKN3-208ENST00000555837 RPS10P46783 165 aaKnown RBP15.17■□□□□ 0.02
CDKN3-208ENST00000555837 NRACQ8N912 160 aa15.17■□□□□ 0.02
CDKN3-208ENST00000555837 C20orf203Q8NBC4 194 aa15.17■□□□□ 0.02
CDKN3-208ENST00000555837 BAALCQ8WXS3 180 aa15.17■□□□□ 0.02
CDKN3-208ENST00000555837 LAMTOR2Q9Y2Q5 125 aa15.17■□□□□ 0.02
CDKN3-208ENST00000555837 PKHD1P08F94 4074 aa15.17■□□□□ 0.02
CDKN3-208ENST00000555837 TSHBP01222 138 aa15.16■□□□□ 0.02
CDKN3-208ENST00000555837 FGF6P10767 208 aa15.16■□□□□ 0.02
CDKN3-208ENST00000555837 TMEM242Q9NWH2 141 aa15.16■□□□□ 0.02
CDKN3-208ENST00000555837 SMKR1H3BMG3 65 aa15.15■□□□□ 0.02
CDKN3-208ENST00000555837 DGAT2L7PQ6IED9 249 aa15.15■□□□□ 0.02
CDKN3-208ENST00000555837 OR5A1Q8NGJ0 315 aa15.15■□□□□ 0.02
CDKN3-208ENST00000555837 DEFB104AQ8WTQ1 72 aa15.15■□□□□ 0.02
CDKN3-208ENST00000555837 IGLV4-60A0A075B6I1 120 aa15.14■□□□□ 0.01
CDKN3-208ENST00000555837 D6R8Y8 96 aa15.14■□□□□ 0.01
CDKN3-208ENST00000555837 TNFRSF6BO95407 300 aa15.14■□□□□ 0.01
CDKN3-208ENST00000555837 ESDP10768 282 aa15.14■□□□□ 0.01
CDKN3-208ENST00000555837 CLPSL2Q6UWE3 100 aa15.14■□□□□ 0.01
CDKN3-208ENST00000555837 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.13■□□□□ 0.01
CDKN3-208ENST00000555837 IGKV2-29A2NJV5 120 aaPredicted RBP15.13■□□□□ 0.01
CDKN3-208ENST00000555837 GAS8-AS1O95177 125 aa15.13■□□□□ 0.01
CDKN3-208ENST00000555837 HLA-DQA1P01909 254 aa15.13■□□□□ 0.01
CDKN3-208ENST00000555837 NDUFA5Q16718 116 aa15.13■□□□□ 0.01
CDKN3-208ENST00000555837 TMEM136Q6ZRR5 245 aa15.13■□□□□ 0.01
CDKN3-208ENST00000555837 ADCYAP1P18509 176 aa15.12■□□□□ 0.01
CDKN3-208ENST00000555837 RHEBQ15382 184 aa15.12■□□□□ 0.01
CDKN3-208ENST00000555837 MRPL52Q86TS9 123 aaKnown RBP15.12■□□□□ 0.01
CDKN3-208ENST00000555837 COX19Q49B96 90 aa15.11■□□□□ 0.01
CDKN3-208ENST00000555837 MAPKAPK5-AS1Q8N8E1 139 aa15.11■□□□□ 0.01
CDKN3-208ENST00000555837 CLRN3Q8NCR9 226 aa15.11■□□□□ 0.01
CDKN3-208ENST00000555837 LECT2O14960 151 aa15.1■□□□□ 0.01
CDKN3-208ENST00000555837 RAB5AP20339 215 aa15.1■□□□□ 0.01
CDKN3-208ENST00000555837 CFAP161Q6P656 301 aa15.1■□□□□ 0.01
CDKN3-208ENST00000555837 PRELID3AQ96N28 172 aa15.1■□□□□ 0.01
CDKN3-208ENST00000555837 SMIM2Q9BVW6 85 aa15.1■□□□□ 0.01
CDKN3-208ENST00000555837 CSDC2Q9Y534 153 aaKnown RBP15.1■□□□□ 0.01
CDKN3-208ENST00000555837 DNAH11Q96DT5 4516 aa15.09■□□□□ 0.01
CDKN3-208ENST00000555837 C10orf91Q5T1B1 145 aa15.09■□□□□ 0.01
CDKN3-208ENST00000555837 CARHSP1Q9Y2V2 147 aaKnown RBP15.09■□□□□ 0.01
CDKN3-208ENST00000555837 CCL25O15444 150 aa15.08■□□□□ 0
CDKN3-208ENST00000555837 IGLV10-54A0A075B6I4 117 aa15.07■□□□□ 0
CDKN3-208ENST00000555837 MAP1LC3AQ9H492 121 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms