RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SNAI2O43623 268 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 IGLV2-8P01709 118 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 IGHV3-30P01768 117 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 IGHV3-33P01772 117 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 S100A9P06702 114 aaKnown RBP2.75□□□□□ -1.97
VTI1B-203ENST00000554636 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 IGHV3-30-5P0DP03 117 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 RPL35P42766 123 aaKnown RBP2.75□□□□□ -1.97
VTI1B-203ENST00000554636 SULT1A2P50226 295 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 RAB5CP51148 216 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 CENPWQ5EE01 88 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 OR10J3Q5JRS4 329 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 FAM74A4Q5TZK3 123 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 BAGE2Q86Y30 109 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 OR10AG1Q8NH19 301 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 DERL1Q9BUN8 251 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 MANBALQ9NQG1 85 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 GNG13Q9P2W3 67 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 PHLDA3Q9Y5J5 127 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 TRBV10-1A0A0K0K1A3 114 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 RAB19A4D1S5 217 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 C19orf71A6NCJ1 209 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 SCGB1D1O95968 90 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 C1QBP02746 253 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 OR5AL1P0C617 328 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 IGLC6P0CF74 106 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 BCL2P10415 239 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 XGP55808 180 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 KRTAP10-1P60331 282 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 UBE2D3P61077 147 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 UBE2D2P62837 147 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 PNRC1Q12796 327 aaPredicted RBP2.74□□□□□ -1.97
VTI1B-203ENST00000554636 WFDC2Q14508 124 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 LAGE3Q14657 143 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 EIF5AL1Q6IS14 154 aaKnown RBP2.74□□□□□ -1.97
VTI1B-203ENST00000554636 PRR27Q6MZM9 219 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 SLC51BQ86UW2 128 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 C9orf62Q8N4C0 152 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 MAPKAPK5-AS1Q8N8E1 139 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 OR10G8Q8NGN5 311 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 Q9HAA7 133 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 KIF25-AS1Q9Y6Z4 181 aa2.74□□□□□ -1.97
VTI1B-203ENST00000554636 TRBV20OR9-2A0A075B6H5 130 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 TRBV7-3A0A075B6L6 115 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 A0A087WWC5 75 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 MUC21A0A0G2JKD1 596 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 RBFOX3A6NFN3 312 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 GZMBP10144 247 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 RAB4BP61018 213 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 MEF2BQ02080 365 aaPredicted RBP2.73□□□□□ -1.97
VTI1B-203ENST00000554636 DAZ4Q86SG3 579 aaKnown RBP2.73□□□□□ -1.97
VTI1B-203ENST00000554636 AKAP14Q86UN6 197 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 NIT1Q86X76 327 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 Q8N814 137 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 SMIM12Q96EX1 92 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 DNAJC30Q96LL9 226 aa2.73□□□□□ -1.97
VTI1B-203ENST00000554636 DAZ3Q9NR90 486 aaKnown RBP2.73□□□□□ -1.97
VTI1B-203ENST00000554636 TEX46H3BTG2 121 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 PSCAO43653 123 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 PDE6DO43924 150 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 IFNA1P01562 189 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 VPREB1P12018 145 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 TAGLN2P37802 199 aaKnown RBP2.72□□□□□ -1.97
VTI1B-203ENST00000554636 CTRLP40313 264 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 GNG4P50150 75 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 RPS20P60866 119 aaKnown RBP2.72□□□□□ -1.97
VTI1B-203ENST00000554636 ZNF56Q15929 161 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 SPANXN1Q5VSR9 72 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 ATRAIDQ6UW56 229 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 FER1L6-AS1Q8NA97 138 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 OR2D3Q8NGH3 330 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 AP1S3Q96PC3 154 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 CHCHD7Q9BUK0 85 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 MED9Q9NWA0 146 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 VAX2Q9UIW0 290 aa2.72□□□□□ -1.97
VTI1B-203ENST00000554636 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.98
VTI1B-203ENST00000554636 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
VTI1B-203ENST00000554636 TRBV6-8A0A0A6YYG3 113 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 TRAV8-3A0A0A6YYJ7 113 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 K7EN84 100 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 M0QY20 66 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 P01737 135 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 MGPP08493 103 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 CACNG7P62955 275 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 HAMPP81172 84 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 MPV17L2Q567V2 206 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 ALKAL2Q6UX46 152 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 NTM-AS1Q6ZSK4 140 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 LYPD6BQ8NI32 183 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 BAALCQ8WXS3 180 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 UBE2WQ96B02 151 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 TPPP3Q9BW30 176 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 CNFNQ9BYD5 112 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 KLK12Q9UKR0 248 aa2.71□□□□□ -1.98
VTI1B-203ENST00000554636 IGKV2D-24A0A075B6R9 120 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 A0A1B0GVG6 124 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 TMEM250H0YL14 139 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 LECT2O14960 151 aa2.7□□□□□ -1.98
VTI1B-203ENST00000554636 SMIM17P0DL12 118 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms