RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 RPL39P62891 51 aaKnown RBP13□□□□□ -0.33
MEG3-224ENST00000554639 CEND1Q8N111 149 aa13□□□□□ -0.33
MEG3-224ENST00000554639 ATP6V0E2Q8NHE4 81 aa13□□□□□ -0.33
MEG3-224ENST00000554639 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
MEG3-224ENST00000554639 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
MEG3-224ENST00000554639 IGLV4-69A0A075B6H9 119 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 TCTAP57738 103 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 SONP18583 2426 aaKnown RBP12.99□□□□□ -0.33
MEG3-224ENST00000554639 MYMXA0A1B0GTQ4 84 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 GCSHP23434 173 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 FXYD2P54710 66 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 UNC79Q9P2D8 2635 aa12.99□□□□□ -0.33
MEG3-224ENST00000554639 ZNF469Q96JG9 3925 aaPredicted RBP12.98□□□□□ -0.33
MEG3-224ENST00000554639 IGLL5B9A064 214 aa12.98□□□□□ -0.33
MEG3-224ENST00000554639 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
MEG3-224ENST00000554639 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
MEG3-224ENST00000554639 SMR3AQ99954 134 aa12.97□□□□□ -0.33
MEG3-224ENST00000554639 VCX2Q9H322 139 aa12.97□□□□□ -0.33
MEG3-224ENST00000554639 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.33
MEG3-224ENST00000554639 MRPL16Q9NX20 251 aaKnown RBP12.96□□□□□ -0.33
MEG3-224ENST00000554639 MAPKAPK5-AS1Q8N8E1 139 aa12.96□□□□□ -0.34
MEG3-224ENST00000554639 C16orf74Q96GX8 76 aa12.96□□□□□ -0.34
MEG3-224ENST00000554639 PRADC1Q9BSG0 188 aa12.96□□□□□ -0.34
MEG3-224ENST00000554639 IGHV3-73A0A0B4J1V6 119 aa12.95□□□□□ -0.34
MEG3-224ENST00000554639 TRBV10-1A0A0K0K1A3 114 aa12.95□□□□□ -0.34
MEG3-224ENST00000554639 A0A1B0GWB2 263 aa12.95□□□□□ -0.34
MEG3-224ENST00000554639 INSL3P51460 131 aa12.95□□□□□ -0.34
MEG3-224ENST00000554639 GAGE13Q4V321 117 aa12.95□□□□□ -0.34
MEG3-224ENST00000554639 ZNF479Q96JC4 524 aa12.95□□□□□ -0.34
MEG3-224ENST00000554639 SPANXA1Q9NS26 97 aa12.95□□□□□ -0.34
MEG3-224ENST00000554639 TRAV4A0A0B4J268 109 aa12.94□□□□□ -0.34
MEG3-224ENST00000554639 PF4P02776 101 aa12.94□□□□□ -0.34
MEG3-224ENST00000554639 PRM2P04554 102 aa12.94□□□□□ -0.34
MEG3-224ENST00000554639 WFDC2Q14508 124 aa12.94□□□□□ -0.34
MEG3-224ENST00000554639 TTTY13Q9BZ97 58 aa12.94□□□□□ -0.34
MEG3-224ENST00000554639 PRO0461Q9UI25 63 aa12.94□□□□□ -0.34
MEG3-224ENST00000554639 LINC00482Q8N8I6 264 aa12.93□□□□□ -0.34
MEG3-224ENST00000554639 ANK3Q12955 4377 aaKnown RBP12.93□□□□□ -0.34
MEG3-224ENST00000554639 NBPF19A0A087WUL8 3843 aa12.93□□□□□ -0.34
MEG3-224ENST00000554639 IGLV4-3A0A075B6K6 122 aa12.93□□□□□ -0.34
MEG3-224ENST00000554639 NACAE9PAV3 2078 aa12.93□□□□□ -0.34
MEG3-224ENST00000554639 ITPR2Q14571 2701 aa12.92□□□□□ -0.34
MEG3-224ENST00000554639 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
MEG3-224ENST00000554639 Q6ZSN1 163 aa12.92□□□□□ -0.34
MEG3-224ENST00000554639 AMELXQ99217 191 aa12.92□□□□□ -0.34
MEG3-224ENST00000554639 NHP2Q9NX24 153 aaKnown RBP12.92□□□□□ -0.34
MEG3-224ENST00000554639 IGHV3OR16-12A0A075B7B8 117 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 TRGV1A0A0A0MS02 117 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 RRN3P1Q2M238 152 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 C12orf74Q32Q52 190 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 KRTAP10-3P60369 221 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 CHCHD7Q9BUK0 85 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
MEG3-224ENST00000554639 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
MEG3-224ENST00000554639 ZNRF2Q8NHG8 242 aa12.9□□□□□ -0.34
MEG3-224ENST00000554639 GEMIN7Q9H840 131 aaKnown RBP12.9□□□□□ -0.34
MEG3-224ENST00000554639 HIVEP2P31629 2446 aa12.89□□□□□ -0.35
MEG3-224ENST00000554639 ZNF815PA8K554 130 aa12.89□□□□□ -0.35
MEG3-224ENST00000554639 H3BMG7 143 aa12.89□□□□□ -0.35
MEG3-224ENST00000554639 TMEM170BQ5T4T1 132 aa12.89□□□□□ -0.35
MEG3-224ENST00000554639 HIST1H4GQ99525 98 aa12.89□□□□□ -0.35
MEG3-224ENST00000554639 TRBV7-3A0A075B6L6 115 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 TRAV26-1A0A087WT03 109 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 TSPAN13O95857 204 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 RPL36AP83881 106 aaKnown RBP12.88□□□□□ -0.35
MEG3-224ENST00000554639 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
MEG3-224ENST00000554639 DEFB104AQ8WTQ1 72 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 RPL36ALQ969Q0 106 aaKnown RBP12.88□□□□□ -0.35
MEG3-224ENST00000554639 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
MEG3-224ENST00000554639 ACANP16112 2415 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 AKAP9Q99996 3911 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 TMEM223A0PJW6 202 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 INAFM1C9JVW0 142 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 K7EQD1 137 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 LEPROTO15243 131 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
MEG3-224ENST00000554639 UBE2D4Q9Y2X8 147 aa12.88□□□□□ -0.35
MEG3-224ENST00000554639 C9orf66Q5T8R8 295 aa12.87□□□□□ -0.35
MEG3-224ENST00000554639 K7ERJ3 54 aa12.86□□□□□ -0.35
MEG3-224ENST00000554639 RPL35AP18077 110 aaKnown RBP12.86□□□□□ -0.35
MEG3-224ENST00000554639 FOXI1Q12951 378 aa12.86□□□□□ -0.35
MEG3-224ENST00000554639 Q6ZTI0 123 aa12.86□□□□□ -0.35
MEG3-224ENST00000554639 PLEKHB2Q96CS7 222 aa12.86□□□□□ -0.35
MEG3-224ENST00000554639 PLAC8L1A1L4L8 177 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 ZNF22P17026 224 aaPredicted RBP12.85□□□□□ -0.35
MEG3-224ENST00000554639 SCGB1D4Q6XE38 83 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 OPRPNQ99935 248 aaPredicted RBP12.85□□□□□ -0.35
MEG3-224ENST00000554639 A6NJY4 79 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 J3QQQ9 107 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 CRLF1O75462 422 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 APOMO95445 188 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
MEG3-224ENST00000554639 EMP1P54849 157 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 SH2D6Q7Z4S9 175 aa12.85□□□□□ -0.35
MEG3-224ENST00000554639 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
MEG3-224ENST00000554639 TINCRA0A1B0GVN0 87 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms