RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 K7EMI3 77 aa11.25□□□□□ -0.61
SPTLC2-203ENST00000554901 K7EP13 123 aa11.25□□□□□ -0.61
SPTLC2-203ENST00000554901 AMTP48728 403 aa11.25□□□□□ -0.61
SPTLC2-203ENST00000554901 NXT2Q9NPJ8 142 aaKnown RBP11.25□□□□□ -0.61
SPTLC2-203ENST00000554901 TSHBP01222 138 aa11.24□□□□□ -0.61
SPTLC2-203ENST00000554901 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
SPTLC2-203ENST00000554901 FCER1GP30273 86 aa11.24□□□□□ -0.61
SPTLC2-203ENST00000554901 Q8N8P6 123 aa11.24□□□□□ -0.61
SPTLC2-203ENST00000554901 TMEM243Q9BU79 118 aa11.24□□□□□ -0.61
SPTLC2-203ENST00000554901 CHCHD7Q9BUK0 85 aa11.24□□□□□ -0.61
SPTLC2-203ENST00000554901 IGLV2-18A0A075B6J9 118 aa11.23□□□□□ -0.61
SPTLC2-203ENST00000554901 WFDC10BQ8IUB3 73 aa11.23□□□□□ -0.61
SPTLC2-203ENST00000554901 H7C423 109 aa11.22□□□□□ -0.61
SPTLC2-203ENST00000554901 TRGC2P03986 189 aa11.22□□□□□ -0.61
SPTLC2-203ENST00000554901 LINC01556Q5JQF7 62 aa11.22□□□□□ -0.61
SPTLC2-203ENST00000554901 NIT1Q86X76 327 aa11.22□□□□□ -0.61
SPTLC2-203ENST00000554901 CHCHD5Q9BSY4 110 aa11.22□□□□□ -0.61
SPTLC2-203ENST00000554901 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
SPTLC2-203ENST00000554901 ESDP10768 282 aa11.21□□□□□ -0.61
SPTLC2-203ENST00000554901 ALMS1Q8TCU4 4167 aa11.2□□□□□ -0.62
SPTLC2-203ENST00000554901 TRAV9-2A0A087WT02 112 aa11.2□□□□□ -0.62
SPTLC2-203ENST00000554901 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
SPTLC2-203ENST00000554901 VPS13DQ5THJ4 4388 aa11.2□□□□□ -0.62
SPTLC2-203ENST00000554901 A0A087WX48 190 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 UBE2L6O14933 153 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 C10orf126Q8N4M7 172 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 PRSS3P2Q8NHM4 247 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 LYSTQ99698 3801 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 SMAGPQ0VAQ4 97 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
SPTLC2-203ENST00000554901 A0A1B0GUV1 79 aa11.18□□□□□ -0.62
SPTLC2-203ENST00000554901 LINC01546A6NGU7 62 aa11.18□□□□□ -0.62
SPTLC2-203ENST00000554901 TMEM262E9PQX1 116 aa11.18□□□□□ -0.62
SPTLC2-203ENST00000554901 G0S2P27469 103 aa11.18□□□□□ -0.62
SPTLC2-203ENST00000554901 DEFB104AQ8WTQ1 72 aa11.18□□□□□ -0.62
SPTLC2-203ENST00000554901 NBDYA0A0U1RRE5 68 aa11.17□□□□□ -0.62
SPTLC2-203ENST00000554901 ZNF25P17030 456 aaPredicted RBP11.17□□□□□ -0.62
SPTLC2-203ENST00000554901 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
SPTLC2-203ENST00000554901 RAB5BP61020 215 aa11.17□□□□□ -0.62
SPTLC2-203ENST00000554901 LAGE3Q14657 143 aa11.17□□□□□ -0.62
SPTLC2-203ENST00000554901 C20orf203Q8NBC4 194 aa11.17□□□□□ -0.62
SPTLC2-203ENST00000554901 DNAH1Q9P2D7 4330 aa11.17□□□□□ -0.62
SPTLC2-203ENST00000554901 GAGE6Q13070 117 aa11.16□□□□□ -0.62
SPTLC2-203ENST00000554901 FA2HQ7L5A8 372 aa11.16□□□□□ -0.62
SPTLC2-203ENST00000554901 MRPL52Q86TS9 123 aaKnown RBP11.16□□□□□ -0.62
SPTLC2-203ENST00000554901 MPV17L2Q567V2 206 aa11.15□□□□□ -0.62
SPTLC2-203ENST00000554901 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 IGKV2-29A2NJV5 120 aaPredicted RBP11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 RBX1P62877 108 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 Q0VG73 95 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 AMMECR1LQ6DCA0 310 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 Q6ZR54 194 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 AP5S1Q9NUS5 200 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 LINC00614P0C842 121 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 FGF6P10767 208 aa11.14□□□□□ -0.63
SPTLC2-203ENST00000554901 IBA57-AS1B1ANH7 110 aa11.13□□□□□ -0.63
SPTLC2-203ENST00000554901 TMEM101Q96IK0 257 aa11.13□□□□□ -0.63
SPTLC2-203ENST00000554901 Q8N976 141 aa11.12□□□□□ -0.63
SPTLC2-203ENST00000554901 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-203ENST00000554901 CYSLTR1Q9Y271 337 aa11.12□□□□□ -0.63
SPTLC2-203ENST00000554901 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-203ENST00000554901 Q8N3U1 123 aa11.11□□□□□ -0.63
SPTLC2-203ENST00000554901 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
SPTLC2-203ENST00000554901 SPANXA1Q9NS26 97 aa11.11□□□□□ -0.63
SPTLC2-203ENST00000554901 UBE2D4Q9Y2X8 147 aa11.11□□□□□ -0.63
SPTLC2-203ENST00000554901 KMT2CQ8NEZ4 4911 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-203ENST00000554901 SACSQ9NZJ4 4579 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 ANGP03950 147 aaKnown RBP11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 BAGE3Q86Y29 109 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 KLK12Q9UKR0 248 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 PYGO1Q9Y3Y4 419 aa11.1□□□□□ -0.63
SPTLC2-203ENST00000554901 TRAV8-3A0A0A6YYJ7 113 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BKO60814 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BJP06899 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 NPSP0C0P6 89 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BOP23527 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BBP33778 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BDP58876 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BCP62807 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 RPL39P62891 51 aaKnown RBP11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST2H2BEQ16778 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BHQ93079 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BNQ99877 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 HIST1H2BMQ99879 126 aa11.09□□□□□ -0.63
SPTLC2-203ENST00000554901 PRR34Q9NV39 138 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms