RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 UBE2L6O14933 153 aa13.13□□□□□ -0.31
CACNB3-218ENST00000550771 GNG4P50150 75 aa13.13□□□□□ -0.31
CACNB3-218ENST00000550771 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
CACNB3-218ENST00000550771 SPACA4Q8TDM5 124 aa13.13□□□□□ -0.31
CACNB3-218ENST00000550771 DPH3Q96FX2 82 aa13.13□□□□□ -0.31
CACNB3-218ENST00000550771 IFNA1P01562 189 aa13.12□□□□□ -0.31
CACNB3-218ENST00000550771 RAB5CP51148 216 aa13.12□□□□□ -0.31
CACNB3-218ENST00000550771 BIN3Q9NQY0 253 aa13.12□□□□□ -0.31
CACNB3-218ENST00000550771 UBR4Q5T4S7 5183 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 RAB19A4D1S5 217 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 TEX46H3BTG2 121 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 NTF3P20783 257 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 AMTP48728 403 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 COTL1Q14019 142 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 LYZL1Q6UWQ5 148 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 C9orf62Q8N4C0 152 aa13.11□□□□□ -0.31
CACNB3-218ENST00000550771 PDE6DO43924 150 aa13.1□□□□□ -0.31
CACNB3-218ENST00000550771 SULT1A2P50226 295 aa13.1□□□□□ -0.31
CACNB3-218ENST00000550771 CFAP161Q6P656 301 aa13.1□□□□□ -0.31
CACNB3-218ENST00000550771 PLAC8Q9NZF1 115 aa13.1□□□□□ -0.31
CACNB3-218ENST00000550771 CTRLP40313 264 aa13.09□□□□□ -0.31
CACNB3-218ENST00000550771 MEF2BQ02080 365 aaPredicted RBP13.09□□□□□ -0.31
CACNB3-218ENST00000550771 CNFNQ9BYD5 112 aa13.09□□□□□ -0.31
CACNB3-218ENST00000550771 EIF5AL1Q6IS14 154 aaKnown RBP13.08□□□□□ -0.32
CACNB3-218ENST00000550771 C15orf56Q8N910 161 aa13.08□□□□□ -0.32
CACNB3-218ENST00000550771 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
CACNB3-218ENST00000550771 GAGE12HA6NDE8 117 aa13.07□□□□□ -0.32
CACNB3-218ENST00000550771 MED9Q9NWA0 146 aa13.07□□□□□ -0.32
CACNB3-218ENST00000550771 hCG_2014768A0A024R1R8 64 aa13.06□□□□□ -0.32
CACNB3-218ENST00000550771 C7orf33Q8WU49 177 aa13.06□□□□□ -0.32
CACNB3-218ENST00000550771 RPS10P46783 165 aaKnown RBP13.05□□□□□ -0.32
CACNB3-218ENST00000550771 TWIST1Q15672 202 aa13.05□□□□□ -0.32
CACNB3-218ENST00000550771 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
CACNB3-218ENST00000550771 NUDT10Q8NFP7 164 aa13.05□□□□□ -0.32
CACNB3-218ENST00000550771 NUDT11Q96G61 164 aa13.05□□□□□ -0.32
CACNB3-218ENST00000550771 PHOX2AO14813 284 aa13.04□□□□□ -0.32
CACNB3-218ENST00000550771 NDUFS6O75380 124 aaKnown RBP13.04□□□□□ -0.32
CACNB3-218ENST00000550771 COX6A2Q02221 97 aa13.04□□□□□ -0.32
CACNB3-218ENST00000550771 H7C423 109 aa13.03□□□□□ -0.32
CACNB3-218ENST00000550771 NCR2O95944 276 aa13.03□□□□□ -0.32
CACNB3-218ENST00000550771 BCL2P10415 239 aa13.03□□□□□ -0.32
CACNB3-218ENST00000550771 IGKV3OR2-268A0A0C4DH90 116 aa13.02□□□□□ -0.33
CACNB3-218ENST00000550771 AMMECR1LQ6DCA0 310 aa13.02□□□□□ -0.33
CACNB3-218ENST00000550771 CHCHD10Q8WYQ3 142 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-218ENST00000550771 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
CACNB3-218ENST00000550771 TRAV26-2A0A0B4J265 109 aa13.01□□□□□ -0.33
CACNB3-218ENST00000550771 HIGD2BQ4VC39 106 aa13.01□□□□□ -0.33
CACNB3-218ENST00000550771 PRSS3P2Q8NHM4 247 aa13.01□□□□□ -0.33
CACNB3-218ENST00000550771 RPP21Q9H633 154 aaKnown RBP13.01□□□□□ -0.33
CACNB3-218ENST00000550771 TAGLN2P37802 199 aaKnown RBP13□□□□□ -0.33
CACNB3-218ENST00000550771 MAJINQ3KP22 176 aa13□□□□□ -0.33
CACNB3-218ENST00000550771 AKAP14Q86UN6 197 aa13□□□□□ -0.33
CACNB3-218ENST00000550771 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
CACNB3-218ENST00000550771 TEX261Q6UWH6 196 aa12.99□□□□□ -0.33
CACNB3-218ENST00000550771 TCTE3Q8IZS6 198 aa12.99□□□□□ -0.33
CACNB3-218ENST00000550771 RPL39LQ96EH5 51 aaKnown RBP12.99□□□□□ -0.33
CACNB3-218ENST00000550771 TNXBP22105 4242 aa12.99□□□□□ -0.33
CACNB3-218ENST00000550771 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
CACNB3-218ENST00000550771 APCSP02743 223 aa12.98□□□□□ -0.33
CACNB3-218ENST00000550771 FGF6P10767 208 aa12.98□□□□□ -0.33
CACNB3-218ENST00000550771 SMIM15Q7Z3B0 74 aa12.98□□□□□ -0.33
CACNB3-218ENST00000550771 GTSF1Q8WW33 167 aa12.98□□□□□ -0.33
CACNB3-218ENST00000550771 RNASE7Q9H1E1 156 aaKnown RBP12.98□□□□□ -0.33
CACNB3-218ENST00000550771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-218ENST00000550771 IGKV2-29A2NJV5 120 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-218ENST00000550771 K7EN84 100 aa12.97□□□□□ -0.33
CACNB3-218ENST00000550771 ZNF25P17030 456 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-218ENST00000550771 PRR3P79522 188 aaKnown RBP12.97□□□□□ -0.33
CACNB3-218ENST00000550771 FOXI1Q12951 378 aa12.97□□□□□ -0.33
CACNB3-218ENST00000550771 STPG4Q8N801 248 aa12.97□□□□□ -0.33
CACNB3-218ENST00000550771 SDHAF1A6NFY7 115 aa12.96□□□□□ -0.33
CACNB3-218ENST00000550771 OCC1Q8TAD7 63 aa12.96□□□□□ -0.33
CACNB3-218ENST00000550771 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
CACNB3-218ENST00000550771 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
CACNB3-218ENST00000550771 LINC00474Q9P2X8 69 aa12.95□□□□□ -0.34
CACNB3-218ENST00000550771 PKIGQ9Y2B9 76 aa12.95□□□□□ -0.34
CACNB3-218ENST00000550771 A0A1B0GVG6 124 aa12.94□□□□□ -0.34
CACNB3-218ENST00000550771 I3L3M4 83 aa12.94□□□□□ -0.34
CACNB3-218ENST00000550771 FOXA3P55318 350 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-218ENST00000550771 A0A096LNI7 61 aa12.93□□□□□ -0.34
CACNB3-218ENST00000550771 TRBV6-5A0A0K0K1A5 114 aa12.93□□□□□ -0.34
CACNB3-218ENST00000550771 SLC51BQ86UW2 128 aa12.93□□□□□ -0.34
CACNB3-218ENST00000550771 BTF3L4Q96K17 158 aa12.93□□□□□ -0.34
CACNB3-218ENST00000550771 FAM231BA6NCW3 169 aa12.92□□□□□ -0.34
CACNB3-218ENST00000550771 XCL1P47992 114 aa12.92□□□□□ -0.34
CACNB3-218ENST00000550771 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
CACNB3-218ENST00000550771 IGHV1-58A0A0C4DH39 117 aa12.91□□□□□ -0.34
CACNB3-218ENST00000550771 PMCHP20382 165 aa12.91□□□□□ -0.34
CACNB3-218ENST00000550771 LYPD6BQ8NI32 183 aa12.91□□□□□ -0.34
CACNB3-218ENST00000550771 TMEM101Q96IK0 257 aa12.91□□□□□ -0.34
CACNB3-218ENST00000550771 LINC00959A0A1B0GUT2 108 aa12.9□□□□□ -0.34
CACNB3-218ENST00000550771 ESDP10768 282 aa12.9□□□□□ -0.34
CACNB3-218ENST00000550771 A8MWL6 223 aa12.89□□□□□ -0.35
CACNB3-218ENST00000550771 CCL25O15444 150 aa12.89□□□□□ -0.35
CACNB3-218ENST00000550771 GATCO43716 136 aaKnown RBP12.89□□□□□ -0.35
CACNB3-218ENST00000550771 SPINK6Q6UWN8 80 aa12.89□□□□□ -0.35
CACNB3-218ENST00000550771 FAM231DQ6ZW35 169 aa12.89□□□□□ -0.35
CACNB3-218ENST00000550771 CARD19Q96LW7 228 aa12.89□□□□□ -0.35
CACNB3-218ENST00000550771 MRAP2Q96G30 205 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms