RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 LINC00588Q9Y4M8 146 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 NACAE9PAV3 2078 aa6.66□□□□□ -1.34
ACTN1-215ENST00000555616 TRBV7-3A0A075B6L6 115 aa6.66□□□□□ -1.34
ACTN1-215ENST00000555616 TRBV6-5A0A0K0K1A5 114 aa6.66□□□□□ -1.34
ACTN1-215ENST00000555616 PMCHP20382 165 aa6.66□□□□□ -1.34
ACTN1-215ENST00000555616 CCL18P55774 89 aa6.66□□□□□ -1.34
ACTN1-215ENST00000555616 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
ACTN1-215ENST00000555616 VSIG2Q96IQ7 327 aa6.66□□□□□ -1.34
ACTN1-215ENST00000555616 A0A0J9YY99 117 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 A0A1B0GVY2 172 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 SDHAF1A6NFY7 115 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 NUPR1O60356 82 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 HSBP1O75506 76 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 GAS8-AS1O95177 125 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 SMIM6P0DI80 62 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 GYPEP15421 78 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 RPL32P62910 135 aaKnown RBP6.65□□□□□ -1.34
ACTN1-215ENST00000555616 RNASEKQ6P5S7 137 aaKnown RBP6.65□□□□□ -1.34
ACTN1-215ENST00000555616 SH2D6Q7Z4S9 175 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 NIT1Q86X76 327 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 UPK3BQ9BT76 320 aa6.65□□□□□ -1.34
ACTN1-215ENST00000555616 A0A096LPF7 62 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 NBDYA0A0U1RRE5 68 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 LOC389332A0A1B0GUA5 103 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 GAGE12JA6NER3 117 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 PRSS29PA6NIE9 313 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 PRSS47A8MTI9 375 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 VCYO14598 125 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 LINC00614P0C842 121 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 AMTP48728 403 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 GAGE1Q13065 139 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 GAGE4Q13068 117 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 GAGE5Q13069 117 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 MRPL23Q16540 153 aaKnown RBP6.64□□□□□ -1.35
ACTN1-215ENST00000555616 GAGE13Q4V321 117 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 FA2HQ7L5A8 372 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 DAZ4Q86SG3 579 aaKnown RBP6.64□□□□□ -1.35
ACTN1-215ENST00000555616 PRSS3P2Q8NHM4 247 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 KIR2DL4Q99706 377 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 TMEM70Q9BUB7 260 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 SMIM2Q9BVW6 85 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 NXT2Q9NPJ8 142 aaKnown RBP6.64□□□□□ -1.35
ACTN1-215ENST00000555616 DAZ3Q9NR90 486 aaKnown RBP6.64□□□□□ -1.35
ACTN1-215ENST00000555616 MRPS16Q9Y3D3 137 aaKnown RBP6.64□□□□□ -1.35
ACTN1-215ENST00000555616 ICOSQ9Y6W8 199 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
ACTN1-215ENST00000555616 TRBV27A0A0K0K1C4 114 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 I3L3M4 83 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 TCAPO15273 167 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 HERC2O95714 4834 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 UBE2D3P61077 147 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 UBE2D2P62837 147 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 C1orf134Q5TEV5 83 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 Q8N8P6 123 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 URB1-AS1Q96HZ7 61 aa6.63□□□□□ -1.35
ACTN1-215ENST00000555616 K7EMI3 77 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 FCER1GP30273 86 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 IFI27P40305 119 aaPredicted RBP6.62□□□□□ -1.35
ACTN1-215ENST00000555616 POLR2KP53803 58 aaKnown RBP6.62□□□□□ -1.35
ACTN1-215ENST00000555616 ESRGQ1W209 222 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 TMEM97Q5BJF2 176 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 LINC00518Q8N0U6 118 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 ATP6V0E2Q8NHE4 81 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 AP5S1Q9NUS5 200 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 Q9UF83 564 aa6.62□□□□□ -1.35
ACTN1-215ENST00000555616 PKHD1P08F94 4074 aa6.61□□□□□ -1.35
ACTN1-215ENST00000555616 LINC00694P0DN24 101 aa6.61□□□□□ -1.35
ACTN1-215ENST00000555616 COTL1Q14019 142 aa6.61□□□□□ -1.35
ACTN1-215ENST00000555616 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
ACTN1-215ENST00000555616 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
ACTN1-215ENST00000555616 Q9H8V8 135 aa6.61□□□□□ -1.35
ACTN1-215ENST00000555616 IGHV1-24A0A0C4DH33 117 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 IGHV3-38A0A0C4DH36 116 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 LINC01546A6NGU7 62 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 G0S2P27469 103 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 LAGE3Q14657 143 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 JOSD1Q15040 202 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-215ENST00000555616 ORMDL2Q53FV1 153 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 NEGR1Q7Z3B1 354 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 C6orf223Q8N319 242 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 FAM19A2Q8N3H0 131 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 C12orf57Q99622 126 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 KIAA1109Q2LD37 5005 aa6.6□□□□□ -1.35
ACTN1-215ENST00000555616 PKD1P98161 4303 aa6.59□□□□□ -1.35
ACTN1-215ENST00000555616 A6NJY4 79 aa6.59□□□□□ -1.35
ACTN1-215ENST00000555616 TSHBP01222 138 aa6.59□□□□□ -1.35
ACTN1-215ENST00000555616 PYY3Q5JQD4 70 aa6.59□□□□□ -1.35
ACTN1-215ENST00000555616 GTSF1LQ9H1H1 148 aa6.59□□□□□ -1.35
ACTN1-215ENST00000555616 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
ACTN1-215ENST00000555616 LEPROTL1O95214 131 aa6.58□□□□□ -1.36
ACTN1-215ENST00000555616 HBDP02042 147 aa6.58□□□□□ -1.36
ACTN1-215ENST00000555616 BTF3P20290 206 aaKnown RBP6.58□□□□□ -1.36
ACTN1-215ENST00000555616 TIRAPP58753 221 aa6.58□□□□□ -1.36
ACTN1-215ENST00000555616 HSPB8Q9UJY1 196 aa6.58□□□□□ -1.36
ACTN1-215ENST00000555616 TRBV25-1A0A075B6N4 114 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms