RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 NUDT10Q8NFP7 164 aa12.06□□□□□ -0.48
CPSF2-203ENST00000554290 NUDT11Q96G61 164 aa12.06□□□□□ -0.48
CPSF2-203ENST00000554290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.06□□□□□ -0.48
CPSF2-203ENST00000554290 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
CPSF2-203ENST00000554290 TAGLN2P37802 199 aaKnown RBP12.05□□□□□ -0.48
CPSF2-203ENST00000554290 AMTP48728 403 aa12.05□□□□□ -0.48
CPSF2-203ENST00000554290 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
CPSF2-203ENST00000554290 CTRLP40313 264 aa12.04□□□□□ -0.48
CPSF2-203ENST00000554290 TWIST1Q15672 202 aa12.04□□□□□ -0.48
CPSF2-203ENST00000554290 SLC51BQ86UW2 128 aa12.03□□□□□ -0.48
CPSF2-203ENST00000554290 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
CPSF2-203ENST00000554290 IGHV3-64A0A075B6Q5 118 aa12.02□□□□□ -0.49
CPSF2-203ENST00000554290 PANO1I0J062 215 aa12.02□□□□□ -0.49
CPSF2-203ENST00000554290 DPH3Q96FX2 82 aa12.02□□□□□ -0.49
CPSF2-203ENST00000554290 CNFNQ9BYD5 112 aa12.02□□□□□ -0.49
CPSF2-203ENST00000554290 RPP21Q9H633 154 aaKnown RBP12.02□□□□□ -0.49
CPSF2-203ENST00000554290 SMIM15Q7Z3B0 74 aa12.01□□□□□ -0.49
CPSF2-203ENST00000554290 TCTE3Q8IZS6 198 aa12.01□□□□□ -0.49
CPSF2-203ENST00000554290 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
CPSF2-203ENST00000554290 CFAP161Q6P656 301 aa12□□□□□ -0.49
CPSF2-203ENST00000554290 GATD1Q8NB37 220 aa12□□□□□ -0.49
CPSF2-203ENST00000554290 RNASE7Q9H1E1 156 aaKnown RBP12□□□□□ -0.49
CPSF2-203ENST00000554290 OCC1Q8TAD7 63 aa11.99□□□□□ -0.49
CPSF2-203ENST00000554290 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
CPSF2-203ENST00000554290 TRAV26-2A0A0B4J265 109 aa11.98□□□□□ -0.49
CPSF2-203ENST00000554290 K7EN84 100 aa11.98□□□□□ -0.49
CPSF2-203ENST00000554290 HNRNPA3P51991 378 aaKnown RBP11.98□□□□□ -0.49
CPSF2-203ENST00000554290 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
CPSF2-203ENST00000554290 TEX261Q6UWH6 196 aa11.98□□□□□ -0.49
CPSF2-203ENST00000554290 GAGE12HA6NDE8 117 aa11.97□□□□□ -0.49
CPSF2-203ENST00000554290 NCR2O95944 276 aa11.97□□□□□ -0.49
CPSF2-203ENST00000554290 SLPIP03973 132 aa11.97□□□□□ -0.49
CPSF2-203ENST00000554290 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
CPSF2-203ENST00000554290 H7C423 109 aa11.95□□□□□ -0.5
CPSF2-203ENST00000554290 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
CPSF2-203ENST00000554290 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
CPSF2-203ENST00000554290 A0A087WYN8 130 aa11.94□□□□□ -0.5
CPSF2-203ENST00000554290 TMEM250H0YL14 139 aa11.94□□□□□ -0.5
CPSF2-203ENST00000554290 GATCO43716 136 aaKnown RBP11.94□□□□□ -0.5
CPSF2-203ENST00000554290 APCSP02743 223 aa11.94□□□□□ -0.5
CPSF2-203ENST00000554290 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
CPSF2-203ENST00000554290 C15orf56Q8N910 161 aa11.94□□□□□ -0.5
CPSF2-203ENST00000554290 SPACA4Q8TDM5 124 aa11.94□□□□□ -0.5
CPSF2-203ENST00000554290 PLA2G2DQ9UNK4 145 aa11.94□□□□□ -0.5
CPSF2-203ENST00000554290 SDHAF1A6NFY7 115 aa11.93□□□□□ -0.5
CPSF2-203ENST00000554290 A8MWL6 223 aa11.93□□□□□ -0.5
CPSF2-203ENST00000554290 CHTF8P0CG12 524 aa11.93□□□□□ -0.5
CPSF2-203ENST00000554290 RPS10P46783 165 aaKnown RBP11.93□□□□□ -0.5
CPSF2-203ENST00000554290 Q6ZNX1 250 aa11.93□□□□□ -0.5
CPSF2-203ENST00000554290 Q6ZRU5 148 aa11.93□□□□□ -0.5
CPSF2-203ENST00000554290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
CPSF2-203ENST00000554290 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
CPSF2-203ENST00000554290 FGF6P10767 208 aa11.92□□□□□ -0.5
CPSF2-203ENST00000554290 FOXA3P55318 350 aaPredicted RBP11.92□□□□□ -0.5
CPSF2-203ENST00000554290 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
CPSF2-203ENST00000554290 FAM231DQ6ZW35 169 aa11.92□□□□□ -0.5
CPSF2-203ENST00000554290 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
CPSF2-203ENST00000554290 LRP1Q07954 4544 aaKnown RBP11.92□□□□□ -0.5
CPSF2-203ENST00000554290 PMCHP20382 165 aa11.91□□□□□ -0.5
CPSF2-203ENST00000554290 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
CPSF2-203ENST00000554290 BORCS7Q96B45 105 aa11.91□□□□□ -0.5
CPSF2-203ENST00000554290 BTF3L4Q96K17 158 aa11.91□□□□□ -0.5
CPSF2-203ENST00000554290 PLAC8Q9NZF1 115 aa11.91□□□□□ -0.5
CPSF2-203ENST00000554290 I3L3M4 83 aa11.9□□□□□ -0.5
CPSF2-203ENST00000554290 ZNF25P17030 456 aaPredicted RBP11.9□□□□□ -0.5
CPSF2-203ENST00000554290 COX6A2Q02221 97 aa11.9□□□□□ -0.5
CPSF2-203ENST00000554290 C7orf33Q8WU49 177 aa11.9□□□□□ -0.5
CPSF2-203ENST00000554290 TMEM101Q96IK0 257 aa11.9□□□□□ -0.5
CPSF2-203ENST00000554290 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
CPSF2-203ENST00000554290 NDUFS6O75380 124 aaKnown RBP11.89□□□□□ -0.51
CPSF2-203ENST00000554290 GVQW2A0A096LPI5 108 aaPredicted RBP11.88□□□□□ -0.51
CPSF2-203ENST00000554290 CEBPGP53567 150 aa11.88□□□□□ -0.51
CPSF2-203ENST00000554290 CT83Q5H943 113 aa11.88□□□□□ -0.51
CPSF2-203ENST00000554290 ALKAL2Q6UX46 152 aa11.88□□□□□ -0.51
CPSF2-203ENST00000554290 OR5A1Q8NGJ0 315 aa11.88□□□□□ -0.51
CPSF2-203ENST00000554290 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
CPSF2-203ENST00000554290 MAJINQ3KP22 176 aa11.87□□□□□ -0.51
CPSF2-203ENST00000554290 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
CPSF2-203ENST00000554290 ST20Q9HBF5 79 aa11.87□□□□□ -0.51
CPSF2-203ENST00000554290 FAM231BA6NCW3 169 aa11.86□□□□□ -0.51
CPSF2-203ENST00000554290 FOXI1Q12951 378 aa11.86□□□□□ -0.51
CPSF2-203ENST00000554290 LYPD6BQ8NI32 183 aa11.86□□□□□ -0.51
CPSF2-203ENST00000554290 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
CPSF2-203ENST00000554290 PHOX2AO14813 284 aa11.85□□□□□ -0.51
CPSF2-203ENST00000554290 XCL1P47992 114 aa11.85□□□□□ -0.51
CPSF2-203ENST00000554290 AKAP14Q86UN6 197 aa11.85□□□□□ -0.51
CPSF2-203ENST00000554290 MRAP2Q96G30 205 aa11.85□□□□□ -0.51
CPSF2-203ENST00000554290 PKIGQ9Y2B9 76 aa11.85□□□□□ -0.51
CPSF2-203ENST00000554290 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 A0A1B0GUT8 65 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 TSHBP01222 138 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 MT1HL1P0DM35 61 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 ESDP10768 282 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 SMIM7Q9BQ49 75 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
CPSF2-203ENST00000554290 TMEM191AQ9H0A3 160 aa11.84□□□□□ -0.51
CPSF2-203ENST00000554290 FAT3Q8TDW7 4589 aa11.83□□□□□ -0.52
CPSF2-203ENST00000554290 CCL25O15444 150 aa11.83□□□□□ -0.52
CPSF2-203ENST00000554290 SS18Q15532 418 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms