RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ISOC2Q96AB3 205 aa13.54□□□□□ -0.24
VTI1B-205ENST00000555543 COX11Q9Y6N1 276 aa13.54□□□□□ -0.24
VTI1B-205ENST00000555543 V9GYV3 84 aa13.54□□□□□ -0.24
VTI1B-205ENST00000555543 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
VTI1B-205ENST00000555543 PKIAP61925 76 aa13.53□□□□□ -0.24
VTI1B-205ENST00000555543 RPL23P62829 140 aaKnown RBP13.53□□□□□ -0.24
VTI1B-205ENST00000555543 RBX1P62877 108 aa13.53□□□□□ -0.24
VTI1B-205ENST00000555543 TMEM241Q24JQ0 296 aa13.53□□□□□ -0.24
VTI1B-205ENST00000555543 RPL39LQ96EH5 51 aaKnown RBP13.53□□□□□ -0.24
VTI1B-205ENST00000555543 XGP55808 180 aa13.52□□□□□ -0.25
VTI1B-205ENST00000555543 Q0VG73 95 aa13.52□□□□□ -0.25
VTI1B-205ENST00000555543 SMIM15Q7Z3B0 74 aa13.52□□□□□ -0.25
VTI1B-205ENST00000555543 GFRA4Q9GZZ7 299 aa13.52□□□□□ -0.25
VTI1B-205ENST00000555543 CRPP02741 224 aa13.51□□□□□ -0.25
VTI1B-205ENST00000555543 ADIRFQ15847 76 aa13.51□□□□□ -0.25
VTI1B-205ENST00000555543 Q8N1X5 172 aa13.51□□□□□ -0.25
VTI1B-205ENST00000555543 NAT8Q9UHE5 227 aa13.51□□□□□ -0.25
VTI1B-205ENST00000555543 A0A1B0GUT8 65 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 FAM231BA6NCW3 169 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 SNAPINO95295 136 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 CLPSL2Q6UWE3 100 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 CLRN3Q8NCR9 226 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 FRZBQ92765 325 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 TMEM243Q9BU79 118 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 C1orf43Q9BWL3 253 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 PRR34Q9NV39 138 aa13.5□□□□□ -0.25
VTI1B-205ENST00000555543 FAT1Q14517 4588 aa13.49□□□□□ -0.25
VTI1B-205ENST00000555543 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.49□□□□□ -0.25
VTI1B-205ENST00000555543 GAS8-AS1O95177 125 aa13.49□□□□□ -0.25
VTI1B-205ENST00000555543 PNRC1Q12796 327 aaPredicted RBP13.49□□□□□ -0.25
VTI1B-205ENST00000555543 BORCS7Q96B45 105 aa13.49□□□□□ -0.25
VTI1B-205ENST00000555543 COTL1Q14019 142 aa13.48□□□□□ -0.25
VTI1B-205ENST00000555543 LINC00269Q8N2A0 174 aa13.48□□□□□ -0.25
VTI1B-205ENST00000555543 AMTP48728 403 aa13.47□□□□□ -0.25
VTI1B-205ENST00000555543 C20orf203Q8NBC4 194 aa13.47□□□□□ -0.25
VTI1B-205ENST00000555543 NUP35Q8NFH5 326 aa13.47□□□□□ -0.25
VTI1B-205ENST00000555543 IGLV4-60A0A075B6I1 120 aa13.46□□□□□ -0.25
VTI1B-205ENST00000555543 HAMPP81172 84 aa13.46□□□□□ -0.25
VTI1B-205ENST00000555543 MIAQ16674 131 aa13.46□□□□□ -0.25
VTI1B-205ENST00000555543 RNF185Q96GF1 192 aa13.46□□□□□ -0.25
VTI1B-205ENST00000555543 TMEM191AQ9H0A3 160 aa13.46□□□□□ -0.25
VTI1B-205ENST00000555543 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
VTI1B-205ENST00000555543 A0A1B0GUV1 79 aa13.44□□□□□ -0.26
VTI1B-205ENST00000555543 SDHAF1A6NFY7 115 aa13.44□□□□□ -0.26
VTI1B-205ENST00000555543 RHEBQ15382 184 aa13.44□□□□□ -0.26
VTI1B-205ENST00000555543 AMN1Q8IY45 258 aa13.44□□□□□ -0.26
VTI1B-205ENST00000555543 FAM30AQ9NZY2 134 aa13.44□□□□□ -0.26
VTI1B-205ENST00000555543 C7orf77A4D0Y5 90 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 HLA-DQA1P01909 254 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 RAB4AP20338 218 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 REG3AQ06141 175 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 LINC01620Q4KN68 170 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 TMEM70Q9BUB7 260 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 NAT8BQ9UHF3 227 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 VPS13BQ7Z7G8 4022 aa13.43□□□□□ -0.26
VTI1B-205ENST00000555543 TRBV6-5A0A0K0K1A5 114 aa13.42□□□□□ -0.26
VTI1B-205ENST00000555543 SMIM27A0A1W2PRY6 76 aa13.42□□□□□ -0.26
VTI1B-205ENST00000555543 UBE2L6O14933 153 aa13.42□□□□□ -0.26
VTI1B-205ENST00000555543 RPS10P46783 165 aaKnown RBP13.42□□□□□ -0.26
VTI1B-205ENST00000555543 RIGQ13278 110 aa13.42□□□□□ -0.26
VTI1B-205ENST00000555543 IGLV10-54A0A075B6I4 117 aa13.41□□□□□ -0.26
VTI1B-205ENST00000555543 USP17L23D6RBM5 183 aa13.4□□□□□ -0.26
VTI1B-205ENST00000555543 SCO1O75880 301 aa13.4□□□□□ -0.26
VTI1B-205ENST00000555543 NCR2O95944 276 aa13.4□□□□□ -0.26
VTI1B-205ENST00000555543 RPS10P5Q9NQ39 176 aa13.4□□□□□ -0.26
VTI1B-205ENST00000555543 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.39□□□□□ -0.27
VTI1B-205ENST00000555543 IGKV2-29A2NJV5 120 aaPredicted RBP13.39□□□□□ -0.27
VTI1B-205ENST00000555543 SMKR1H3BMG3 65 aa13.39□□□□□ -0.27
VTI1B-205ENST00000555543 APCSP02743 223 aa13.39□□□□□ -0.27
VTI1B-205ENST00000555543 MRAP2Q96G30 205 aa13.39□□□□□ -0.27
VTI1B-205ENST00000555543 I3L3M4 83 aa13.38□□□□□ -0.27
VTI1B-205ENST00000555543 MT-ND4LP03901 98 aa13.38□□□□□ -0.27
VTI1B-205ENST00000555543 Q6ZSA8 131 aa13.38□□□□□ -0.27
VTI1B-205ENST00000555543 ST20Q9HBF5 79 aa13.38□□□□□ -0.27
VTI1B-205ENST00000555543 TSHBP01222 138 aa13.37□□□□□ -0.27
VTI1B-205ENST00000555543 SMR3BP02814 79 aaPredicted RBP13.37□□□□□ -0.27
VTI1B-205ENST00000555543 PMCHP20382 165 aa13.37□□□□□ -0.27
VTI1B-205ENST00000555543 CTDSP1Q9GZU7 261 aa13.37□□□□□ -0.27
VTI1B-205ENST00000555543 TMEM242Q9NWH2 141 aa13.37□□□□□ -0.27
VTI1B-205ENST00000555543 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
VTI1B-205ENST00000555543 C14orf177Q52M58 125 aa13.36□□□□□ -0.27
VTI1B-205ENST00000555543 ANAPC16Q96DE5 110 aa13.36□□□□□ -0.27
VTI1B-205ENST00000555543 TRAV8-4A0A0B4J246 113 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 PPP1R2P9O14990 202 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 PRSS1P07477 247 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 FGF6P10767 208 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 CAMPP49913 170 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 FAM104BQ5XKR9 115 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 NRACQ8N912 160 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 SMCO4Q9NRQ5 59 aa13.35□□□□□ -0.27
VTI1B-205ENST00000555543 TRBV27A0A0K0K1C4 114 aa13.34□□□□□ -0.27
VTI1B-205ENST00000555543 ESDP10768 282 aa13.34□□□□□ -0.27
VTI1B-205ENST00000555543 MRPL51Q4U2R6 128 aaKnown RBP13.34□□□□□ -0.27
VTI1B-205ENST00000555543 Q5VSD8 79 aa13.34□□□□□ -0.27
VTI1B-205ENST00000555543 AMMECR1LQ6DCA0 310 aa13.34□□□□□ -0.27
VTI1B-205ENST00000555543 MRPL54Q6P161 138 aaKnown RBP13.34□□□□□ -0.27
VTI1B-205ENST00000555543 RNASEKQ6P5S7 137 aaKnown RBP13.34□□□□□ -0.27
VTI1B-205ENST00000555543 H7C423 109 aa13.33□□□□□ -0.28
VTI1B-205ENST00000555543 IGKV3OR2-268A0A0C4DH90 116 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms