RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 GAGE12GP0CL81 117 aa10.98□□□□□ -0.65
PDE1B-207ENST00000550620 GAGE12IP0CL82 117 aa10.98□□□□□ -0.65
PDE1B-207ENST00000550620 HTN1P15515 57 aa10.98□□□□□ -0.65
PDE1B-207ENST00000550620 GAGE4Q13068 117 aa10.98□□□□□ -0.65
PDE1B-207ENST00000550620 SS18L2Q9UHA2 77 aa10.98□□□□□ -0.65
PDE1B-207ENST00000550620 SPTA1P02549 2419 aa10.98□□□□□ -0.65
PDE1B-207ENST00000550620 B5MCH6 92 aa10.97□□□□□ -0.65
PDE1B-207ENST00000550620 PROK1P58294 105 aa10.97□□□□□ -0.65
PDE1B-207ENST00000550620 NPC2P61916 151 aa10.97□□□□□ -0.65
PDE1B-207ENST00000550620 ZNF415Q09FC8 603 aa10.97□□□□□ -0.65
PDE1B-207ENST00000550620 RBMY1A1P0DJD3 496 aaKnown RBP10.97□□□□□ -0.65
PDE1B-207ENST00000550620 RBMY1CP0DJD4 496 aa10.97□□□□□ -0.65
PDE1B-207ENST00000550620 RBMY1FQ15415 496 aaKnown RBP10.97□□□□□ -0.65
PDE1B-207ENST00000550620 DNAJC30Q96LL9 226 aa10.97□□□□□ -0.65
PDE1B-207ENST00000550620 IGHV4-30-2A0A087WSY4 118 aa10.96□□□□□ -0.65
PDE1B-207ENST00000550620 CIRBPQ14011 172 aaKnown RBP10.96□□□□□ -0.65
PDE1B-207ENST00000550620 DEFB121Q5J5C9 76 aa10.96□□□□□ -0.65
PDE1B-207ENST00000550620 CLEC2BQ92478 149 aa10.96□□□□□ -0.65
PDE1B-207ENST00000550620 DUX3Q96PT4 197 aa10.96□□□□□ -0.65
PDE1B-207ENST00000550620 B4DSR2 109 aa10.96□□□□□ -0.66
PDE1B-207ENST00000550620 ATP5J2P56134 94 aa10.96□□□□□ -0.66
PDE1B-207ENST00000550620 C10orf99Q6UWK7 81 aa10.96□□□□□ -0.66
PDE1B-207ENST00000550620 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.95□□□□□ -0.66
PDE1B-207ENST00000550620 IGKV2-29A2NJV5 120 aaPredicted RBP10.95□□□□□ -0.66
PDE1B-207ENST00000550620 NDUFA1O15239 70 aa10.95□□□□□ -0.66
PDE1B-207ENST00000550620 TIRAPP58753 221 aa10.95□□□□□ -0.66
PDE1B-207ENST00000550620 A8MZ25 164 aa10.94□□□□□ -0.66
PDE1B-207ENST00000550620 IGHV4-59P01825 116 aa10.94□□□□□ -0.66
PDE1B-207ENST00000550620 HOXD3P31249 432 aaPredicted RBP10.94□□□□□ -0.66
PDE1B-207ENST00000550620 KNCNA6PVL3 124 aa10.94□□□□□ -0.66
PDE1B-207ENST00000550620 COPS9Q8WXC6 57 aa10.94□□□□□ -0.66
PDE1B-207ENST00000550620 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
PDE1B-207ENST00000550620 LINC00467Q9BRT7 94 aa10.94□□□□□ -0.66
PDE1B-207ENST00000550620 IGLV5-45A0A087WSX0 123 aa10.93□□□□□ -0.66
PDE1B-207ENST00000550620 A8MTW9 85 aa10.93□□□□□ -0.66
PDE1B-207ENST00000550620 AVPP01185 164 aa10.93□□□□□ -0.66
PDE1B-207ENST00000550620 Q6ZSV7 163 aa10.93□□□□□ -0.66
PDE1B-207ENST00000550620 DEFB131AP59861 70 aa10.93□□□□□ -0.66
PDE1B-207ENST00000550620 LY6DQ14210 128 aa10.93□□□□□ -0.66
PDE1B-207ENST00000550620 DEFB112Q30KQ8 113 aa10.93□□□□□ -0.66
PDE1B-207ENST00000550620 CDKN2A-AS1Q9UH64 79 aa10.92□□□□□ -0.66
PDE1B-207ENST00000550620 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
PDE1B-207ENST00000550620 IGHV3-53P01767 116 aa10.92□□□□□ -0.66
PDE1B-207ENST00000550620 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
PDE1B-207ENST00000550620 UBE2E2Q96LR5 201 aa10.92□□□□□ -0.66
PDE1B-207ENST00000550620 CCDC179H3BU77 68 aa10.91□□□□□ -0.66
PDE1B-207ENST00000550620 GNLYP22749 145 aa10.91□□□□□ -0.66
PDE1B-207ENST00000550620 Q6ZSN1 163 aa10.91□□□□□ -0.66
PDE1B-207ENST00000550620 TMEM101Q96IK0 257 aa10.91□□□□□ -0.66
PDE1B-207ENST00000550620 ACYP1P07311 99 aa10.9□□□□□ -0.66
PDE1B-207ENST00000550620 HERVK_113P63121 156 aa10.9□□□□□ -0.66
PDE1B-207ENST00000550620 SPTBN1Q01082 2364 aaKnown RBP10.9□□□□□ -0.66
PDE1B-207ENST00000550620 DAND5Q8N907 189 aa10.9□□□□□ -0.66
PDE1B-207ENST00000550620 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.66
PDE1B-207ENST00000550620 PRORYQ9H606 182 aa10.9□□□□□ -0.66
PDE1B-207ENST00000550620 Q9UF83 564 aa10.89□□□□□ -0.67
PDE1B-207ENST00000550620 CEP295Q9C0D2 2601 aa10.89□□□□□ -0.67
PDE1B-207ENST00000550620 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
PDE1B-207ENST00000550620 TRBV7-7A0A0K0K1E9 115 aa10.89□□□□□ -0.67
PDE1B-207ENST00000550620 COX7A2LO14548 114 aa10.89□□□□□ -0.67
PDE1B-207ENST00000550620 CITED2Q99967 270 aaPredicted RBP10.89□□□□□ -0.67
PDE1B-207ENST00000550620 ZFHX3Q15911 3703 aa10.88□□□□□ -0.67
PDE1B-207ENST00000550620 RBMY1BA6NDE4 496 aaKnown RBP10.88□□□□□ -0.67
PDE1B-207ENST00000550620 RBMY1EA6NEQ0 496 aaKnown RBP10.88□□□□□ -0.67
PDE1B-207ENST00000550620 RBMY1DP0C7P1 496 aaKnown RBP10.88□□□□□ -0.67
PDE1B-207ENST00000550620 Q9H8V8 135 aa10.88□□□□□ -0.67
PDE1B-207ENST00000550620 IGLV5-39A0A0G2JS06 123 aa10.87□□□□□ -0.67
PDE1B-207ENST00000550620 BEAN1Q3B7T3 259 aa10.87□□□□□ -0.67
PDE1B-207ENST00000550620 LINC01587Q99440 93 aa10.87□□□□□ -0.67
PDE1B-207ENST00000550620 RS1O15537 224 aa10.87□□□□□ -0.67
PDE1B-207ENST00000550620 DSCR9P59020 149 aa10.87□□□□□ -0.67
PDE1B-207ENST00000550620 NBASA2RRP1 2371 aa10.86□□□□□ -0.67
PDE1B-207ENST00000550620 C11orf72Q8NBR9 251 aa10.86□□□□□ -0.67
PDE1B-207ENST00000550620 MUC6Q6W4X9 2439 aa10.86□□□□□ -0.67
PDE1B-207ENST00000550620 PRM2P04554 102 aa10.86□□□□□ -0.67
PDE1B-207ENST00000550620 IMUPQ9GZP8 106 aa10.86□□□□□ -0.67
PDE1B-207ENST00000550620 VPREB3Q9UKI3 123 aa10.86□□□□□ -0.67
PDE1B-207ENST00000550620 INSP01308 110 aa10.85□□□□□ -0.67
PDE1B-207ENST00000550620 FAM19A3Q7Z5A8 133 aa10.85□□□□□ -0.67
PDE1B-207ENST00000550620 LINC01356Q8N9X3 169 aa10.85□□□□□ -0.67
PDE1B-207ENST00000550620 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
PDE1B-207ENST00000550620 PRRC2AP48634 2157 aaKnown RBP10.85□□□□□ -0.67
PDE1B-207ENST00000550620 COL6A6A6NMZ7 2263 aa10.85□□□□□ -0.67
PDE1B-207ENST00000550620 IGHV3OR16-12A0A075B7B8 117 aa10.84□□□□□ -0.67
PDE1B-207ENST00000550620 J3QLI3 93 aa10.84□□□□□ -0.67
PDE1B-207ENST00000550620 COX6A2Q02221 97 aa10.84□□□□□ -0.67
PDE1B-207ENST00000550620 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.84□□□□□ -0.67
PDE1B-207ENST00000550620 ASH1LQ9NR48 2969 aaKnown RBP10.84□□□□□ -0.67
PDE1B-207ENST00000550620 LINC00242Q5T6M2 205 aa10.84□□□□□ -0.67
PDE1B-207ENST00000550620 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
PDE1B-207ENST00000550620 TRACP01848 142 aa10.83□□□□□ -0.68
PDE1B-207ENST00000550620 SLURP1P55000 103 aa10.83□□□□□ -0.68
PDE1B-207ENST00000550620 MEIG1Q5JSS6 88 aa10.83□□□□□ -0.68
PDE1B-207ENST00000550620 ZNF702PQ9H963 129 aa10.83□□□□□ -0.68
PDE1B-207ENST00000550620 HERV-K104P63124 156 aa10.83□□□□□ -0.68
PDE1B-207ENST00000550620 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
PDE1B-207ENST00000550620 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
PDE1B-207ENST00000550620 ZNF625Q96I27 306 aaPredicted RBP10.82□□□□□ -0.68
PDE1B-207ENST00000550620 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
PDE1B-207ENST00000550620 CSDC2Q9Y534 153 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms