RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FAM231DQ6ZW35 169 aa8.46□□□□□ -1.06
NPAS3-209ENST00000551008 SCXQ7RTU7 201 aa8.46□□□□□ -1.06
NPAS3-209ENST00000551008 LINC00269Q8N2A0 174 aa8.46□□□□□ -1.06
NPAS3-209ENST00000551008 PGLYRP4Q96LB8 373 aa8.46□□□□□ -1.06
NPAS3-209ENST00000551008 USP17L23D6RBM5 183 aa8.45□□□□□ -1.06
NPAS3-209ENST00000551008 CRPP02741 224 aa8.45□□□□□ -1.06
NPAS3-209ENST00000551008 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
NPAS3-209ENST00000551008 TWIST1Q15672 202 aa8.45□□□□□ -1.06
NPAS3-209ENST00000551008 MIAQ16674 131 aa8.45□□□□□ -1.06
NPAS3-209ENST00000551008 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
NPAS3-209ENST00000551008 GAS8-AS1O95177 125 aa8.44□□□□□ -1.06
NPAS3-209ENST00000551008 HLA-DQA1P01909 254 aa8.44□□□□□ -1.06
NPAS3-209ENST00000551008 PRSS1P07477 247 aa8.44□□□□□ -1.06
NPAS3-209ENST00000551008 SRP19P09132 144 aaKnown RBP8.44□□□□□ -1.06
NPAS3-209ENST00000551008 PKIAP61925 76 aa8.44□□□□□ -1.06
NPAS3-209ENST00000551008 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.44□□□□□ -1.06
NPAS3-209ENST00000551008 FAM210AQ96ND0 272 aa8.44□□□□□ -1.06
NPAS3-209ENST00000551008 TMEM243Q9BU79 118 aa8.44□□□□□ -1.06
NPAS3-209ENST00000551008 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
NPAS3-209ENST00000551008 A0A1B0GUV1 79 aa8.43□□□□□ -1.06
NPAS3-209ENST00000551008 GATCO43716 136 aaKnown RBP8.43□□□□□ -1.06
NPAS3-209ENST00000551008 NDUFS6O75380 124 aaKnown RBP8.43□□□□□ -1.06
NPAS3-209ENST00000551008 LINC01551Q86U37 167 aa8.43□□□□□ -1.06
NPAS3-209ENST00000551008 IGLV10-54A0A075B6I4 117 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 C9JQL5 133 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 CEBPGP53567 150 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 REG3AQ06141 175 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 CT83Q5H943 113 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 SMIM7Q9BQ49 75 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 CHAC1Q9BUX1 264 aa8.42□□□□□ -1.06
NPAS3-209ENST00000551008 GHRHP01286 108 aa8.41□□□□□ -1.06
NPAS3-209ENST00000551008 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
NPAS3-209ENST00000551008 A8MWL6 223 aa8.4□□□□□ -1.06
NPAS3-209ENST00000551008 PANO1I0J062 215 aa8.4□□□□□ -1.06
NPAS3-209ENST00000551008 AMTP48728 403 aa8.4□□□□□ -1.06
NPAS3-209ENST00000551008 COTL1Q14019 142 aa8.4□□□□□ -1.06
NPAS3-209ENST00000551008 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
NPAS3-209ENST00000551008 RNF185Q96GF1 192 aa8.4□□□□□ -1.06
NPAS3-209ENST00000551008 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.06
NPAS3-209ENST00000551008 V9GYV3 84 aa8.4□□□□□ -1.06
NPAS3-209ENST00000551008 FAM231BA6NCW3 169 aa8.39□□□□□ -1.07
NPAS3-209ENST00000551008 SLPIP03973 132 aa8.39□□□□□ -1.07
NPAS3-209ENST00000551008 SRSF3P84103 164 aaKnown RBP8.39□□□□□ -1.07
NPAS3-209ENST00000551008 TSKUQ8WUA8 353 aa8.39□□□□□ -1.07
NPAS3-209ENST00000551008 OSTCQ9NRP0 149 aa8.39□□□□□ -1.07
NPAS3-209ENST00000551008 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
NPAS3-209ENST00000551008 SDHAF1A6NFY7 115 aa8.38□□□□□ -1.07
NPAS3-209ENST00000551008 ZNF727A8MUV8 499 aa8.38□□□□□ -1.07
NPAS3-209ENST00000551008 HIGD1CA8MV81 97 aa8.38□□□□□ -1.07
NPAS3-209ENST00000551008 RPS10P46783 165 aaKnown RBP8.38□□□□□ -1.07
NPAS3-209ENST00000551008 C9orf163Q8N9P6 203 aa8.38□□□□□ -1.07
NPAS3-209ENST00000551008 FAT3Q8TDW7 4589 aa8.37□□□□□ -1.07
NPAS3-209ENST00000551008 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-209ENST00000551008 IGKV2-29A2NJV5 120 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-209ENST00000551008 ISOC2Q96AB3 205 aa8.37□□□□□ -1.07
NPAS3-209ENST00000551008 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-209ENST00000551008 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 A0A1B0GUT8 65 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 NCR2O95944 276 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 TSHBP01222 138 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 ESDP10768 282 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 RPL23P62829 140 aaKnown RBP8.36□□□□□ -1.07
NPAS3-209ENST00000551008 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 C15orf56Q8N910 161 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 TMEM191AQ9H0A3 160 aa8.36□□□□□ -1.07
NPAS3-209ENST00000551008 UBE2L6O14933 153 aa8.35□□□□□ -1.07
NPAS3-209ENST00000551008 RAB4AP20338 218 aa8.35□□□□□ -1.07
NPAS3-209ENST00000551008 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
NPAS3-209ENST00000551008 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
NPAS3-209ENST00000551008 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
NPAS3-209ENST00000551008 NUP35Q8NFH5 326 aa8.35□□□□□ -1.07
NPAS3-209ENST00000551008 PLA2G1BP04054 148 aaKnown RBP8.34□□□□□ -1.07
NPAS3-209ENST00000551008 FGF6P10767 208 aa8.34□□□□□ -1.07
NPAS3-209ENST00000551008 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
NPAS3-209ENST00000551008 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
NPAS3-209ENST00000551008 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
NPAS3-209ENST00000551008 TMEM242Q9NWH2 141 aa8.34□□□□□ -1.07
NPAS3-209ENST00000551008 GAGE12HA6NDE8 117 aa8.33□□□□□ -1.08
NPAS3-209ENST00000551008 SMKR1H3BMG3 65 aa8.33□□□□□ -1.08
NPAS3-209ENST00000551008 APCSP02743 223 aa8.33□□□□□ -1.08
NPAS3-209ENST00000551008 NRACQ8N912 160 aa8.33□□□□□ -1.08
NPAS3-209ENST00000551008 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
NPAS3-209ENST00000551008 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
NPAS3-209ENST00000551008 hDV102S1A0JD36 115 aa8.32□□□□□ -1.08
NPAS3-209ENST00000551008 H7C423 109 aa8.32□□□□□ -1.08
NPAS3-209ENST00000551008 I3L3M4 83 aa8.32□□□□□ -1.08
NPAS3-209ENST00000551008 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
NPAS3-209ENST00000551008 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
NPAS3-209ENST00000551008 CLRN3Q8NCR9 226 aa8.32□□□□□ -1.08
NPAS3-209ENST00000551008 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 PMCHP20382 165 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 FOXI1Q12951 378 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 ADIRFQ15847 76 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 FAM74A3Q4VXF1 159 aa8.31□□□□□ -1.08
NPAS3-209ENST00000551008 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
NPAS3-209ENST00000551008 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms