RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CYSTM1Q9H1C7 97 aa1.93□□□□□ -2.1
SCFD1-211ENST00000554437 NDUFA4L2Q9NRX3 87 aa1.93□□□□□ -2.1
SCFD1-211ENST00000554437 NINQ8N4C6 2090 aa1.93□□□□□ -2.1
SCFD1-211ENST00000554437 UNC13CQ8NB66 2214 aa1.93□□□□□ -2.1
SCFD1-211ENST00000554437 ARHGEF12Q9NZN5 1544 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 PATJQ8NI35 1801 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 SYS1-DBNDD2H3BUS1 97 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 FXYD1O00168 92 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 LINC00208Q96KT6 92 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 S100A13Q99584 98 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 NXT2Q9NPJ8 142 aaKnown RBP1.92□□□□□ -2.1
SCFD1-211ENST00000554437 V9GYV3 84 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 RTTNQ86VV8 2226 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 DOCK1Q14185 1865 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 DOCK10Q96BY6 2186 aa1.92□□□□□ -2.1
SCFD1-211ENST00000554437 DLEC1Q9Y238 1755 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 RREB1Q92766 1687 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 MLH3Q9UHC1 1453 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 PLIN4Q96Q06 1357 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 LOC285095A0A1B0GVY8 99 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 SPAG11BQ08648 103 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 C6orf52Q5T4I8 152 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 SPAG11AQ6PDA7 123 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 Q6ZQY7 126 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 CDC42SE2Q9NRR3 84 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 RABAC1Q9UI14 185 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 LRRC37A3O60309 1634 aa1.91□□□□□ -2.1
SCFD1-211ENST00000554437 PCDH15Q96QU1 1955 aa1.9□□□□□ -2.1
SCFD1-211ENST00000554437 MYH8P13535 1937 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 A0A0G2JND7 137 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 HMGN4O00479 90 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 TDRG1Q3Y452 100 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 PCOTHQ58A44 107 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 SFTA2Q6UW10 78 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 Q86TA4 180 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 V9GYH0 126 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 CHD1O14646 1710 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 NRXN2Q9P2S2 1712 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 FREM1Q5H8C1 2179 aa1.9□□□□□ -2.11
SCFD1-211ENST00000554437 RRBP1Q9P2E9 1410 aaKnown RBP1.9□□□□□ -2.11
SCFD1-211ENST00000554437 VWDEQ8N2E2 1590 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 MAGI2Q86UL8 1455 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 TNRC6AQ8NDV7 1962 aaKnown RBP1.89□□□□□ -2.11
SCFD1-211ENST00000554437 H7BZZ5 65 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 CAV3P56539 151 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 KLKP1Q107X0 134 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 TMEM170BQ5T4T1 132 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 VMO1Q7Z5L0 202 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 BPESC1Q9GZL8 116 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 R4GMQ9 66 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 ICE1Q9Y2F5 2266 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 TET3O43151 1660 aa1.89□□□□□ -2.11
SCFD1-211ENST00000554437 PHRF1Q9P1Y6 1649 aaKnown RBP1.88□□□□□ -2.11
SCFD1-211ENST00000554437 KDM5DQ9BY66 1539 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-211ENST00000554437 A0A087WTM6 91 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 A0A1W2PPM0 123 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 TMEM14DPA8MWL7 114 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 UQCRHP07919 91 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 CCL19Q99731 98 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 TNRC6BQ9UPQ9 1833 aaKnown RBP1.88□□□□□ -2.11
SCFD1-211ENST00000554437 CEP162Q5TB80 1403 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 OTOGLQ3ZCN5 2332 aa1.88□□□□□ -2.11
SCFD1-211ENST00000554437 IGLC7A0M8Q6 106 aa1.87□□□□□ -2.11
SCFD1-211ENST00000554437 CCL18P55774 89 aa1.87□□□□□ -2.11
SCFD1-211ENST00000554437 GBF1Q92538 1859 aa1.87□□□□□ -2.11
SCFD1-211ENST00000554437 ATP10BO94823 1461 aa1.87□□□□□ -2.11
SCFD1-211ENST00000554437 MRC1P22897 1456 aa1.87□□□□□ -2.11
SCFD1-211ENST00000554437 ZGRF1Q86YA3 2104 aa1.87□□□□□ -2.11
SCFD1-211ENST00000554437 MON2Q7Z3U7 1717 aa1.86□□□□□ -2.11
SCFD1-211ENST00000554437 EDC4Q6P2E9 1401 aaKnown RBP1.86□□□□□ -2.11
SCFD1-211ENST00000554437 BAHCC1Q9P281 2608 aa1.86□□□□□ -2.11
SCFD1-211ENST00000554437 EFNA4P52798 201 aa1.86□□□□□ -2.11
SCFD1-211ENST00000554437 PMCHL1Q16048 86 aa1.86□□□□□ -2.11
SCFD1-211ENST00000554437 TMEM14BQ9NUH8 114 aa1.86□□□□□ -2.11
SCFD1-211ENST00000554437 SBF2Q86WG5 1849 aa1.86□□□□□ -2.11
SCFD1-211ENST00000554437 CACNA1GO43497 2377 aa1.86□□□□□ -2.11
SCFD1-211ENST00000554437 MYO18AQ92614 2054 aaKnown RBP1.86□□□□□ -2.11
SCFD1-211ENST00000554437 TOP2BQ02880 1626 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 CHD3Q12873 2000 aaKnown RBP1.85□□□□□ -2.11
SCFD1-211ENST00000554437 TRBV25-1A0A075B6N4 114 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 ADIRFQ15847 76 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 ALKAL2Q6UX46 152 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 ZNF720Q7Z2F6 126 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 AMELXQ99217 191 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 WFDC6Q9BQY6 131 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 HIGD1BQ9P298 99 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 SPCS1Q9Y6A9 102 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 ARL2-SNX15V9GYD0 113 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 ERVK-7P63135 1459 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 EPRSP07814 1512 aaKnown RBP1.85□□□□□ -2.11
SCFD1-211ENST00000554437 ARFGEF3Q5TH69 2177 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 UNC13BO14795 1591 aa1.85□□□□□ -2.11
SCFD1-211ENST00000554437 FANCAO15360 1455 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 TRBV30A0A0K0K1B3 111 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 F8VRH5 84 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 M0R135 149 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 BCE1O60756 84 aa1.84□□□□□ -2.11
SCFD1-211ENST00000554437 SMIM11AP58511 58 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms