RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HSPE1P61604 102 aaKnown RBP2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 BLCAPP62952 87 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 RUNX1Q01196 453 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 SLC38A11Q08AI6 406 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 SCGB2B2Q4G0G5 96 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 UNQ5815/PRO19632Q6UWF5 114 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 KTN1-AS1Q86SY8 53 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 C10orf126Q8N4M7 172 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 Q8N6K4 173 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 C5orf56Q8N8D9 126 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 WFDC9Q8NEX5 89 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 OR5H6Q8NGV6 325 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 TMEM167AQ8TBQ9 72 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 C4orf3Q8WVX3 66 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 LEAP2Q969E1 77 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 OR4C12Q96R67 309 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 CCDC32Q9BV29 185 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 DOK5Q9P104 306 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 U3KQ87 197 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 SVEP1Q4LDE5 3571 aa2.02□□□□□ -2.09
CKS1BP1-201ENST00000555221 C3orf85A0A1B0GTC6 90 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 H3BT86 120 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 I3L521 148 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 TFF1P04155 84 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 CD3DP04234 171 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 SRP19P09132 144 aaKnown RBP2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 OR5G3P0C626 314 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 RPL28P46779 137 aaKnown RBP2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 SPCS3P61009 180 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 ZNF846Q147U1 533 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 RPL39P5Q59GN2 51 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 SAMD13Q5VXD3 122 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 IDO2Q6ZQW0 420 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 DYNAPQ8N1N2 210 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 TTC9CQ8N5M4 171 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 SPACA4Q8TDM5 124 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 LSM10Q969L4 123 aaKnown RBP2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 GINS3Q9BRX5 216 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 COA4Q9NYJ1 87 aa2.01□□□□□ -2.09
CKS1BP1-201ENST00000555221 J3QRK9 145 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 LEPROTO15243 131 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 GGCTO75223 188 aaKnown RBP2□□□□□ -2.09
CKS1BP1-201ENST00000555221 SULT1A3P0DMM9 295 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 SULT1A4P0DMN0 295 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 HIST1H1EP10412 219 aaKnown RBP2□□□□□ -2.09
CKS1BP1-201ENST00000555221 SLC25A4P12235 298 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 TPPP2P59282 170 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 SPCS2Q15005 226 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 ZNF818PQ6ZRF7 136 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 RPP25LQ8N5L8 163 aaKnown RBP2□□□□□ -2.09
CKS1BP1-201ENST00000555221 GRPEL2Q8TAA5 225 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 MAFIPQ8WZ33 124 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 ZNF625Q96I27 306 aaPredicted RBP2□□□□□ -2.09
CKS1BP1-201ENST00000555221 NAA60Q9H7X0 242 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 TMEM14BQ9NUH8 114 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 NAT8Q9UHE5 227 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 UFC1Q9Y3C8 167 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 TMEM56-RWDD3S4R434 201 aa2□□□□□ -2.09
CKS1BP1-201ENST00000555221 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 MEIS3P1A6NDR6 274 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 CRYM-AS1A6NIL9 109 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 HMSDA8MTL9 139 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 CEBPZOSA8MTT3 80 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 SNRPGP15A8MWD9 76 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 NDUFA4O00483 81 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 LYRM1O43325 122 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 GNG7O60262 68 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 NDUFB6O95139 128 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 IFNA10P01566 189 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 IFNA4P05014 189 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 ZNF705DP0CH99 300 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 SAA1P0DJI8 122 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 RHOGP84095 191 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 PRCDQ00LT1 54 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 PRB3Q04118 309 aaPredicted RBP1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 PMAIP1Q13794 54 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 DIAPH2-AS1Q14236 149 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 SMCO1Q147U7 214 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 KLK9Q2XQG4 91 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 C1orf158Q8N1D5 194 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 GGACTQ9BVM4 153 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 MIXL1Q9H2W2 232 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 NDUFA4L2Q9NRX3 87 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 MRPL27Q9P0M9 148 aaKnown RBP1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 KLK9Q9UKQ9 250 aa1.99□□□□□ -2.09
CKS1BP1-201ENST00000555221 TRAV14DV4A0A0A6YYC5 116 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 INMT-MINDY4F8WBC2 141 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 G3V318 75 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 SFT2D2O95562 160 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 TCRBP04435 133 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 IL5P05113 134 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 OR4E1P0C645 316 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 FGF6P10767 208 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 G6PCP35575 357 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 YPEL3P61236 119 aaPredicted RBP1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 OR2F1Q13607 317 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 Q56UQ5 140 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 NMSQ5H8A3 153 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 DEFB121Q5J5C9 76 aa1.98□□□□□ -2.09
CKS1BP1-201ENST00000555221 Q6ZRN7 208 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms