RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 NRACQ8N912 160 aa8.61□□□□□ -1.03
SHMT2-212ENST00000554467 TRRAPQ9Y4A5 3859 aa8.61□□□□□ -1.03
SHMT2-212ENST00000554467 F5H697 171 aa8.61□□□□□ -1.03
SHMT2-212ENST00000554467 PSMB2P49721 201 aa8.61□□□□□ -1.03
SHMT2-212ENST00000554467 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
SHMT2-212ENST00000554467 IGHV4-4A0A075B6R2 117 aa8.6□□□□□ -1.03
SHMT2-212ENST00000554467 Q8N8P6 123 aa8.6□□□□□ -1.03
SHMT2-212ENST00000554467 MAP6D1Q9H9H5 199 aa8.6□□□□□ -1.03
SHMT2-212ENST00000554467 HILS1P60008 231 aa8.6□□□□□ -1.03
SHMT2-212ENST00000554467 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
SHMT2-212ENST00000554467 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
SHMT2-212ENST00000554467 SCGB3A1Q96QR1 104 aa8.6□□□□□ -1.03
SHMT2-212ENST00000554467 IGLV2-18A0A075B6J9 118 aa8.59□□□□□ -1.03
SHMT2-212ENST00000554467 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
SHMT2-212ENST00000554467 CRLF1O75462 422 aa8.59□□□□□ -1.03
SHMT2-212ENST00000554467 H3BMM0 161 aa8.59□□□□□ -1.03
SHMT2-212ENST00000554467 RASL10AQ92737 203 aa8.59□□□□□ -1.03
SHMT2-212ENST00000554467 IGHV1OR15-1A0A075B7D0 117 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 DUSP14O95147 198 aaKnown RBP8.58□□□□□ -1.04
SHMT2-212ENST00000554467 TEN1Q86WV5 123 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 PPDPFLQ8WWR9 84 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 DPH3P1Q9H4G8 78 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 ATP5LO75964 103 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 UBE2D3P61077 147 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 UBE2D2P62837 147 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 WFDC10AQ9H1F0 79 aa8.58□□□□□ -1.04
SHMT2-212ENST00000554467 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-212ENST00000554467 TRAV4A0A0B4J268 109 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 TCL1BO95988 128 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 IGHV3OR16-12A0A075B7B8 117 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 A0A087WX48 190 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 RHODO00212 210 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 ODF3L2Q3SX64 289 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 IGHV3-73A0A0B4J1V6 119 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 NDUFV3P56181 108 aaKnown RBP8.57□□□□□ -1.04
SHMT2-212ENST00000554467 KRTAP10-3P60369 221 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 SMIM2Q9BVW6 85 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 XCL2Q9UBD3 114 aa8.57□□□□□ -1.04
SHMT2-212ENST00000554467 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
SHMT2-212ENST00000554467 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
SHMT2-212ENST00000554467 SBSPONQ8IVN8 264 aa8.56□□□□□ -1.04
SHMT2-212ENST00000554467 ANKRD29Q8N6D5 301 aa8.56□□□□□ -1.04
SHMT2-212ENST00000554467 UBE2D1P51668 147 aa8.56□□□□□ -1.04
SHMT2-212ENST00000554467 ZNF876PQ49A33 203 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 ODF3Q96PU9 254 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 C16orf95Q9H693 158 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 TNFRSF18Q9Y5U5 241 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 LINC00315P59091 139 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 SUMO4Q6EEV6 95 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 KIF25-AS1Q9Y6Z4 181 aa8.55□□□□□ -1.04
SHMT2-212ENST00000554467 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 PROK1P58294 105 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 GAGE12JA6NER3 117 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 GAGE7O76087 117 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 GAGE12FP0CL80 117 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 GAGE12GP0CL81 117 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 GAGE12IP0CL82 117 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 GAGE4Q13068 117 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 ZNF56Q15929 161 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 C2orf66Q6UXQ4 117 aa8.54□□□□□ -1.04
SHMT2-212ENST00000554467 NXPH4O95158 308 aa8.53□□□□□ -1.04
SHMT2-212ENST00000554467 LINC01587Q99440 93 aa8.53□□□□□ -1.04
SHMT2-212ENST00000554467 RPL39P62891 51 aaKnown RBP8.52□□□□□ -1.05
SHMT2-212ENST00000554467 STHQ8IWL8 128 aa8.52□□□□□ -1.05
SHMT2-212ENST00000554467 SPATA3Q8NHX4 192 aa8.52□□□□□ -1.05
SHMT2-212ENST00000554467 H7C1H1 209 aa8.52□□□□□ -1.05
SHMT2-212ENST00000554467 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
SHMT2-212ENST00000554467 F8VRH5 84 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 P0DMU3 169 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 FAM231AP0DMU4 169 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 FAM231CP0DMU5 169 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 STAB1Q9NY15 2570 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 CRYGDP07320 174 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 ORMDL2Q53FV1 153 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 NDUFA11Q86Y39 141 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 RPL35AP18077 110 aaKnown RBP8.51□□□□□ -1.05
SHMT2-212ENST00000554467 PLNP26678 52 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 Q9UF83 564 aa8.51□□□□□ -1.05
SHMT2-212ENST00000554467 ZNF815PA8K554 130 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 A8MWV9 139 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 GAGE2BQ13066 116 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 TRGV11A0A075B6L2 103 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 PRADC1Q9BSG0 188 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 TRAV2A0A0B4J234 112 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 CFC1BP0CG36 223 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 CFC1P0CG37 223 aa8.5□□□□□ -1.05
SHMT2-212ENST00000554467 PKD1L1Q8TDX9 2849 aa8.49□□□□□ -1.05
SHMT2-212ENST00000554467 IFITM1P13164 125 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms