RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TRBV6-8A0A0A6YYG3 113 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 CRPP02741 224 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 LINC00694P0DN24 101 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 LAGE3Q14657 143 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 TMEM241Q24JQ0 296 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 RASL11AQ6T310 242 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 FAM231DQ6ZW35 169 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 DAZ4Q86SG3 579 aaKnown RBP3.98□□□□□ -1.77
CCDC65-204ENST00000552188 NIT2Q9NQR4 276 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 DAZ3Q9NR90 486 aaKnown RBP3.98□□□□□ -1.77
CCDC65-204ENST00000552188 KLK12Q9UKR0 248 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 COX11Q9Y6N1 276 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 PKD1P98161 4303 aa3.98□□□□□ -1.77
CCDC65-204ENST00000552188 IGKV2D-24A0A075B6R9 120 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 A0A087WTM6 91 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 IGHV1-24A0A0C4DH33 117 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 PCP4L1A6NKN8 68 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 UBE2L6O14933 153 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 CTRLP40313 264 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 Q0VG73 95 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 GAGE6Q13070 117 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 RIGQ13278 110 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 Q6ZRN7 208 aaPredicted RBP3.97□□□□□ -1.77
CCDC65-204ENST00000552188 ERASQ7Z444 233 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 LINC01551Q86U37 167 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 NIT1Q86X76 327 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 UBE2WQ96B02 151 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 CHCHD7Q9BUK0 85 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 SMDT1Q9H4I9 107 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 OSTCQ9NRP0 149 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 NAT8Q9UHE5 227 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 KIF25-AS1Q9Y6Z4 181 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 HECTD4Q9Y4D8 3996 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 BIRC6Q9NR09 4857 aa3.97□□□□□ -1.77
CCDC65-204ENST00000552188 A0A1B0GUT8 65 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 M0QY20 66 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 ATP6V1G1O75348 118 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 ANGP03950 147 aaKnown RBP3.96□□□□□ -1.78
CCDC65-204ENST00000552188 SEC61GP60059 68 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 TSKUQ8WUA8 353 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 GTSF1Q8WW33 167 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 GFRA4Q9GZZ7 299 aa3.96□□□□□ -1.78
CCDC65-204ENST00000552188 IGLV5-52A0A0A0MRZ9 124 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 FAM231BA6NCW3 169 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 HIGD1CA8MV81 97 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 B5MCH6 92 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 PMCHP20382 165 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 AMTP48728 403 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 KRTAP10-2P60368 255 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 RPL23P62829 140 aaKnown RBP3.95□□□□□ -1.78
CCDC65-204ENST00000552188 ATRAIDQ6UW56 229 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 FRZBQ92765 325 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 ISOC2Q96AB3 205 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 TMEM243Q9BU79 118 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 CNFNQ9BYD5 112 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 NAT8BQ9UHF3 227 aa3.95□□□□□ -1.78
CCDC65-204ENST00000552188 TRAV26-2A0A0B4J265 109 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 LECT2O14960 151 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 FUSP35637 526 aaKnown RBP eCLIP3.94□□□□□ -1.78
CCDC65-204ENST00000552188 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
CCDC65-204ENST00000552188 IQCJQ1A5X6 159 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 MPV17L2Q567V2 206 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 AMMECR1LQ6DCA0 310 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 NTM-AS1Q6ZSK4 140 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 Q8N814 137 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 Q8N976 141 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 GATD1Q8NB37 220 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 DEFB104AQ8WTQ1 72 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 NTN5Q8WTR8 489 aaPredicted RBP3.94□□□□□ -1.78
CCDC65-204ENST00000552188 BAALCQ8WXS3 180 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 TMEM191AQ9H0A3 160 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 ST20Q9HBF5 79 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 V9GYV3 84 aa3.94□□□□□ -1.78
CCDC65-204ENST00000552188 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.93□□□□□ -1.78
CCDC65-204ENST00000552188 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 C9JQL5 133 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 I3L3M4 83 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 PPP1R2P9O14990 202 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 CDK2AP2O75956 126 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 NCR2O95944 276 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 HLA-DQA1P01909 254 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 APCSP02743 223 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 S100A8P05109 93 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 RBX1P62877 108 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 MIAQ16674 131 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 C14orf177Q52M58 125 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 RNASEKQ6P5S7 137 aaKnown RBP3.93□□□□□ -1.78
CCDC65-204ENST00000552188 CLPSL2Q6UWE3 100 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 LINC00269Q8N2A0 174 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 MAPKAPK5-AS1Q8N8E1 139 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 NUP35Q8NFH5 326 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 RPL39LQ96EH5 51 aaKnown RBP3.93□□□□□ -1.78
CCDC65-204ENST00000552188 BTF3L4Q96K17 158 aa3.93□□□□□ -1.78
CCDC65-204ENST00000552188 IGLV10-54A0A075B6I4 117 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms