RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 IGLV2-8P01709 118 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 IGHV3-30P01768 117 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 IGHV3-33P01772 117 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 SRP19P09132 144 aaKnown RBP3.19□□□□□ -1.9
ATXN3-231ENST00000554994 IGHV3-30-3P0DP02 117 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 IGHV3-30-5P0DP03 117 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-231ENST00000554994 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-231ENST00000554994 RHOHQ15669 191 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 TMEM241Q24JQ0 296 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 FER1L6-AS1Q8NA97 138 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 ZNRF2Q8NHG8 242 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 FRZBQ92765 325 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 C11orf52Q96A22 123 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 PGLYRP4Q96LB8 373 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 IGHV3-38A0A0C4DH36 116 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 A8MWL6 223 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 TMEM262E9PQX1 116 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 F2Z2F3 143 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 TMEM250H0YL14 139 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 K7EN84 100 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 RHODO00212 210 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 SMR3BP02814 79 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-231ENST00000554994 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 NTF3P20783 257 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 EVI2AP22794 236 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 CACNG7P62955 275 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 LRP2P98164 4655 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 ADIRFQ15847 76 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 KCNIP4Q6PIL6 250 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 COX8CQ7Z4L0 72 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 SH2D6Q7Z4S9 175 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 SPATA12Q7Z6I5 190 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 NRACQ8N912 160 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 PRSS3P2Q8NHM4 247 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 DEFB104AQ8WTQ1 72 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 PTH2Q96A98 100 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 CTDSP1Q9GZU7 261 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 RPP21Q9H633 154 aaKnown RBP3.18□□□□□ -1.9
ATXN3-231ENST00000554994 MSRB1Q9NZV6 116 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 Q9UF83 564 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 MRPS16Q9Y3D3 137 aaKnown RBP3.18□□□□□ -1.9
ATXN3-231ENST00000554994 LY96Q9Y6Y9 160 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 URGCP-MRPS24S4R325 110 aa3.18□□□□□ -1.9
ATXN3-231ENST00000554994 MUC2Q02817 5179 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 A0A1W2PPQ1 181 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 PSCAO43653 123 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 CRYGDP07320 174 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 RAB4BP61018 213 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 RPL36AP83881 106 aaKnown RBP3.17□□□□□ -1.9
ATXN3-231ENST00000554994 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 OR10G8Q8NGN5 311 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 SMIM12Q96EX1 92 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 GTSF1LQ9H1H1 148 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 Q9HAA7 133 aa3.17□□□□□ -1.9
ATXN3-231ENST00000554994 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 SNAI2O43623 268 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 SNRPEP62304 92 aaKnown RBP3.16□□□□□ -1.9
ATXN3-231ENST00000554994 LBHQ53QV2 105 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-231ENST00000554994 TTC32Q5I0X7 151 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 Q6ZR54 194 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 AP1S3Q96PC3 154 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 NAT8Q9UHE5 227 aa3.16□□□□□ -1.9
ATXN3-231ENST00000554994 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 A0A087WX48 190 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 H7C1H1 209 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 CXCL1P09341 107 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 IGLC6P0CF74 106 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 CAMPP49913 170 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 FOXA3P55318 350 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-231ENST00000554994 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
ATXN3-231ENST00000554994 HAMPP81172 84 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 RIGQ13278 110 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 PIK3CD-AS1Q5SR53 167 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 LELP1Q5T871 98 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 LINC01551Q86U37 167 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 NEXN-AS1Q8NBZ9 246 aa3.15□□□□□ -1.91
ATXN3-231ENST00000554994 DPH3P1Q9H4G8 78 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 350.6 ms