RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 TMEM262E9PQX1 116 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 ANGP03950 147 aaKnown RBP4.97□□□□□ -1.61
LINC00640-201ENST00000554409 WFDC2Q14508 124 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 FAM74A3Q4VXF1 159 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 ENHOQ6UWT2 76 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 TSKUQ8WUA8 353 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 UBE2WQ96B02 151 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 GFRA4Q9GZZ7 299 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 SMDT1Q9H4I9 107 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 OSTCQ9NRP0 149 aa4.97□□□□□ -1.61
LINC00640-201ENST00000554409 IGKV2D-24A0A075B6R9 120 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 CRPP02741 224 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 XGP55808 180 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 MIAQ16674 131 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 SMIM15Q7Z3B0 74 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 C15orf54Q8N8G6 183 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 Q8N976 141 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 GATD1Q8NB37 220 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 TMEM70Q9BUB7 260 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 C1orf43Q9BWL3 253 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 PRR34Q9NV39 138 aa4.96□□□□□ -1.62
LINC00640-201ENST00000554409 TRAV26-2A0A0B4J265 109 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 A0A1B0GUV1 79 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 HIGD1CA8MV81 97 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 RBX1P62877 108 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 GAGE6Q13070 117 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 PEA15Q15121 130 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 TMEM241Q24JQ0 296 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 BAALCQ8WXS3 180 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 ISOC2Q96AB3 205 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 BORCS7Q96B45 105 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 TMEM243Q9BU79 118 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 V9GYV3 84 aa4.95□□□□□ -1.62
LINC00640-201ENST00000554409 DNAH5Q8TE73 4624 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
LINC00640-201ENST00000554409 TRBV6-5A0A0K0K1A5 114 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 A0A1B0GUT8 65 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 C9JQL5 133 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 LECT2O14960 151 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 NCR2O95944 276 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 AMTP48728 403 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 RPL23P62829 140 aaKnown RBP4.94□□□□□ -1.62
LINC00640-201ENST00000554409 COTL1Q14019 142 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 C14orf177Q52M58 125 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 C20orf203Q8NBC4 194 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 TMEM191AQ9H0A3 160 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 NAT8Q9UHE5 227 aa4.94□□□□□ -1.62
LINC00640-201ENST00000554409 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.93□□□□□ -1.62
LINC00640-201ENST00000554409 UBE2L6O14933 153 aa4.93□□□□□ -1.62
LINC00640-201ENST00000554409 REG3AQ06141 175 aa4.93□□□□□ -1.62
LINC00640-201ENST00000554409 ADIRFQ15847 76 aa4.93□□□□□ -1.62
LINC00640-201ENST00000554409 KRTAP26-1Q6PEX3 210 aa4.93□□□□□ -1.62
LINC00640-201ENST00000554409 Q6ZSA8 131 aa4.93□□□□□ -1.62
LINC00640-201ENST00000554409 LINC00269Q8N2A0 174 aa4.93□□□□□ -1.62
LINC00640-201ENST00000554409 RPL39LQ96EH5 51 aaKnown RBP4.93□□□□□ -1.62
LINC00640-201ENST00000554409 NAT8BQ9UHF3 227 aa4.93□□□□□ -1.62
LINC00640-201ENST00000554409 RYR1P21817 5038 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 IGLV4-60A0A075B6I1 120 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 TRAV8-4A0A0B4J246 113 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 SDHAF1A6NFY7 115 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 EPM2AB3EWF7 344 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 H7C423 109 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 HLA-DQA1P01909 254 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 CLPSL2Q6UWE3 100 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 NUP35Q8NFH5 326 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 MRAP2Q96G30 205 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 RNF185Q96GF1 192 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 PLA2G2DQ9UNK4 145 aa4.92□□□□□ -1.62
LINC00640-201ENST00000554409 PCLOQ9Y6V0 5065 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 SMIM27A0A1W2PRY6 76 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 I3L3M4 83 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 APCSP02743 223 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 RAB4AP20338 218 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 RIGQ13278 110 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 AMN1Q8IY45 258 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 DEFB104AQ8WTQ1 72 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 FAM30AQ9NZY2 134 aa4.91□□□□□ -1.62
LINC00640-201ENST00000554409 TRBV27A0A0K0K1C4 114 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 A0A1B0GW15 77 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 GAS8-AS1O95177 125 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 PPP1R17O96001 155 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 PLA2G1BP04054 148 aaKnown RBP4.9□□□□□ -1.63
LINC00640-201ENST00000554409 ZNF25P17030 456 aaPredicted RBP4.9□□□□□ -1.63
LINC00640-201ENST00000554409 PMCHP20382 165 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 RPS10P46783 165 aaKnown RBP4.9□□□□□ -1.63
LINC00640-201ENST00000554409 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.63
LINC00640-201ENST00000554409 Q5VSD8 79 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 DGAT2L7PQ6IED9 249 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 CLRN3Q8NCR9 226 aa4.9□□□□□ -1.63
LINC00640-201ENST00000554409 IGLV10-54A0A075B6I4 117 aa4.89□□□□□ -1.63
LINC00640-201ENST00000554409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.89□□□□□ -1.63
LINC00640-201ENST00000554409 IGKV2-29A2NJV5 120 aaPredicted RBP4.89□□□□□ -1.63
LINC00640-201ENST00000554409 TSHBP01222 138 aa4.89□□□□□ -1.63
LINC00640-201ENST00000554409 PRSS1P07477 247 aa4.89□□□□□ -1.63
LINC00640-201ENST00000554409 FGF6P10767 208 aa4.89□□□□□ -1.63
LINC00640-201ENST00000554409 ESDP10768 282 aa4.89□□□□□ -1.63
LINC00640-201ENST00000554409 FAM104BQ5XKR9 115 aa4.89□□□□□ -1.63
LINC00640-201ENST00000554409 AMMECR1LQ6DCA0 310 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms