RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 GAGE12FP0CL80 117 aa8.21□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE12GP0CL81 117 aa8.21□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE12IP0CL82 117 aa8.21□□□□□ -1.1
RAB5C-208ENST00000551338 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
RAB5C-208ENST00000551338 Q6ZVH6 145 aa8.21□□□□□ -1.1
RAB5C-208ENST00000551338 NFE4Q86UQ8 179 aa8.21□□□□□ -1.1
RAB5C-208ENST00000551338 C2CD3Q4AC94 2353 aa8.21□□□□□ -1.1
RAB5C-208ENST00000551338 TRBV25-1A0A075B6N4 114 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 TRAV8-6A0A0B4J262 113 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 COTL1Q14019 142 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 OR11H2Q8NH07 326 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 ZNRF2Q8NHG8 242 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 ORAOV1Q8WV07 137 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 AMELXQ99217 191 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 PRADC1Q9BSG0 188 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 CHAC1Q9BUX1 264 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 X6R8D5 127 aa8.2□□□□□ -1.1
RAB5C-208ENST00000551338 SETXQ7Z333 2677 aaKnown RBP8.19□□□□□ -1.1
RAB5C-208ENST00000551338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
RAB5C-208ENST00000551338 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
RAB5C-208ENST00000551338 TAX1BP3O14907 124 aa8.19□□□□□ -1.1
RAB5C-208ENST00000551338 NPSP0C0P6 89 aa8.19□□□□□ -1.1
RAB5C-208ENST00000551338 LINC00612Q8N6U2 182 aa8.19□□□□□ -1.1
RAB5C-208ENST00000551338 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
RAB5C-208ENST00000551338 ZMAT5Q9UDW3 170 aaKnown RBP8.19□□□□□ -1.1
RAB5C-208ENST00000551338 UBE2D4Q9Y2X8 147 aa8.19□□□□□ -1.1
RAB5C-208ENST00000551338 TRBV7-3A0A075B6L6 115 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 WIPF1O43516 503 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 CIDEAO60543 219 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 CRYBA4P53673 196 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 UBE2D3P61077 147 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 HERVK_113P61574 105 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 UBE2D2P62837 147 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 SEC11AP67812 179 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 RPL36AP83881 106 aaKnown RBP8.18□□□□□ -1.1
RAB5C-208ENST00000551338 CEMP1Q6PRD7 247 aaPredicted RBP8.18□□□□□ -1.1
RAB5C-208ENST00000551338 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 WFDC9Q8NEX5 89 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 RPL36ALQ969Q0 106 aaKnown RBP8.18□□□□□ -1.1
RAB5C-208ENST00000551338 COX11Q9Y6N1 276 aa8.18□□□□□ -1.1
RAB5C-208ENST00000551338 TRGV2A0A075B6R0 118 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 A0A0J9YXV3 536 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE12JA6NER3 117 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE1Q13065 139 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE4Q13068 117 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE5Q13069 117 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 KRTAP24-1Q3LI83 254 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE13Q4V321 117 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 Q6ZUT4 128 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
RAB5C-208ENST00000551338 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 TSPEAR-AS2P59090 65 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 FHL2Q14192 279 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
RAB5C-208ENST00000551338 TMEM170BQ5T4T1 132 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 NTM-AS1Q6ZSK4 140 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 SBSPONQ8IVN8 264 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 KIR2DL5BQ8NHK3 375 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 TIMM21Q9BVV7 248 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 VCX2Q9H322 139 aa8.16□□□□□ -1.1
RAB5C-208ENST00000551338 TMEM223A0PJW6 202 aa8.15□□□□□ -1.1
RAB5C-208ENST00000551338 SMIM9A6NGZ8 99 aa8.15□□□□□ -1.1
RAB5C-208ENST00000551338 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
RAB5C-208ENST00000551338 FXYD2P54710 66 aa8.15□□□□□ -1.1
RAB5C-208ENST00000551338 MRPS36P82909 103 aaKnown RBP8.15□□□□□ -1.1
RAB5C-208ENST00000551338 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
RAB5C-208ENST00000551338 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
RAB5C-208ENST00000551338 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
RAB5C-208ENST00000551338 TRGV4A0A0C4DH28 118 aa8.14□□□□□ -1.11
RAB5C-208ENST00000551338 ZNF815PA8K554 130 aa8.14□□□□□ -1.11
RAB5C-208ENST00000551338 CYSRT1A8MQ03 144 aa8.14□□□□□ -1.11
RAB5C-208ENST00000551338 TAL2Q16559 108 aa8.14□□□□□ -1.11
RAB5C-208ENST00000551338 OTOGQ6ZRI0 2925 aa8.14□□□□□ -1.11
RAB5C-208ENST00000551338 NSD1Q96L73 2696 aaPredicted RBP8.14□□□□□ -1.11
RAB5C-208ENST00000551338 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 A6NDN8 102 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 K7EP13 123 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 LEPROTO15243 131 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 GCSHP23434 173 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 APOC4P55056 127 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 CEND1Q8N111 149 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 TM2D2Q9BX73 214 aa8.13□□□□□ -1.11
RAB5C-208ENST00000551338 H3BRM9 83 aa8.12□□□□□ -1.11
RAB5C-208ENST00000551338 DEFB135Q30KP9 77 aa8.12□□□□□ -1.11
RAB5C-208ENST00000551338 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
RAB5C-208ENST00000551338 F8P00451 2351 aa8.11□□□□□ -1.11
RAB5C-208ENST00000551338 NF1P21359 2839 aa8.11□□□□□ -1.11
RAB5C-208ENST00000551338 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
RAB5C-208ENST00000551338 J3QQQ9 107 aa8.11□□□□□ -1.11
RAB5C-208ENST00000551338 DEFB130BP0DP73 79 aa8.11□□□□□ -1.11
RAB5C-208ENST00000551338 DEFB130AP0DP74 79 aa8.11□□□□□ -1.11
RAB5C-208ENST00000551338 UBE2D1P51668 147 aa8.11□□□□□ -1.11
RAB5C-208ENST00000551338 HIVEP1P15822 2718 aa8.1□□□□□ -1.11
RAB5C-208ENST00000551338 IGHV3-64A0A075B6Q5 118 aa8.1□□□□□ -1.11
RAB5C-208ENST00000551338 A0A0J9YY99 117 aa8.1□□□□□ -1.11
RAB5C-208ENST00000551338 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms