RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
SRP54-206ENST00000555317 I3L3M4 83 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 NCR2O95944 276 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 MT-ND4LP03901 98 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 RAB4AP20338 218 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 PMCHP20382 165 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 HBBP68871 147 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 UQCC3Q6UW78 93 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 DEFB104AQ8WTQ1 72 aa8.07□□□□□ -1.12
SRP54-206ENST00000555317 IGLV5-52A0A0A0MRZ9 124 aa8.06□□□□□ -1.12
SRP54-206ENST00000555317 F8W036 122 aa8.06□□□□□ -1.12
SRP54-206ENST00000555317 IFITM2Q01629 132 aa8.06□□□□□ -1.12
SRP54-206ENST00000555317 MIAQ16674 131 aa8.06□□□□□ -1.12
SRP54-206ENST00000555317 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
SRP54-206ENST00000555317 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
SRP54-206ENST00000555317 CLPSL2Q6UWE3 100 aa8.06□□□□□ -1.12
SRP54-206ENST00000555317 Q8N814 137 aa8.06□□□□□ -1.12
SRP54-206ENST00000555317 NTN5Q8WTR8 489 aaPredicted RBP8.06□□□□□ -1.12
SRP54-206ENST00000555317 KIAA1109Q2LD37 5005 aa8.05□□□□□ -1.12
SRP54-206ENST00000555317 TRBV6-5A0A0K0K1A5 114 aa8.05□□□□□ -1.12
SRP54-206ENST00000555317 LRCOL1A6NCL2 159 aa8.05□□□□□ -1.12
SRP54-206ENST00000555317 LECT2O14960 151 aa8.05□□□□□ -1.12
SRP54-206ENST00000555317 LINC00269Q8N2A0 174 aa8.05□□□□□ -1.12
SRP54-206ENST00000555317 ANAPC16Q96DE5 110 aa8.05□□□□□ -1.12
SRP54-206ENST00000555317 RNF185Q96GF1 192 aa8.05□□□□□ -1.12
SRP54-206ENST00000555317 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
SRP54-206ENST00000555317 A0A1B0GUV1 79 aa8.04□□□□□ -1.12
SRP54-206ENST00000555317 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
SRP54-206ENST00000555317 FUSP35637 526 aaKnown RBP eCLIP8.04□□□□□ -1.12
SRP54-206ENST00000555317 FAM104BQ5XKR9 115 aa8.04□□□□□ -1.12
SRP54-206ENST00000555317 RNASEKQ6P5S7 137 aaKnown RBP8.04□□□□□ -1.12
SRP54-206ENST00000555317 ENHOQ6UWT2 76 aa8.04□□□□□ -1.12
SRP54-206ENST00000555317 ATP5L2Q7Z4Y8 100 aa8.04□□□□□ -1.12
SRP54-206ENST00000555317 BAALCQ8WXS3 180 aa8.04□□□□□ -1.12
SRP54-206ENST00000555317 CDK2AP2O75956 126 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 FCER1GP30273 86 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 CKS2P33552 79 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 RPS10P46783 165 aaKnown RBP8.03□□□□□ -1.12
SRP54-206ENST00000555317 REG3AQ06141 175 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
SRP54-206ENST00000555317 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 COMMD7Q86VX2 200 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 TMEM70Q9BUB7 260 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 TMEM242Q9NWH2 141 aa8.03□□□□□ -1.12
SRP54-206ENST00000555317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.02□□□□□ -1.13
SRP54-206ENST00000555317 IGKV2-29A2NJV5 120 aaPredicted RBP8.02□□□□□ -1.13
SRP54-206ENST00000555317 TMEM218A2RU14 115 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 LINC00862A6NCI5 91 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 H7C423 109 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 VCYO14598 125 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 GAS8-AS1O95177 125 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 GCSHP23434 173 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
SRP54-206ENST00000555317 TMEM101Q96IK0 257 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 BTF3L4Q96K17 158 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 KIR2DL4Q99706 377 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 PRR34Q9NV39 138 aa8.02□□□□□ -1.13
SRP54-206ENST00000555317 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
SRP54-206ENST00000555317 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
SRP54-206ENST00000555317 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
SRP54-206ENST00000555317 TRBV27A0A0K0K1C4 114 aa8.01□□□□□ -1.13
SRP54-206ENST00000555317 A0A1B0GXF2 115 aa8.01□□□□□ -1.13
SRP54-206ENST00000555317 SMAGPQ0VAQ4 97 aa8.01□□□□□ -1.13
SRP54-206ENST00000555317 C20orf203Q8NBC4 194 aa8.01□□□□□ -1.13
SRP54-206ENST00000555317 HERC2O95714 4834 aa8.01□□□□□ -1.13
SRP54-206ENST00000555317 LRP1BQ9NZR2 4599 aa8□□□□□ -1.13
SRP54-206ENST00000555317 IGLV10-54A0A075B6I4 117 aa8□□□□□ -1.13
SRP54-206ENST00000555317 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
SRP54-206ENST00000555317 C7orf77A4D0Y5 90 aa8□□□□□ -1.13
SRP54-206ENST00000555317 D6R8Y8 96 aa8□□□□□ -1.13
SRP54-206ENST00000555317 TSHBP01222 138 aa8□□□□□ -1.13
SRP54-206ENST00000555317 PPBPP02775 128 aa8□□□□□ -1.13
SRP54-206ENST00000555317 FGF6P10767 208 aa8□□□□□ -1.13
SRP54-206ENST00000555317 ZNF25P17030 456 aaPredicted RBP8□□□□□ -1.13
SRP54-206ENST00000555317 POLR2KP53803 58 aaKnown RBP8□□□□□ -1.13
SRP54-206ENST00000555317 WFDC2Q14508 124 aa8□□□□□ -1.13
SRP54-206ENST00000555317 MAPKAPK5-AS1Q8N8E1 139 aa8□□□□□ -1.13
SRP54-206ENST00000555317 NRACQ8N912 160 aa8□□□□□ -1.13
SRP54-206ENST00000555317 DNAH5Q8TE73 4624 aa8□□□□□ -1.13
SRP54-206ENST00000555317 TCAPO15273 167 aa7.99□□□□□ -1.13
SRP54-206ENST00000555317 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
SRP54-206ENST00000555317 C20orf78Q9BR46 151 aa7.99□□□□□ -1.13
SRP54-206ENST00000555317 SEC11CQ9BY50 192 aa7.99□□□□□ -1.13
SRP54-206ENST00000555317 RYR1P21817 5038 aa7.99□□□□□ -1.13
SRP54-206ENST00000555317 TNFRSF6BO95407 300 aa7.98□□□□□ -1.13
SRP54-206ENST00000555317 ADCYAP1P18509 176 aa7.98□□□□□ -1.13
SRP54-206ENST00000555317 DGAT2L7PQ6IED9 249 aa7.98□□□□□ -1.13
SRP54-206ENST00000555317 ORMDL3Q8N138 153 aa7.98□□□□□ -1.13
SRP54-206ENST00000555317 TMEM18Q96B42 140 aa7.98□□□□□ -1.13
SRP54-206ENST00000555317 CTDSP1Q9GZU7 261 aa7.98□□□□□ -1.13
SRP54-206ENST00000555317 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
SRP54-206ENST00000555317 USP17L23D6RBM5 183 aa7.97□□□□□ -1.13
SRP54-206ENST00000555317 PHOX2AO14813 284 aa7.97□□□□□ -1.13
SRP54-206ENST00000555317 S100PP25815 95 aa7.97□□□□□ -1.13
SRP54-206ENST00000555317 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
SRP54-206ENST00000555317 IMMP2LQ96T52 175 aa7.97□□□□□ -1.13
SRP54-206ENST00000555317 ESDP10768 282 aa7.96□□□□□ -1.14
SRP54-206ENST00000555317 RPL32P62910 135 aaKnown RBP7.96□□□□□ -1.14
SRP54-206ENST00000555317 TMEM136Q6ZRR5 245 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms