RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
SHMT2-204ENST00000553324 PRR34Q9NV39 138 aa10.16□□□□□ -0.78
SHMT2-204ENST00000553324 TRBV6-5A0A0K0K1A5 114 aa10.15□□□□□ -0.78
SHMT2-204ENST00000553324 A0A1B0GW15 77 aa10.15□□□□□ -0.78
SHMT2-204ENST00000553324 SMIM27A0A1W2PRY6 76 aa10.15□□□□□ -0.78
SHMT2-204ENST00000553324 PPP1R17O96001 155 aa10.15□□□□□ -0.78
SHMT2-204ENST00000553324 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
SHMT2-204ENST00000553324 LINC00269Q8N2A0 174 aa10.15□□□□□ -0.78
SHMT2-204ENST00000553324 MAPKAPK5-AS1Q8N8E1 139 aa10.15□□□□□ -0.78
SHMT2-204ENST00000553324 MRAP2Q96G30 205 aa10.15□□□□□ -0.78
SHMT2-204ENST00000553324 APOBP04114 4563 aaKnown RBP10.15□□□□□ -0.78
SHMT2-204ENST00000553324 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
SHMT2-204ENST00000553324 H7C423 109 aa10.14□□□□□ -0.79
SHMT2-204ENST00000553324 I3L3M4 83 aa10.14□□□□□ -0.79
SHMT2-204ENST00000553324 RAB4AP20338 218 aa10.14□□□□□ -0.79
SHMT2-204ENST00000553324 PMCHP20382 165 aa10.14□□□□□ -0.79
SHMT2-204ENST00000553324 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
SHMT2-204ENST00000553324 RPL39LQ96EH5 51 aaKnown RBP10.14□□□□□ -0.79
SHMT2-204ENST00000553324 ST20Q9HBF5 79 aa10.14□□□□□ -0.79
SHMT2-204ENST00000553324 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
SHMT2-204ENST00000553324 PPP1R2P9O14990 202 aa10.13□□□□□ -0.79
SHMT2-204ENST00000553324 LECT2O14960 151 aa10.12□□□□□ -0.79
SHMT2-204ENST00000553324 S100A8P05109 93 aa10.12□□□□□ -0.79
SHMT2-204ENST00000553324 KRTAP10-1P60331 282 aa10.12□□□□□ -0.79
SHMT2-204ENST00000553324 REG3AQ06141 175 aa10.12□□□□□ -0.79
SHMT2-204ENST00000553324 PNRC1Q12796 327 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-204ENST00000553324 CLLU1Q5K131 121 aa10.12□□□□□ -0.79
SHMT2-204ENST00000553324 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
SHMT2-204ENST00000553324 RNF185Q96GF1 192 aa10.12□□□□□ -0.79
SHMT2-204ENST00000553324 APCSP02743 223 aa10.11□□□□□ -0.79
SHMT2-204ENST00000553324 WFDC2Q14508 124 aa10.11□□□□□ -0.79
SHMT2-204ENST00000553324 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
SHMT2-204ENST00000553324 LINC00862A6NCI5 91 aa10.1□□□□□ -0.79
SHMT2-204ENST00000553324 F8W036 122 aa10.1□□□□□ -0.79
SHMT2-204ENST00000553324 AMMECR1LQ6DCA0 310 aa10.1□□□□□ -0.79
SHMT2-204ENST00000553324 DEFB104AQ8WTQ1 72 aa10.1□□□□□ -0.79
SHMT2-204ENST00000553324 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
SHMT2-204ENST00000553324 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
SHMT2-204ENST00000553324 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-204ENST00000553324 TRBV27A0A0K0K1C4 114 aa10.09□□□□□ -0.79
SHMT2-204ENST00000553324 VCYO14598 125 aa10.09□□□□□ -0.79
SHMT2-204ENST00000553324 CAMPP49913 170 aa10.09□□□□□ -0.79
SHMT2-204ENST00000553324 POLR2KP53803 58 aaKnown RBP10.09□□□□□ -0.79
SHMT2-204ENST00000553324 FAM104BQ5XKR9 115 aa10.09□□□□□ -0.79
SHMT2-204ENST00000553324 Q8N1X5 172 aa10.09□□□□□ -0.79
SHMT2-204ENST00000553324 ZNF25P17030 456 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-204ENST00000553324 XGP55808 180 aa10.08□□□□□ -0.8
SHMT2-204ENST00000553324 CLPSL2Q6UWE3 100 aa10.08□□□□□ -0.8
SHMT2-204ENST00000553324 ANAPC16Q96DE5 110 aa10.08□□□□□ -0.8
SHMT2-204ENST00000553324 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 HLA-DQA1P01909 254 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 HBBP68871 147 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 RNASEKQ6P5S7 137 aaKnown RBP10.07□□□□□ -0.8
SHMT2-204ENST00000553324 UQCC3Q6UW78 93 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 ATP5L2Q7Z4Y8 100 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 TMEM101Q96IK0 257 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 BTF3L4Q96K17 158 aa10.07□□□□□ -0.8
SHMT2-204ENST00000553324 FGF6P10767 208 aa10.06□□□□□ -0.8
SHMT2-204ENST00000553324 ESDP10768 282 aa10.06□□□□□ -0.8
SHMT2-204ENST00000553324 CKS2P33552 79 aa10.06□□□□□ -0.8
SHMT2-204ENST00000553324 RPS10P46783 165 aaKnown RBP10.06□□□□□ -0.8
SHMT2-204ENST00000553324 SUMO2P61956 95 aaKnown RBP10.06□□□□□ -0.8
SHMT2-204ENST00000553324 MRPL51Q4U2R6 128 aaKnown RBP10.06□□□□□ -0.8
SHMT2-204ENST00000553324 CLRN3Q8NCR9 226 aa10.06□□□□□ -0.8
SHMT2-204ENST00000553324 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
SHMT2-204ENST00000553324 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-204ENST00000553324 IGKV2-29A2NJV5 120 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-204ENST00000553324 USP17L23D6RBM5 183 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 TCAPO15273 167 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 TSHBP01222 138 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 FCER1GP30273 86 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 SMAGPQ0VAQ4 97 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 DGAT2L7PQ6IED9 249 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 MRPL54Q6P161 138 aaKnown RBP10.05□□□□□ -0.8
SHMT2-204ENST00000553324 KRTAP26-1Q6PEX3 210 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 NRACQ8N912 160 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 C20orf78Q9BR46 151 aa10.05□□□□□ -0.8
SHMT2-204ENST00000553324 IGLV10-54A0A075B6I4 117 aa10.04□□□□□ -0.8
SHMT2-204ENST00000553324 TRBV24-1A0A075B6N3 115 aa10.04□□□□□ -0.8
SHMT2-204ENST00000553324 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
SHMT2-204ENST00000553324 SMKR1H3BMG3 65 aa10.04□□□□□ -0.8
SHMT2-204ENST00000553324 PPBPP02775 128 aa10.04□□□□□ -0.8
SHMT2-204ENST00000553324 TMEM242Q9NWH2 141 aa10.04□□□□□ -0.8
SHMT2-204ENST00000553324 C7orf77A4D0Y5 90 aa10.03□□□□□ -0.8
SHMT2-204ENST00000553324 IFITM2Q01629 132 aa10.03□□□□□ -0.8
SHMT2-204ENST00000553324 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
SHMT2-204ENST00000553324 EPM2AB3EWF7 344 aa10.02□□□□□ -0.81
SHMT2-204ENST00000553324 PHOX2AO14813 284 aa10.02□□□□□ -0.81
SHMT2-204ENST00000553324 RPL32P62910 135 aaKnown RBP10.02□□□□□ -0.81
SHMT2-204ENST00000553324 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
SHMT2-204ENST00000553324 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
SHMT2-204ENST00000553324 OR5A1Q8NGJ0 315 aa10.02□□□□□ -0.81
SHMT2-204ENST00000553324 TMEM18Q96B42 140 aa10.02□□□□□ -0.81
SHMT2-204ENST00000553324 PCLOQ9Y6V0 5065 aa10.02□□□□□ -0.81
SHMT2-204ENST00000553324 IGKV3OR2-268A0A0C4DH90 116 aa10□□□□□ -0.81
SHMT2-204ENST00000553324 TMEM218A2RU14 115 aa10□□□□□ -0.81
SHMT2-204ENST00000553324 TNFRSF6BO95407 300 aa10□□□□□ -0.81
SHMT2-204ENST00000553324 PRSS1P07477 247 aa10□□□□□ -0.81
SHMT2-204ENST00000553324 Q6ZSA8 131 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms