RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 EMP1P54849 157 aa15.39■□□□□ 0.05
ARHGEF40-204ENST00000555038 AMELXQ99217 191 aa15.39■□□□□ 0.05
ARHGEF40-204ENST00000555038 SPANXA1Q9NS26 97 aa15.39■□□□□ 0.05
ARHGEF40-204ENST00000555038 TMEM238LA0A1B0GVL6 79 aa15.39■□□□□ 0.05
ARHGEF40-204ENST00000555038 A6NJY4 79 aa15.39■□□□□ 0.05
ARHGEF40-204ENST00000555038 C12orf74Q32Q52 190 aa15.39■□□□□ 0.05
ARHGEF40-204ENST00000555038 NACAE9PAV3 2078 aa15.38■□□□□ 0.05
ARHGEF40-204ENST00000555038 FOSL1P15407 271 aa15.38■□□□□ 0.05
ARHGEF40-204ENST00000555038 Q6ZSN1 163 aa15.38■□□□□ 0.05
ARHGEF40-204ENST00000555038 RNASE8Q8TDE3 154 aaKnown RBP15.38■□□□□ 0.05
ARHGEF40-204ENST00000555038 TMEM263Q8WUH6 116 aaKnown RBP15.38■□□□□ 0.05
ARHGEF40-204ENST00000555038 TMEM223A0PJW6 202 aa15.37■□□□□ 0.05
ARHGEF40-204ENST00000555038 GAGE12BA1L429 117 aa15.37■□□□□ 0.05
ARHGEF40-204ENST00000555038 SPCS1Q9Y6A9 102 aa15.37■□□□□ 0.05
ARHGEF40-204ENST00000555038 LEPROTO15243 131 aa15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 AZU1P20160 251 aa15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 OPRPNQ99935 248 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 SPANXB1Q9NS25 103 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 ADARB2-AS1A8MUL3 147 aa15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 J3QQQ9 107 aa15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 K7ERJ3 54 aa15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 CHCHD7Q9BUK0 85 aa15.36■□□□□ 0.05
ARHGEF40-204ENST00000555038 ZNF22P17026 224 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF40-204ENST00000555038 LGALS3P17931 250 aaKnown RBP15.35■□□□□ 0.05
ARHGEF40-204ENST00000555038 COTL1Q14019 142 aa15.35■□□□□ 0.05
ARHGEF40-204ENST00000555038 A0A0J9YY99 117 aa15.34■□□□□ 0.05
ARHGEF40-204ENST00000555038 PLEKHB2Q96CS7 222 aa15.34■□□□□ 0.05
ARHGEF40-204ENST00000555038 NAA38Q9BRA0 125 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-204ENST00000555038 TRBV10-1A0A0K0K1A3 114 aa15.34■□□□□ 0.05
ARHGEF40-204ENST00000555038 IGLL5B9A064 214 aa15.34■□□□□ 0.05
ARHGEF40-204ENST00000555038 MRPS36P82909 103 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-204ENST00000555038 C1QTNF4Q9BXJ3 329 aa15.34■□□□□ 0.05
ARHGEF40-204ENST00000555038 SRSF9Q13242 221 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■□□□□ 8.7
ARHGEF40-204ENST00000555038 UBE2D4Q9Y2X8 147 aa15.33■□□□□ 0.04
ARHGEF40-204ENST00000555038 IGHV3OR16-12A0A075B7B8 117 aa15.32■□□□□ 0.04
ARHGEF40-204ENST00000555038 TRGV1A0A0A0MS02 117 aa15.32■□□□□ 0.04
ARHGEF40-204ENST00000555038 TSPEAR-AS2P59090 65 aa15.32■□□□□ 0.04
ARHGEF40-204ENST00000555038 DAZ2Q13117 558 aaKnown RBP15.32■□□□□ 0.04
ARHGEF40-204ENST00000555038 FAM104AQ969W3 186 aa15.32■□□□□ 0.04
ARHGEF40-204ENST00000555038 TRAV4A0A0B4J268 109 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 A0A0J9YXV3 536 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 NDUFA11Q86Y39 141 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 SLC25A29Q8N8R3 303 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 TIMM21Q9BVV7 248 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 C19orf73Q9NVV2 129 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 CIDEAO60543 219 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 C16orf74Q96GX8 76 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 ZNF479Q96JC4 524 aa15.31■□□□□ 0.04
ARHGEF40-204ENST00000555038 RRN3P1Q2M238 152 aa15.3■□□□□ 0.04
ARHGEF40-204ENST00000555038 FLNBO75369 2602 aaKnown RBP15.3■□□□□ 0.04
ARHGEF40-204ENST00000555038 Q9UF83 564 aa15.29■□□□□ 0.04
ARHGEF40-204ENST00000555038 ITPR2Q14571 2701 aa15.29■□□□□ 0.04
ARHGEF40-204ENST00000555038 TINCRA0A1B0GVN0 87 aa15.29■□□□□ 0.04
ARHGEF40-204ENST00000555038 GIG44P09565 113 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF40-204ENST00000555038 UBE2D1P51668 147 aa15.29■□□□□ 0.04
ARHGEF40-204ENST00000555038 RPL36AP83881 106 aaKnown RBP15.28■□□□□ 0.04
ARHGEF40-204ENST00000555038 RPL36ALQ969Q0 106 aaKnown RBP15.28■□□□□ 0.04
ARHGEF40-204ENST00000555038 K7EQD1 137 aa15.27■□□□□ 0.04
ARHGEF40-204ENST00000555038 OCIAD2Q56VL3 154 aa15.27■□□□□ 0.04
ARHGEF40-204ENST00000555038 DAZ4Q86SG3 579 aaKnown RBP15.26■□□□□ 0.03
ARHGEF40-204ENST00000555038 DAZ3Q9NR90 486 aaKnown RBP15.26■□□□□ 0.03
ARHGEF40-204ENST00000555038 CBY1Q9Y3M2 126 aa15.26■□□□□ 0.03
ARHGEF40-204ENST00000555038 Q6ZTI0 123 aa15.26■□□□□ 0.03
ARHGEF40-204ENST00000555038 WNK1Q9H4A3 2382 aa15.25■□□□□ 0.03
ARHGEF40-204ENST00000555038 ACANP16112 2415 aa15.25■□□□□ 0.03
ARHGEF40-204ENST00000555038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF40-204ENST00000555038 IGKV2-29A2NJV5 120 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF40-204ENST00000555038 IGHV3-30P01768 117 aa15.25■□□□□ 0.03
ARHGEF40-204ENST00000555038 IGHV3-30-5P0DP03 117 aa15.25■□□□□ 0.03
ARHGEF40-204ENST00000555038 SMAGPQ0VAQ4 97 aa15.25■□□□□ 0.03
ARHGEF40-204ENST00000555038 NF1P21359 2839 aa15.24■□□□□ 0.03
ARHGEF40-204ENST00000555038 K7ERU9 68 aa15.24■□□□□ 0.03
ARHGEF40-204ENST00000555038 OVOL2Q9BRP0 275 aa15.24■□□□□ 0.03
ARHGEF40-204ENST00000555038 IGHV3-38A0A0C4DH36 116 aa15.24■□□□□ 0.03
ARHGEF40-204ENST00000555038 CEMP1Q6PRD7 247 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF40-204ENST00000555038 CSNK1G2-AS1Q8NCQ2 148 aa15.24■□□□□ 0.03
ARHGEF40-204ENST00000555038 IGHV1-58A0A0C4DH39 117 aa15.23■□□□□ 0.03
ARHGEF40-204ENST00000555038 LY6G6DO95868 133 aa15.23■□□□□ 0.03
ARHGEF40-204ENST00000555038 RBX1P62877 108 aa15.23■□□□□ 0.03
ARHGEF40-204ENST00000555038 IGHV3-30-3P0DP02 117 aa15.22■□□□□ 0.03
ARHGEF40-204ENST00000555038 Q6ZUT4 128 aa15.22■□□□□ 0.03
ARHGEF40-204ENST00000555038 NOP10Q9NPE3 64 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-204ENST00000555038 CSDC2Q9Y534 153 aaKnown RBP15.22■□□□□ 0.03
ARHGEF40-204ENST00000555038 PLAC8L1A1L4L8 177 aa15.21■□□□□ 0.03
ARHGEF40-204ENST00000555038 TMEM238C9JI98 176 aa15.21■□□□□ 0.03
ARHGEF40-204ENST00000555038 PF4P02776 101 aa15.21■□□□□ 0.03
ARHGEF40-204ENST00000555038 RPL35AP18077 110 aaKnown RBP15.21■□□□□ 0.03
ARHGEF40-204ENST00000555038 TIRAPP58753 221 aa15.21■□□□□ 0.03
ARHGEF40-204ENST00000555038 SMR3AQ99954 134 aa15.21■□□□□ 0.03
ARHGEF40-204ENST00000555038 UBE2D3P61077 147 aa15.21■□□□□ 0.02
ARHGEF40-204ENST00000555038 UBE2D2P62837 147 aa15.21■□□□□ 0.02
ARHGEF40-204ENST00000555038 DGAT2L7PQ6IED9 249 aa15.21■□□□□ 0.02
ARHGEF40-204ENST00000555038 LINC00482Q8N8I6 264 aa15.21■□□□□ 0.02
ARHGEF40-204ENST00000555038 WFDC10AQ9H1F0 79 aa15.21■□□□□ 0.02
ARHGEF40-204ENST00000555038 PGPEP1Q9NXJ5 209 aa15.2■□□□□ 0.02
ARHGEF40-204ENST00000555038 IGLV5-45A0A087WSX0 123 aa15.19■□□□□ 0.02
ARHGEF40-204ENST00000555038 TRBV6-4A0A1B0GX49 114 aa15.19■□□□□ 0.02
ARHGEF40-204ENST00000555038 KRTAP10-3P60369 221 aa15.19■□□□□ 0.02
ARHGEF40-204ENST00000555038 LYRM7Q5U5X0 104 aa15.19■□□□□ 0.02
ARHGEF40-204ENST00000555038 GTSF1LQ9H1H1 148 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms