RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 LYPD6BQ8NI32 183 aa8.81□□□□□ -1
NEDD1-205ENST00000553609 CYTL1Q9NRR1 136 aa8.81□□□□□ -1
NEDD1-205ENST00000553609 G3V3Q6 166 aa8.8□□□□□ -1
NEDD1-205ENST00000553609 MGPP08493 103 aa8.8□□□□□ -1
NEDD1-205ENST00000553609 MED28Q9H204 178 aa8.8□□□□□ -1
NEDD1-205ENST00000553609 FXYD6-FXYD2A0A087WZ82 144 aa8.79□□□□□ -1
NEDD1-205ENST00000553609 GVQW2A0A096LPI5 108 aaPredicted RBP8.79□□□□□ -1
NEDD1-205ENST00000553609 H7C1H1 209 aa8.79□□□□□ -1
NEDD1-205ENST00000553609 SULT1A2P50226 295 aa8.79□□□□□ -1
NEDD1-205ENST00000553609 RASL11AQ6T310 242 aa8.79□□□□□ -1
NEDD1-205ENST00000553609 REG3GQ6UW15 175 aa8.79□□□□□ -1
NEDD1-205ENST00000553609 MUC2Q02817 5179 aa8.79□□□□□ -1
NEDD1-205ENST00000553609 CFAP161Q6P656 301 aa8.78□□□□□ -1
NEDD1-205ENST00000553609 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
NEDD1-205ENST00000553609 NIT2Q9NQR4 276 aa8.77□□□□□ -1.01
NEDD1-205ENST00000553609 FER1L6-AS1Q8NA97 138 aa8.76□□□□□ -1.01
NEDD1-205ENST00000553609 MBD3L1Q8WWY6 194 aa8.76□□□□□ -1.01
NEDD1-205ENST00000553609 IGKV3OR2-268A0A0C4DH90 116 aa8.75□□□□□ -1.01
NEDD1-205ENST00000553609 AMTP48728 403 aa8.75□□□□□ -1.01
NEDD1-205ENST00000553609 FOXI1Q12951 378 aa8.75□□□□□ -1.01
NEDD1-205ENST00000553609 COTL1Q14019 142 aa8.75□□□□□ -1.01
NEDD1-205ENST00000553609 TMUB2Q71RG4 321 aa8.75□□□□□ -1.01
NEDD1-205ENST00000553609 TPPP3Q9BW30 176 aa8.75□□□□□ -1.01
NEDD1-205ENST00000553609 A0A1B0GV50 99 aa8.74□□□□□ -1.01
NEDD1-205ENST00000553609 UBE2L6O14933 153 aa8.74□□□□□ -1.01
NEDD1-205ENST00000553609 RPL35P42766 123 aaKnown RBP8.74□□□□□ -1.01
NEDD1-205ENST00000553609 CACNG7P62955 275 aa8.74□□□□□ -1.01
NEDD1-205ENST00000553609 Q6ZRP5 223 aa8.74□□□□□ -1.01
NEDD1-205ENST00000553609 SFT2D1Q8WV19 159 aa8.74□□□□□ -1.01
NEDD1-205ENST00000553609 C19orf71A6NCJ1 209 aa8.73□□□□□ -1.01
NEDD1-205ENST00000553609 PFDN1O60925 122 aa8.73□□□□□ -1.01
NEDD1-205ENST00000553609 OR2D3Q8NGH3 330 aa8.73□□□□□ -1.01
NEDD1-205ENST00000553609 LINC00474Q9P2X8 69 aa8.73□□□□□ -1.01
NEDD1-205ENST00000553609 NTF3P20783 257 aa8.72□□□□□ -1.01
NEDD1-205ENST00000553609 Q6ZNX1 250 aa8.72□□□□□ -1.01
NEDD1-205ENST00000553609 FAM213BQ8TBF2 198 aa8.72□□□□□ -1.01
NEDD1-205ENST00000553609 C11orf52Q96A22 123 aa8.72□□□□□ -1.01
NEDD1-205ENST00000553609 LINC00526Q96FQ7 95 aa8.72□□□□□ -1.01
NEDD1-205ENST00000553609 ARPC5O15511 151 aa8.71□□□□□ -1.02
NEDD1-205ENST00000553609 TRGC1P0CF51 173 aa8.71□□□□□ -1.02
NEDD1-205ENST00000553609 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.02
NEDD1-205ENST00000553609 LYZL1Q6UWQ5 148 aa8.71□□□□□ -1.02
NEDD1-205ENST00000553609 KCNRGQ8N5I3 272 aa8.71□□□□□ -1.02
NEDD1-205ENST00000553609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.7□□□□□ -1.02
NEDD1-205ENST00000553609 IGKV2-29A2NJV5 120 aaPredicted RBP8.7□□□□□ -1.02
NEDD1-205ENST00000553609 F2Z2F3 143 aa8.7□□□□□ -1.02
NEDD1-205ENST00000553609 CENPWQ5EE01 88 aa8.7□□□□□ -1.02
NEDD1-205ENST00000553609 GATD1Q8NB37 220 aa8.7□□□□□ -1.02
NEDD1-205ENST00000553609 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
NEDD1-205ENST00000553609 FGF6P10767 208 aa8.69□□□□□ -1.02
NEDD1-205ENST00000553609 CTRLP40313 264 aa8.69□□□□□ -1.02
NEDD1-205ENST00000553609 CNFNQ9BYD5 112 aa8.69□□□□□ -1.02
NEDD1-205ENST00000553609 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
NEDD1-205ENST00000553609 UMAD1C9J7I0 102 aa8.68□□□□□ -1.02
NEDD1-205ENST00000553609 XCL1P47992 114 aa8.68□□□□□ -1.02
NEDD1-205ENST00000553609 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
NEDD1-205ENST00000553609 XP32Q5T750 250 aa8.68□□□□□ -1.02
NEDD1-205ENST00000553609 AMMECR1LQ6DCA0 310 aa8.68□□□□□ -1.02
NEDD1-205ENST00000553609 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
NEDD1-205ENST00000553609 TRBV20OR9-2A0A075B6H5 130 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 H7C423 109 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 NCR2O95944 276 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 CCL20P78556 96 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 RNASEKQ6P5S7 137 aaKnown RBP8.67□□□□□ -1.02
NEDD1-205ENST00000553609 C9orf62Q8N4C0 152 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 OR5A1Q8NGJ0 315 aa8.67□□□□□ -1.02
NEDD1-205ENST00000553609 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
NEDD1-205ENST00000553609 LINC00959A0A1B0GUT2 108 aa8.66□□□□□ -1.02
NEDD1-205ENST00000553609 RAB19A4D1S5 217 aa8.66□□□□□ -1.02
NEDD1-205ENST00000553609 FAM231BA6NCW3 169 aa8.66□□□□□ -1.02
NEDD1-205ENST00000553609 CCL25O15444 150 aa8.66□□□□□ -1.02
NEDD1-205ENST00000553609 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
NEDD1-205ENST00000553609 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
NEDD1-205ENST00000553609 IFNA1P01562 189 aa8.65□□□□□ -1.02
NEDD1-205ENST00000553609 APCSP02743 223 aa8.65□□□□□ -1.02
NEDD1-205ENST00000553609 ZNF25P17030 456 aaPredicted RBP8.65□□□□□ -1.02
NEDD1-205ENST00000553609 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
NEDD1-205ENST00000553609 SMIM12Q96EX1 92 aa8.65□□□□□ -1.02
NEDD1-205ENST00000553609 XKRY2A2RUG3 117 aa8.64□□□□□ -1.03
NEDD1-205ENST00000553609 SMLR1H3BR10 107 aa8.64□□□□□ -1.03
NEDD1-205ENST00000553609 ZNF345Q14585 488 aa8.64□□□□□ -1.03
NEDD1-205ENST00000553609 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
NEDD1-205ENST00000553609 MANBALQ9NQG1 85 aa8.64□□□□□ -1.03
NEDD1-205ENST00000553609 GNG13Q9P2W3 67 aa8.64□□□□□ -1.03
NEDD1-205ENST00000553609 FAT4Q6V0I7 4981 aa8.64□□□□□ -1.03
NEDD1-205ENST00000553609 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
NEDD1-205ENST00000553609 ESDP10768 282 aa8.63□□□□□ -1.03
NEDD1-205ENST00000553609 GNG4P50150 75 aa8.63□□□□□ -1.03
NEDD1-205ENST00000553609 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
NEDD1-205ENST00000553609 TWIST1Q15672 202 aa8.63□□□□□ -1.03
NEDD1-205ENST00000553609 ZNF664Q8N3J9 261 aa8.63□□□□□ -1.03
NEDD1-205ENST00000553609 TRAV1-1A0A0B4J248 108 aa8.62□□□□□ -1.03
NEDD1-205ENST00000553609 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
NEDD1-205ENST00000553609 CAMPP49913 170 aa8.62□□□□□ -1.03
NEDD1-205ENST00000553609 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
NEDD1-205ENST00000553609 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
NEDD1-205ENST00000553609 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
NEDD1-205ENST00000553609 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms