RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 TIRAPP58753 221 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 SPINK13Q1W4C9 94 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 BEAN1Q3B7T3 259 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 DEFB121Q5J5C9 76 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 MUSTN1Q8IVN3 82 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 TMEM61Q8N0U2 210 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 Q8N2B8 174 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 FAM104AQ969W3 186 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 GEMIN7Q9H840 131 aaKnown RBP3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 VPREB3Q9UKI3 123 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 UBE2D4Q9Y2X8 147 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 DOPEY2Q9Y3R5 2298 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 NBASA2RRP1 2371 aa3.84□□□□□ -1.79
TMEM55B-204ENST00000553602 ABCA2Q9BZC7 2435 aa3.84□□□□□ -1.8
TMEM55B-204ENST00000553602 IGHV4-30-2A0A087WSY4 118 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 A0A096LNT2 108 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 IGLV5-39A0A0G2JS06 123 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 H3BMM0 161 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 LST1O00453 97 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 TRIAP1O43715 76 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 ATP5J2P56134 94 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 UBE2WQ96B02 151 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 CHCHD7Q9BUK0 85 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 C1orf43Q9BWL3 253 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 CSDC2Q9Y534 153 aaKnown RBP3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 TNFRSF18Q9Y5U5 241 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 ICOSQ9Y6W8 199 aa3.83□□□□□ -1.8
TMEM55B-204ENST00000553602 IGSF10Q6WRI0 2623 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 IGKV3-7A0A075B6H7 116 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 TRAV12-2A0A075B6T6 113 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 TRBV10-1A0A0K0K1A3 114 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 HOXD3P31249 432 aaPredicted RBP3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 DEFB112Q30KQ8 113 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 TMEM95Q3KNT9 176 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 TEX29Q8N6K0 151 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 LINC01356Q8N9X3 169 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 C11orf72Q8NBR9 251 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 IL17DQ8TAD2 202 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 MGAQ8IWI9 3026 aa3.82□□□□□ -1.8
TMEM55B-204ENST00000553602 ADGRG4Q8IZF6 3080 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 TRAV26-1A0A087WT03 109 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 TRAV8-4A0A0B4J246 113 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 TRAV25A0A0B4J276 109 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 RS1O15537 224 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 SNCGO76070 127 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 INSP01308 110 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 IGHV4-59P01825 116 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 ACYP1P07311 99 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 RBMY1A1P0DJD3 496 aaKnown RBP3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 RBMY1CP0DJD4 496 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 EDN2P20800 178 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 GNLYP22749 145 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 SYNJ2BPP57105 145 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 HERVK_113P63121 156 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 RBMY1FQ15415 496 aaKnown RBP3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 Q1RN00 199 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 NTN5Q8WTR8 489 aaPredicted RBP3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 OPRPNQ99935 248 aaPredicted RBP3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 PEMTQ9UBM1 199 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 LAMA5O15230 3695 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 HIVEP3Q5T1R4 2406 aa3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 HRNRQ86YZ3 2850 aaPredicted RBP3.81□□□□□ -1.8
TMEM55B-204ENST00000553602 HELZ2Q9BYK8 2649 aaKnown RBP3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 BOD1L1Q8NFC6 3051 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 PTPN13Q12923 2485 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 TRBV7-7A0A0K0K1E9 115 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 A0A1W2PRX2 142 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 B5MCH6 92 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 H7C423 109 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 TRACP01848 142 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 HERV-K104P63124 156 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 GAGE2BQ13066 116 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 CIRBPQ14011 172 aaKnown RBP3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 GAGE2EQ4V326 116 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 FAM222AQ5U5X8 452 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 SFTA2Q6UW10 78 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 Q6YL49 198 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 C4orf3Q8WVX3 66 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 DUX3Q96PT4 197 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 ANAPC13Q9BS18 74 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 IMUPQ9GZP8 106 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 GAGE2DQ9UEU5 116 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 ZFHX4Q86UP3 3567 aa3.8□□□□□ -1.8
TMEM55B-204ENST00000553602 TRAV8-3A0A0A6YYJ7 113 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 RBMY1BA6NDE4 496 aaKnown RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 RBMY1EA6NEQ0 496 aaKnown RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 COX7A2LO14548 114 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 RBMY1DP0C7P1 496 aaKnown RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 NDUFV3P56181 108 aaKnown RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 DEFB131AP59861 70 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 GAGE5Q13069 117 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 GAGE6Q13070 117 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 DAZ2Q13117 558 aaKnown RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 LY6DQ14210 128 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 ADAMTSL4-AS1Q5T5F5 129 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms