RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
VRK1-204ENST00000555351 REG3AQ06141 175 aa7.73□□□□□ -1.17
VRK1-204ENST00000555351 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
VRK1-204ENST00000555351 GATD1Q8NB37 220 aa7.73□□□□□ -1.17
VRK1-204ENST00000555351 USP17L23D6RBM5 183 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 H7C423 109 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 AMTP48728 403 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 LINC01551Q86U37 167 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 C20orf203Q8NBC4 194 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 OSTCQ9NRP0 149 aa7.72□□□□□ -1.17
VRK1-204ENST00000555351 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
VRK1-204ENST00000555351 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
VRK1-204ENST00000555351 UBE2L6O14933 153 aa7.71□□□□□ -1.18
VRK1-204ENST00000555351 HLA-DQA1P01909 254 aa7.71□□□□□ -1.18
VRK1-204ENST00000555351 SRP19P09132 144 aaKnown RBP7.71□□□□□ -1.18
VRK1-204ENST00000555351 FAM74A3Q4VXF1 159 aa7.71□□□□□ -1.18
VRK1-204ENST00000555351 TSKUQ8WUA8 353 aa7.71□□□□□ -1.18
VRK1-204ENST00000555351 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.18
VRK1-204ENST00000555351 A0A1B0GUT8 65 aa7.7□□□□□ -1.18
VRK1-204ENST00000555351 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
VRK1-204ENST00000555351 CEBPGP53567 150 aa7.7□□□□□ -1.18
VRK1-204ENST00000555351 TMEM191AQ9H0A3 160 aa7.7□□□□□ -1.18
VRK1-204ENST00000555351 SMDT1Q9H4I9 107 aa7.7□□□□□ -1.18
VRK1-204ENST00000555351 FAT1Q14517 4588 aa7.7□□□□□ -1.18
VRK1-204ENST00000555351 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
VRK1-204ENST00000555351 IGLV4-60A0A075B6I1 120 aa7.69□□□□□ -1.18
VRK1-204ENST00000555351 PRSS1P07477 247 aa7.69□□□□□ -1.18
VRK1-204ENST00000555351 HAMPP81172 84 aa7.69□□□□□ -1.18
VRK1-204ENST00000555351 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
VRK1-204ENST00000555351 C9orf163Q8N9P6 203 aa7.69□□□□□ -1.18
VRK1-204ENST00000555351 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
VRK1-204ENST00000555351 TRAV26-2A0A0B4J265 109 aa7.68□□□□□ -1.18
VRK1-204ENST00000555351 SDHAF1A6NFY7 115 aa7.68□□□□□ -1.18
VRK1-204ENST00000555351 HIGD1CA8MV81 97 aa7.68□□□□□ -1.18
VRK1-204ENST00000555351 TMEM241Q24JQ0 296 aa7.68□□□□□ -1.18
VRK1-204ENST00000555351 LINC01620Q4KN68 170 aa7.68□□□□□ -1.18
VRK1-204ENST00000555351 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
VRK1-204ENST00000555351 A0A1B0GVG6 124 aa7.67□□□□□ -1.18
VRK1-204ENST00000555351 I3L3M4 83 aa7.67□□□□□ -1.18
VRK1-204ENST00000555351 APCSP02743 223 aa7.67□□□□□ -1.18
VRK1-204ENST00000555351 ZNF25P17030 456 aaPredicted RBP7.67□□□□□ -1.18
VRK1-204ENST00000555351 CNBPP62633 177 aaKnown RBP7.67□□□□□ -1.18
VRK1-204ENST00000555351 LINC00528Q8N1L1 170 aa7.67□□□□□ -1.18
VRK1-204ENST00000555351 RPL39LQ96EH5 51 aaKnown RBP7.67□□□□□ -1.18
VRK1-204ENST00000555351 MRAP2Q96G30 205 aa7.67□□□□□ -1.18
VRK1-204ENST00000555351 V9GYV3 84 aa7.67□□□□□ -1.18
VRK1-204ENST00000555351 PPP1R17O96001 155 aa7.66□□□□□ -1.18
VRK1-204ENST00000555351 RIGQ13278 110 aa7.66□□□□□ -1.18
VRK1-204ENST00000555351 CIRBP-AS1Q8TBR5 109 aa7.66□□□□□ -1.18
VRK1-204ENST00000555351 ISOC2Q96AB3 205 aa7.66□□□□□ -1.18
VRK1-204ENST00000555351 VPS13BQ7Z7G8 4022 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 IGLV10-54A0A075B6I4 117 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 PMCHP20382 165 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 PEA15Q15121 130 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 AMMECR1LQ6DCA0 310 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 CFAP161Q6P656 301 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 NAT8Q9UHE5 227 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 NAT8BQ9UHF3 227 aa7.65□□□□□ -1.18
VRK1-204ENST00000555351 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.64□□□□□ -1.19
VRK1-204ENST00000555351 TRBV27A0A0K0K1C4 114 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 A0A1B0GW15 77 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 FGF6P10767 208 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 ESDP10768 282 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 RAB4AP20338 218 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 POLR2KP53803 58 aaKnown RBP7.64□□□□□ -1.19
VRK1-204ENST00000555351 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
VRK1-204ENST00000555351 NUP35Q8NFH5 326 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 DEFB104AQ8WTQ1 72 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 RNF185Q96GF1 192 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 AP5S1Q9NUS5 200 aa7.64□□□□□ -1.19
VRK1-204ENST00000555351 hDV102S1A0JD36 115 aa7.63□□□□□ -1.19
VRK1-204ENST00000555351 TSHBP01222 138 aa7.63□□□□□ -1.19
VRK1-204ENST00000555351 SDIM1Q6ZPB5 146 aa7.63□□□□□ -1.19
VRK1-204ENST00000555351 MRPL52Q86TS9 123 aaKnown RBP7.63□□□□□ -1.19
VRK1-204ENST00000555351 OR5A1Q8NGJ0 315 aa7.63□□□□□ -1.19
VRK1-204ENST00000555351 BTF3L4Q96K17 158 aa7.63□□□□□ -1.19
VRK1-204ENST00000555351 SMIM27A0A1W2PRY6 76 aa7.62□□□□□ -1.19
VRK1-204ENST00000555351 VCYO14598 125 aa7.62□□□□□ -1.19
VRK1-204ENST00000555351 SMAGPQ0VAQ4 97 aa7.62□□□□□ -1.19
VRK1-204ENST00000555351 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
VRK1-204ENST00000555351 RNASEKQ6P5S7 137 aaKnown RBP7.62□□□□□ -1.19
VRK1-204ENST00000555351 TMEM101Q96IK0 257 aa7.62□□□□□ -1.19
VRK1-204ENST00000555351 DMBT1Q9UGM3 2413 aaPredicted RBP7.61□□□□□ -1.19
VRK1-204ENST00000555351 IGHV3-64A0A075B6Q5 118 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
VRK1-204ENST00000555351 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
VRK1-204ENST00000555351 LINC00862A6NCI5 91 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 GAGE12HA6NDE8 117 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 A6NJY4 79 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 C9JQL5 133 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 PPP1R2P9O14990 202 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 ADIRFQ15847 76 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 AMN1Q8IY45 258 aa7.61□□□□□ -1.19
VRK1-204ENST00000555351 CHCHD10Q8WYQ3 142 aaPredicted RBP7.61□□□□□ -1.19
VRK1-204ENST00000555351 CSDC2Q9Y534 153 aaKnown RBP7.61□□□□□ -1.19
VRK1-204ENST00000555351 C7orf77A4D0Y5 90 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms