RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 DAZ4Q86SG3 579 aaKnown RBP3.24□□□□□ -1.89
CKAP4-203ENST00000553039 BPIFA4PQ86YQ2 179 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 FAM167A-AS1Q96KT0 104 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 LINC00477Q96M19 166 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 TCEAL7Q9BRU2 100 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 SLC50A1Q9BRV3 221 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 SHANK2-AS3Q9BTD1 123 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 DAZ3Q9NR90 486 aaKnown RBP3.24□□□□□ -1.89
CKAP4-203ENST00000553039 TMEM14CQ9P0S9 112 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 KIF25-AS1Q9Y6Z4 181 aa3.24□□□□□ -1.89
CKAP4-203ENST00000553039 A0A087WYN8 130 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 TRAV4A0A0B4J268 109 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 A0A1B0GUV1 79 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 B4DEV8 164 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 H3BQ15 152 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 PYYP10082 97 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 Q6ZRP5 223 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 FXYD5Q96DB9 178 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 TVP23CQ96ET8 276 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 C9orf85Q96MD7 179 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 SMIM7Q9BQ49 75 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 PARLQ9H300 379 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 NAT8Q9UHE5 227 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 PRELID1Q9Y255 219 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 FSIP2Q5CZC0 6907 aa3.23□□□□□ -1.89
CKAP4-203ENST00000553039 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.22□□□□□ -1.89
CKAP4-203ENST00000553039 PGPA6NDG6 321 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 SCO1O75880 301 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 NBEAP1P0C6P0 100 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 IGLC2P0DOY2 106 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 HIST1H1EP10412 219 aaKnown RBP3.22□□□□□ -1.89
CKAP4-203ENST00000553039 AKR1C3P42330 323 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 BTN1A1Q13410 526 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 PDE6HQ13956 83 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 CIRBPQ14011 172 aaKnown RBP3.22□□□□□ -1.89
CKAP4-203ENST00000553039 ADIRFQ15847 76 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 TMEM241Q24JQ0 296 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 SMIM29Q86T20 159 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 C5orf17Q8NAS9 161 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 Q8TAT8 98 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 CMTM2Q8TAZ6 248 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 HIST1H2BAQ96A08 127 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 UBE2WQ96B02 151 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 SDF2L1Q9HCN8 221 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 RPS10P5Q9NQ39 176 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 ZNF331Q9NQX6 463 aaPredicted RBP3.22□□□□□ -1.89
CKAP4-203ENST00000553039 DNAH8Q96JB1 4490 aa3.22□□□□□ -1.89
CKAP4-203ENST00000553039 TRBV19A0A075B6N1 114 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 IGHV3-64A0A075B6Q5 118 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 A0A087WX48 190 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 LOC100131303A0A0U1RQF7 123 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 TRBV6-4A0A1B0GX49 114 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 C7orf77A4D0Y5 90 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 KLLNB2CW77 178 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 PEX7O00628 323 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 ZNF253O75346 499 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 MT-ND4LP03901 98 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 SLPIP03973 132 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 RPL35P42766 123 aaKnown RBP3.21□□□□□ -1.9
CKAP4-203ENST00000553039 GNG4P50150 75 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 UBE2G1P62253 170 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 RANP62826 216 aaKnown RBP3.21□□□□□ -1.9
CKAP4-203ENST00000553039 CACNG7P62955 275 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 PRR3P79522 188 aaKnown RBP3.21□□□□□ -1.9
CKAP4-203ENST00000553039 RHOHQ15669 191 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.21□□□□□ -1.9
CKAP4-203ENST00000553039 DERL1Q9BUN8 251 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 OTORQ9NRC9 128 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 SMCO4Q9NRQ5 59 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 PLAC8Q9NZF1 115 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 KLK12Q9UKR0 248 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 TP53TG3Q9ULZ0 132 aa3.21□□□□□ -1.9
CKAP4-203ENST00000553039 M0R2P5 195 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 PPP1R2P9O14990 202 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 MRPS12O15235 138 aaKnown RBP3.2□□□□□ -1.9
CKAP4-203ENST00000553039 TSPAN13O95857 204 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 TCRAP04437 139 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 CSN1S1P47710 185 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 RPL23P62829 140 aaKnown RBP3.2□□□□□ -1.9
CKAP4-203ENST00000553039 GNG5P63218 68 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 TMEM183BQ1AE95 376 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 CENPWQ5EE01 88 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 LINC01551Q86U37 167 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 NIT1Q86X76 327 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 CBLN2Q8IUK8 224 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 EXOC3-AS1Q8N2X6 119 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 TMEM75Q8N9X5 138 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 ISOC2Q96AB3 205 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 SMIM12Q96EX1 92 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 FMC1Q96HJ9 113 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 CHCHD7Q9BUK0 85 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 EPDR1Q9UM22 224 aa3.2□□□□□ -1.9
CKAP4-203ENST00000553039 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
CKAP4-203ENST00000553039 IGHV3-16A0A0C4DH30 117 aa3.19□□□□□ -1.9
CKAP4-203ENST00000553039 SLC17A3O00476 420 aa3.19□□□□□ -1.9
CKAP4-203ENST00000553039 CRISP2P16562 243 aa3.19□□□□□ -1.9
CKAP4-203ENST00000553039 S100PP25815 95 aa3.19□□□□□ -1.9
CKAP4-203ENST00000553039 ADAMTSL4-AS1Q5T5F5 129 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms