RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 COTL1Q14019 142 aa12.34□□□□□ -0.43
PSEN1-206ENST00000553447 JOSD1Q15040 202 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-206ENST00000553447 PYY3Q5JQD4 70 aa12.34□□□□□ -0.43
PSEN1-206ENST00000553447 C2orf66Q6UXQ4 117 aa12.34□□□□□ -0.43
PSEN1-206ENST00000553447 PAX4O43316 350 aa12.33□□□□□ -0.44
PSEN1-206ENST00000553447 SMIM6P0DI80 62 aa12.33□□□□□ -0.44
PSEN1-206ENST00000553447 GYPEP15421 78 aa12.33□□□□□ -0.44
PSEN1-206ENST00000553447 HTN3P15516 51 aa12.33□□□□□ -0.44
PSEN1-206ENST00000553447 IFI27L1Q96BM0 104 aa12.33□□□□□ -0.44
PSEN1-206ENST00000553447 MAP1LC3CQ9BXW4 147 aa12.33□□□□□ -0.44
PSEN1-206ENST00000553447 CYSLTR1Q9Y271 337 aa12.33□□□□□ -0.44
PSEN1-206ENST00000553447 LINC01549A6NIU2 74 aa12.32□□□□□ -0.44
PSEN1-206ENST00000553447 C11orf45Q8TAV5 145 aa12.32□□□□□ -0.44
PSEN1-206ENST00000553447 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
PSEN1-206ENST00000553447 SYS1-DBNDD2H3BUS1 97 aa12.31□□□□□ -0.44
PSEN1-206ENST00000553447 ATP5LO75964 103 aa12.31□□□□□ -0.44
PSEN1-206ENST00000553447 C20orf203Q8NBC4 194 aa12.31□□□□□ -0.44
PSEN1-206ENST00000553447 CHCHD7Q9BUK0 85 aa12.31□□□□□ -0.44
PSEN1-206ENST00000553447 DNHD1Q96M86 4753 aa12.3□□□□□ -0.44
PSEN1-206ENST00000553447 TRAV26-1A0A087WT03 109 aa12.3□□□□□ -0.44
PSEN1-206ENST00000553447 A0A0J9YY99 117 aa12.3□□□□□ -0.44
PSEN1-206ENST00000553447 SCGB1D1O95968 90 aa12.3□□□□□ -0.44
PSEN1-206ENST00000553447 NANOS2P60321 138 aaKnown RBP12.3□□□□□ -0.44
PSEN1-206ENST00000553447 RPL39P62891 51 aaKnown RBP12.3□□□□□ -0.44
PSEN1-206ENST00000553447 Q6ZTC4 211 aa12.3□□□□□ -0.44
PSEN1-206ENST00000553447 Q8N976 141 aa12.3□□□□□ -0.44
PSEN1-206ENST00000553447 SCGB3A1Q96QR1 104 aa12.3□□□□□ -0.44
PSEN1-206ENST00000553447 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
PSEN1-206ENST00000553447 GTSF1LQ9H1H1 148 aa12.29□□□□□ -0.44
PSEN1-206ENST00000553447 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
PSEN1-206ENST00000553447 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.28□□□□□ -0.44
PSEN1-206ENST00000553447 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
PSEN1-206ENST00000553447 ERASQ7Z444 233 aa12.28□□□□□ -0.44
PSEN1-206ENST00000553447 SPATA12Q7Z6I5 190 aa12.28□□□□□ -0.44
PSEN1-206ENST00000553447 LINC00518Q8N0U6 118 aa12.28□□□□□ -0.44
PSEN1-206ENST00000553447 IGIPA6NJ69 53 aa12.27□□□□□ -0.45
PSEN1-206ENST00000553447 H0Y8G0 127 aa12.27□□□□□ -0.45
PSEN1-206ENST00000553447 DEFA6Q01524 100 aa12.27□□□□□ -0.45
PSEN1-206ENST00000553447 ATP6V0E2Q8NHE4 81 aa12.27□□□□□ -0.45
PSEN1-206ENST00000553447 TMEM97Q5BJF2 176 aa12.26□□□□□ -0.45
PSEN1-206ENST00000553447 TIMM17AQ99595 171 aa12.26□□□□□ -0.45
PSEN1-206ENST00000553447 C12orf57Q99622 126 aa12.26□□□□□ -0.45
PSEN1-206ENST00000553447 TENM3Q9P273 2699 aa12.26□□□□□ -0.45
PSEN1-206ENST00000553447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-206ENST00000553447 C20orf202A1L168 122 aa12.25□□□□□ -0.45
PSEN1-206ENST00000553447 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-206ENST00000553447 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
PSEN1-206ENST00000553447 Q6ZN92 141 aa12.25□□□□□ -0.45
PSEN1-206ENST00000553447 TMEM141Q96I45 108 aa12.25□□□□□ -0.45
PSEN1-206ENST00000553447 PRSS1P07477 247 aa12.24□□□□□ -0.45
PSEN1-206ENST00000553447 NHLRC4P0CG21 123 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-206ENST00000553447 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
PSEN1-206ENST00000553447 LINC01545Q5VT33 79 aa12.24□□□□□ -0.45
PSEN1-206ENST00000553447 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
PSEN1-206ENST00000553447 DNAH9Q9NYC9 4486 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 TRBV25-1A0A075B6N4 114 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 DEFB131BA0A096LNP1 70 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 H3BNG1 76 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 BAALCQ8WXS3 180 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 TMEM243Q9BU79 118 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 SPANXA1Q9NS26 97 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 PYGO1Q9Y3Y4 419 aa12.23□□□□□ -0.45
PSEN1-206ENST00000553447 A0A096LPF7 62 aa12.22□□□□□ -0.45
PSEN1-206ENST00000553447 SH2D6Q7Z4S9 175 aa12.22□□□□□ -0.45
PSEN1-206ENST00000553447 UBE2D4Q9Y2X8 147 aa12.22□□□□□ -0.45
PSEN1-206ENST00000553447 TRAV10A0A0B4J240 114 aa12.21□□□□□ -0.45
PSEN1-206ENST00000553447 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.45
PSEN1-206ENST00000553447 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.45
PSEN1-206ENST00000553447 IGLV4-3A0A075B6K6 122 aa12.2□□□□□ -0.46
PSEN1-206ENST00000553447 H7C423 109 aa12.2□□□□□ -0.46
PSEN1-206ENST00000553447 NPSP0C0P6 89 aa12.2□□□□□ -0.46
PSEN1-206ENST00000553447 ODF1Q14990 250 aa12.2□□□□□ -0.46
PSEN1-206ENST00000553447 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
PSEN1-206ENST00000553447 OPRPNQ99935 248 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-206ENST00000553447 PMCHL2Q9BQD1 86 aa12.2□□□□□ -0.46
PSEN1-206ENST00000553447 A0A087WX48 190 aa12.19□□□□□ -0.46
PSEN1-206ENST00000553447 UBE2L6O14933 153 aa12.19□□□□□ -0.46
PSEN1-206ENST00000553447 CEMP1Q6PRD7 247 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-206ENST00000553447 FGF6P10767 208 aa12.18□□□□□ -0.46
PSEN1-206ENST00000553447 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
PSEN1-206ENST00000553447 PMVKQ15126 192 aa12.18□□□□□ -0.46
PSEN1-206ENST00000553447 MRPL52Q86TS9 123 aaKnown RBP12.18□□□□□ -0.46
PSEN1-206ENST00000553447 ATOH7Q8N100 152 aa12.18□□□□□ -0.46
PSEN1-206ENST00000553447 FAM104AQ969W3 186 aa12.18□□□□□ -0.46
PSEN1-206ENST00000553447 PRSS29PA6NIE9 313 aa12.17□□□□□ -0.46
PSEN1-206ENST00000553447 PAPPA-AS1Q5QFB9 102 aa12.17□□□□□ -0.46
PSEN1-206ENST00000553447 ZC2HC1BQ5TFG8 222 aa12.17□□□□□ -0.46
PSEN1-206ENST00000553447 CHCHD5Q9BSY4 110 aa12.17□□□□□ -0.46
PSEN1-206ENST00000553447 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
PSEN1-206ENST00000553447 S100A12P80511 92 aa12.16□□□□□ -0.46
PSEN1-206ENST00000553447 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
PSEN1-206ENST00000553447 GAGE6Q13070 117 aa12.16□□□□□ -0.46
PSEN1-206ENST00000553447 DGAT2L7PQ6IED9 249 aa12.16□□□□□ -0.46
PSEN1-206ENST00000553447 CST9LQ9H4G1 147 aa12.16□□□□□ -0.46
PSEN1-206ENST00000553447 MRPL35Q9NZE8 188 aaKnown RBP12.16□□□□□ -0.46
PSEN1-206ENST00000553447 CSDC2Q9Y534 153 aaKnown RBP12.16□□□□□ -0.46
PSEN1-206ENST00000553447 F8VRH5 84 aa12.15□□□□□ -0.46
PSEN1-206ENST00000553447 AMMECR1LQ6DCA0 310 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms