RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NPVFQ9HCQ7 196 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 ANKHD1Q8IWZ3 2542 aaKnown RBP0.21□□□□□ -2.38
SCFD1-213ENST00000554776 PRDM2Q13029 1718 aa0.21□□□□□ -2.38
SCFD1-213ENST00000554776 OTOGQ6ZRI0 2925 aa0.2□□□□□ -2.38
SCFD1-213ENST00000554776 SPAARA0A1B0GVQ0 90 aa0.2□□□□□ -2.38
SCFD1-213ENST00000554776 Q5BKY6 102 aa0.2□□□□□ -2.38
SCFD1-213ENST00000554776 FAM213BQ8TBF2 198 aa0.2□□□□□ -2.38
SCFD1-213ENST00000554776 NAA60Q9H7X0 242 aa0.2□□□□□ -2.38
SCFD1-213ENST00000554776 SPTBN4Q9H254 2564 aa0.2□□□□□ -2.38
SCFD1-213ENST00000554776 PATJQ8NI35 1801 aa0.2□□□□□ -2.38
SCFD1-213ENST00000554776 CELSR2Q9HCU4 2923 aa0.19□□□□□ -2.38
SCFD1-213ENST00000554776 MRC1P22897 1456 aa0.19□□□□□ -2.38
SCFD1-213ENST00000554776 SPINK1P00995 79 aa0.19□□□□□ -2.38
SCFD1-213ENST00000554776 ROCK2O75116 1388 aaKnown RBP0.19□□□□□ -2.38
SCFD1-213ENST00000554776 AHCTF1Q8WYP5 2266 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 STAB1Q9NY15 2570 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 PIGBOS1A0A0B4J2F0 54 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 CATR1Q13166 79 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 C12orf73Q69YU5 71 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 TSLPQ969D9 159 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 CACNA1CQ13936 2221 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 ASXL3Q9C0F0 2248 aa0.18□□□□□ -2.38
SCFD1-213ENST00000554776 ZNF236Q9UL36 1845 aa0.17□□□□□ -2.38
SCFD1-213ENST00000554776 CTXND1A0A1B0GTU2 59 aa0.17□□□□□ -2.38
SCFD1-213ENST00000554776 M0R135 149 aa0.17□□□□□ -2.38
SCFD1-213ENST00000554776 Q56UQ5 140 aa0.17□□□□□ -2.38
SCFD1-213ENST00000554776 SCN3BQ9NY72 215 aa0.17□□□□□ -2.38
SCFD1-213ENST00000554776 R4GMQ9 66 aa0.17□□□□□ -2.38
SCFD1-213ENST00000554776 COL6A3P12111 3177 aa0.17□□□□□ -2.38
SCFD1-213ENST00000554776 FLNAP21333 2647 aaKnown RBP0.17□□□□□ -2.38
SCFD1-213ENST00000554776 CHD9Q3L8U1 2897 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 PPIP5K1Q6PFW1 1433 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 DOCK2Q92608 1830 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 A0A1B0GV90 55 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 SPAG11BQ08648 103 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 Q5VV11 94 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 RPL13AP3Q6NVV1 102 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 SPAG11AQ6PDA7 123 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 V9GYH0 126 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 CACNA1AO00555 2505 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 BPTFQ12830 3046 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 PXDNQ92626 1479 aa0.16□□□□□ -2.38
SCFD1-213ENST00000554776 NSD1Q96L73 2696 aaPredicted RBP0.15□□□□□ -2.39
SCFD1-213ENST00000554776 NAIPQ13075 1403 aa0.15□□□□□ -2.39
SCFD1-213ENST00000554776 AKAIN1P0CW23 69 aa0.15□□□□□ -2.39
SCFD1-213ENST00000554776 C1orf54Q8WWF1 131 aa0.15□□□□□ -2.39
SCFD1-213ENST00000554776 PRO0255Q9UI72 69 aa0.15□□□□□ -2.39
SCFD1-213ENST00000554776 PI4KAP42356 2102 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 CPSF1Q10570 1443 aaKnown RBP0.14□□□□□ -2.39
SCFD1-213ENST00000554776 IGSF10Q6WRI0 2623 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 OOSP1A8MZH6 123 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 SNAPC5O75971 98 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 APOC2P02655 101 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 FGF7P21781 194 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 BTG2P78543 158 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 HAMPP81172 84 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 PPP3R2Q96LZ3 170 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 LENEPQ9Y5L5 61 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
SCFD1-213ENST00000554776 ROBO1Q9Y6N7 1651 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 VWFP04275 2813 aa0.14□□□□□ -2.39
SCFD1-213ENST00000554776 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
SCFD1-213ENST00000554776 ZNF609O15014 1411 aa0.13□□□□□ -2.39
SCFD1-213ENST00000554776 RIF1Q5UIP0 2472 aaKnown RBP0.13□□□□□ -2.39
SCFD1-213ENST00000554776 PP6455Q8WZ26 134 aa0.13□□□□□ -2.39
SCFD1-213ENST00000554776 QRICH2Q9H0J4 1663 aa0.13□□□□□ -2.39
SCFD1-213ENST00000554776 HIVEP1P15822 2718 aa0.13□□□□□ -2.39
SCFD1-213ENST00000554776 PKD1L2Q7Z442 2459 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 CUL7Q14999 1698 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 NCOR1O75376 2440 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 FAM208BQ5VWN6 2430 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 PIN1P1O15428 100 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 SPINK8P0C7L1 97 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 IFITM1P13164 125 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 SARNPP82979 210 aaKnown RBP0.12□□□□□ -2.39
SCFD1-213ENST00000554776 MRPL54Q6P161 138 aaKnown RBP0.12□□□□□ -2.39
SCFD1-213ENST00000554776 NDUFA4L2Q9NRX3 87 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 LINC00474Q9P2X8 69 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 UBR5O95071 2799 aaPredicted RBP0.12□□□□□ -2.39
SCFD1-213ENST00000554776 COL6A5A8TX70 2615 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 HECTD1Q9ULT8 2610 aa0.12□□□□□ -2.39
SCFD1-213ENST00000554776 ZNF292O60281 2723 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 WNK3Q9BYP7 1800 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 TNRC18O15417 2968 aaPredicted RBP0.11□□□□□ -2.39
SCFD1-213ENST00000554776 UBR4Q5T4S7 5183 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 TRBV7-3A0A075B6L6 115 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 BCE1O60756 84 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 IFNGP01579 166 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 C9orf153Q5TBE3 101 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 SPANXDQ9BXN6 97 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 USP9XQ93008 2570 aaPredicted RBP0.11□□□□□ -2.39
SCFD1-213ENST00000554776 SPTBN2O15020 2390 aa0.11□□□□□ -2.39
SCFD1-213ENST00000554776 TEP1Q99973 2627 aaKnown RBP0.11□□□□□ -2.39
SCFD1-213ENST00000554776 KMT2CQ8NEZ4 4911 aaKnown RBP0.11□□□□□ -2.39
SCFD1-213ENST00000554776 ANKRD11Q6UB99 2663 aaPredicted RBP0.1□□□□□ -2.39
SCFD1-213ENST00000554776 PLXNB2O15031 1838 aa0.1□□□□□ -2.39
SCFD1-213ENST00000554776 PSME4Q14997 1843 aa0.1□□□□□ -2.39
SCFD1-213ENST00000554776 STAB2Q8WWQ8 2551 aa0.1□□□□□ -2.39
SCFD1-213ENST00000554776 MAP1AP78559 2803 aaPredicted RBP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms