RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 RNF185Q96GF1 192 aa9.97□□□□□ -0.81
ARHGEF40-205ENST00000555052 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
ARHGEF40-205ENST00000555052 CTRLP40313 264 aa9.96□□□□□ -0.82
ARHGEF40-205ENST00000555052 RAB5CP51148 216 aa9.96□□□□□ -0.82
ARHGEF40-205ENST00000555052 MEF2BQ02080 365 aaPredicted RBP9.96□□□□□ -0.82
ARHGEF40-205ENST00000555052 Q6ZRU5 148 aa9.96□□□□□ -0.82
ARHGEF40-205ENST00000555052 C9orf62Q8N4C0 152 aa9.96□□□□□ -0.82
ARHGEF40-205ENST00000555052 SPACA4Q8TDM5 124 aa9.96□□□□□ -0.82
ARHGEF40-205ENST00000555052 CNFNQ9BYD5 112 aa9.96□□□□□ -0.82
ARHGEF40-205ENST00000555052 A0A087WYN8 130 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 PDE6DO43924 150 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 IFNA1P01562 189 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 NTF3P20783 257 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 WDR73Q6P4I2 378 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 AP5S1Q9NUS5 200 aa9.95□□□□□ -0.82
ARHGEF40-205ENST00000555052 AMTP48728 403 aa9.94□□□□□ -0.82
ARHGEF40-205ENST00000555052 COTL1Q14019 142 aa9.94□□□□□ -0.82
ARHGEF40-205ENST00000555052 UBE2L6O14933 153 aa9.93□□□□□ -0.82
ARHGEF40-205ENST00000555052 SULT1A2P50226 295 aa9.93□□□□□ -0.82
ARHGEF40-205ENST00000555052 BIN3Q9NQY0 253 aa9.93□□□□□ -0.82
ARHGEF40-205ENST00000555052 MED9Q9NWA0 146 aa9.93□□□□□ -0.82
ARHGEF40-205ENST00000555052 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
ARHGEF40-205ENST00000555052 RNF213Q63HN8 5207 aa9.92□□□□□ -0.82
ARHGEF40-205ENST00000555052 TEX46H3BTG2 121 aa9.92□□□□□ -0.82
ARHGEF40-205ENST00000555052 BCL2P10415 239 aa9.92□□□□□ -0.82
ARHGEF40-205ENST00000555052 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
ARHGEF40-205ENST00000555052 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
ARHGEF40-205ENST00000555052 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
ARHGEF40-205ENST00000555052 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
ARHGEF40-205ENST00000555052 EIF5AL1Q6IS14 154 aaKnown RBP9.91□□□□□ -0.82
ARHGEF40-205ENST00000555052 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
ARHGEF40-205ENST00000555052 TWIST1Q15672 202 aa9.9□□□□□ -0.82
ARHGEF40-205ENST00000555052 K7EN84 100 aa9.89□□□□□ -0.83
ARHGEF40-205ENST00000555052 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
ARHGEF40-205ENST00000555052 Q6ZNX1 250 aa9.89□□□□□ -0.83
ARHGEF40-205ENST00000555052 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
ARHGEF40-205ENST00000555052 RPP21Q9H633 154 aaKnown RBP9.89□□□□□ -0.83
ARHGEF40-205ENST00000555052 IGKV3OR2-268A0A0C4DH90 116 aa9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 PHOX2AO14813 284 aa9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 NCR2O95944 276 aa9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 RPS10P46783 165 aaKnown RBP9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 COX6A2Q02221 97 aa9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 RPL39LQ96EH5 51 aaKnown RBP9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 RNASE7Q9H1E1 156 aaKnown RBP9.88□□□□□ -0.83
ARHGEF40-205ENST00000555052 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
ARHGEF40-205ENST00000555052 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
ARHGEF40-205ENST00000555052 GTSF1Q8WW33 167 aa9.87□□□□□ -0.83
ARHGEF40-205ENST00000555052 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 IGKV2-29A2NJV5 120 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 H7C423 109 aa9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 NDUFS6O75380 124 aaKnown RBP9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 TAGLN2P37802 199 aaKnown RBP9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 FOXA3P55318 350 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 AMMECR1LQ6DCA0 310 aa9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 OCC1Q8TAD7 63 aa9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
ARHGEF40-205ENST00000555052 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
ARHGEF40-205ENST00000555052 APCSP02743 223 aa9.85□□□□□ -0.83
ARHGEF40-205ENST00000555052 FGF6P10767 208 aa9.85□□□□□ -0.83
ARHGEF40-205ENST00000555052 FOXI1Q12951 378 aa9.84□□□□□ -0.83
ARHGEF40-205ENST00000555052 MAJINQ3KP22 176 aa9.84□□□□□ -0.83
ARHGEF40-205ENST00000555052 RNASEKQ6P5S7 137 aaKnown RBP9.84□□□□□ -0.83
ARHGEF40-205ENST00000555052 SLC51BQ86UW2 128 aa9.84□□□□□ -0.83
ARHGEF40-205ENST00000555052 IGKV2-24A0A0C4DH68 120 aa9.83□□□□□ -0.84
ARHGEF40-205ENST00000555052 FAM231BA6NCW3 169 aa9.83□□□□□ -0.84
ARHGEF40-205ENST00000555052 ZNF25P17030 456 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF40-205ENST00000555052 PRR3P79522 188 aaKnown RBP9.83□□□□□ -0.84
ARHGEF40-205ENST00000555052 TEX261Q6UWH6 196 aa9.83□□□□□ -0.84
ARHGEF40-205ENST00000555052 TCTE3Q8IZS6 198 aa9.83□□□□□ -0.84
ARHGEF40-205ENST00000555052 A0A096LNI7 61 aa9.82□□□□□ -0.84
ARHGEF40-205ENST00000555052 TRBV6-5A0A0K0K1A5 114 aa9.82□□□□□ -0.84
ARHGEF40-205ENST00000555052 SMIM15Q7Z3B0 74 aa9.82□□□□□ -0.84
ARHGEF40-205ENST00000555052 STPG4Q8N801 248 aa9.82□□□□□ -0.84
ARHGEF40-205ENST00000555052 OR5A1Q8NGJ0 315 aa9.82□□□□□ -0.84
ARHGEF40-205ENST00000555052 ESDP10768 282 aa9.81□□□□□ -0.84
ARHGEF40-205ENST00000555052 FAM231DQ6ZW35 169 aa9.81□□□□□ -0.84
ARHGEF40-205ENST00000555052 TMEM250H0YL14 139 aa9.8□□□□□ -0.84
ARHGEF40-205ENST00000555052 I3L3M4 83 aa9.8□□□□□ -0.84
ARHGEF40-205ENST00000555052 GAS8-AS1O95177 125 aa9.8□□□□□ -0.84
ARHGEF40-205ENST00000555052 XCL1P47992 114 aa9.8□□□□□ -0.84
ARHGEF40-205ENST00000555052 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
ARHGEF40-205ENST00000555052 LINC00959A0A1B0GUT2 108 aa9.79□□□□□ -0.84
ARHGEF40-205ENST00000555052 A8MWL6 223 aa9.79□□□□□ -0.84
ARHGEF40-205ENST00000555052 GATCO43716 136 aaKnown RBP9.79□□□□□ -0.84
ARHGEF40-205ENST00000555052 TSHBP01222 138 aa9.79□□□□□ -0.84
ARHGEF40-205ENST00000555052 CT83Q5H943 113 aa9.79□□□□□ -0.84
ARHGEF40-205ENST00000555052 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 CCL25O15444 150 aa9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 PMCHP20382 165 aa9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 MRPL52Q86TS9 123 aaKnown RBP9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 LYPD6BQ8NI32 183 aa9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 TMEM242Q9NWH2 141 aa9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 LINC00474Q9P2X8 69 aa9.78□□□□□ -0.84
ARHGEF40-205ENST00000555052 TMEM101Q96IK0 257 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms