RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 BIN3Q9NQY0 253 aa4.2□□□□□ -1.74
PRKCH-214ENST00000555233 PHLDA3Q9Y5J5 127 aa4.2□□□□□ -1.74
PRKCH-214ENST00000555233 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 A0A087WWC5 75 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 C7orf77A4D0Y5 90 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 S100A4P26447 101 aaKnown RBP4.19□□□□□ -1.74
PRKCH-214ENST00000555233 TCTAP57738 103 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 UBE2D3P61077 147 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 UBE2D2P62837 147 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 RPL24P83731 157 aaKnown RBP4.19□□□□□ -1.74
PRKCH-214ENST00000555233 LINC00518Q8N0U6 118 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 OR4C5Q8NGB2 326 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 HHLA3Q9XRX5 114 aa4.19□□□□□ -1.74
PRKCH-214ENST00000555233 BIRC6Q9NR09 4857 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 IGLV5-37A0A075B6J1 123 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 A0A087WZ39 114 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 IGLV5-52A0A0A0MRZ9 124 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 TRAV26-2A0A0B4J265 109 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 A0A1B0GUT8 65 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 F8W036 122 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 PHOX2AO14813 284 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 CIDEAO60543 219 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 RAB4AP20338 218 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 CACNG7P62955 275 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 LYPD5Q6UWN5 251 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 Q6ZRN7 208 aaPredicted RBP4.18□□□□□ -1.74
PRKCH-214ENST00000555233 AMN1Q8IY45 258 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 C15orf53Q8NAA6 179 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 AP1S3Q96PC3 154 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 TMEM191AQ9H0A3 160 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 TMEM242Q9NWH2 141 aa4.18□□□□□ -1.74
PRKCH-214ENST00000555233 MRPS16Q9Y3D3 137 aaKnown RBP4.18□□□□□ -1.74
PRKCH-214ENST00000555233 IGLV2-18A0A075B6J9 118 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 TRBV10-1A0A0K0K1A3 114 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 TRBV6-5A0A0K0K1A5 114 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 CDK2AP2O75956 126 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 POLR2KP53803 58 aaKnown RBP4.17□□□□□ -1.74
PRKCH-214ENST00000555233 RAB4BP61018 213 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 RHOHQ15669 191 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 MRPL51Q4U2R6 128 aaKnown RBP4.17□□□□□ -1.74
PRKCH-214ENST00000555233 FAM74A4Q5TZK3 123 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 FAM104BQ5XKR9 115 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 RNASEKQ6P5S7 137 aaKnown RBP4.17□□□□□ -1.74
PRKCH-214ENST00000555233 TMEM136Q6ZRR5 245 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 WFDC10BQ8IUB3 73 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 PRR26Q8N8Z3 221 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 RPL39LQ96EH5 51 aaKnown RBP4.17□□□□□ -1.74
PRKCH-214ENST00000555233 DPH3P1Q9H4G8 78 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 NAT8BQ9UHF3 227 aa4.17□□□□□ -1.74
PRKCH-214ENST00000555233 KLK5Q9Y337 293 aaPredicted RBP4.17□□□□□ -1.74
PRKCH-214ENST00000555233 TRGV4A0A0C4DH28 118 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 SMKR1H3BMG3 65 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 PRSS2P07478 247 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 GAGE5Q13069 117 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 GAGE6Q13070 117 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 SLAQ13239 276 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 ELOBQ15370 118 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 RHEBQ15382 184 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 SPANXN1Q5VSR9 72 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 MRPL54Q6P161 138 aaKnown RBP4.16□□□□□ -1.74
PRKCH-214ENST00000555233 C15orf54Q8N8G6 183 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 IMMP2LQ96T52 175 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 ICOSQ9Y6W8 199 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
PRKCH-214ENST00000555233 TRBV7-3A0A075B6L6 115 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 TRBV24-1A0A075B6N3 115 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 IGLV5-45A0A087WSX0 123 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 PPP1R2P9O14990 202 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 RTL8CO15255 209 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 NCR2O95944 276 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 MT-ND4LP03901 98 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 DNAH10OSP0CZ25 163 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 TWIST1Q15672 202 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 MRPL23Q16540 153 aaKnown RBP4.15□□□□□ -1.75
PRKCH-214ENST00000555233 KRTAP26-1Q6PEX3 210 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 Q6ZVQ6 151 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 ATP5L2Q7Z4Y8 100 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 DNAJC30Q96LL9 226 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.75
PRKCH-214ENST00000555233 TRAV9-1A0A075B6T8 112 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 TGIF2-C20orf24A0A0A6YYL0 155 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 A0A1B0GVY2 172 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 NUDT3O95989 172 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 TSHBP01222 138 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 NPYP01303 97 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 APOC3P02656 99 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 TRGC1P0CF51 173 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 ESDP10768 282 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 RPL32P62910 135 aaKnown RBP4.14□□□□□ -1.75
PRKCH-214ENST00000555233 HBBP68871 147 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 SRSF9Q13242 221 aaKnown RBP eCLIP4.14□□□□□ -1.75
PRKCH-214ENST00000555233 ZNF56Q15929 161 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 C6orf226Q5I0X4 101 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 RASL11AQ6T310 242 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 NEGR1Q7Z3B1 354 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 FRZBQ92765 325 aa4.14□□□□□ -1.75
PRKCH-214ENST00000555233 TMEM70Q9BUB7 260 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms