RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 UNQ9165/PRO28630Q6UXU0 137 aa11.99□□□□□ -0.49
RBFOX1-212ENST00000550418 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
RBFOX1-212ENST00000550418 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
RBFOX1-212ENST00000550418 C5orf47Q569G3 176 aa11.99□□□□□ -0.49
RBFOX1-212ENST00000550418 HIST2H2BDQ6DRA6 164 aa11.99□□□□□ -0.49
RBFOX1-212ENST00000550418 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
RBFOX1-212ENST00000550418 PRUNE2Q8WUY3 3088 aa11.98□□□□□ -0.49
RBFOX1-212ENST00000550418 IGHV4-59P01825 116 aa11.98□□□□□ -0.49
RBFOX1-212ENST00000550418 UNC80Q8N2C7 3258 aa11.97□□□□□ -0.49
RBFOX1-212ENST00000550418 TMEM223A0PJW6 202 aa11.97□□□□□ -0.49
RBFOX1-212ENST00000550418 CCDC179H3BU77 68 aa11.97□□□□□ -0.49
RBFOX1-212ENST00000550418 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
RBFOX1-212ENST00000550418 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
RBFOX1-212ENST00000550418 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
RBFOX1-212ENST00000550418 TRAV23DV6A0A075B6W5 121 aa11.96□□□□□ -0.49
RBFOX1-212ENST00000550418 TMEM256-PLSCR3K7ERE1 68 aa11.96□□□□□ -0.49
RBFOX1-212ENST00000550418 DEFB136Q30KP8 78 aa11.96□□□□□ -0.49
RBFOX1-212ENST00000550418 C20orf197Q8N268 126 aa11.96□□□□□ -0.49
RBFOX1-212ENST00000550418 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 A0A0J9YX75 114 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 J3QLI3 93 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 FUSP35637 526 aaKnown RBP eCLIP11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 SORL1Q92673 2214 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 Q6ZQT7 251 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 GPHB5Q86YW7 130 aa11.95□□□□□ -0.5
RBFOX1-212ENST00000550418 IMUPQ9GZP8 106 aa11.94□□□□□ -0.5
RBFOX1-212ENST00000550418 IGHV4-4A0A075B6R2 117 aa11.94□□□□□ -0.5
RBFOX1-212ENST00000550418 NREPQ16612 68 aa11.94□□□□□ -0.5
RBFOX1-212ENST00000550418 CHD9Q3L8U1 2897 aa11.94□□□□□ -0.5
RBFOX1-212ENST00000550418 NDUFA7O95182 113 aa11.94□□□□□ -0.5
RBFOX1-212ENST00000550418 NRACQ8N912 160 aa11.94□□□□□ -0.5
RBFOX1-212ENST00000550418 IGLV4-3A0A075B6K6 122 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 CDKN2A-AS1Q9UH64 79 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 VPREB3Q9UKI3 123 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 HHLA3Q9XRX5 114 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 H3BQ85 93 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 IGF1P05019 195 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 IGHV4-38-2P0DP08 117 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 SLURP1P55000 103 aa11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 USP9YO00507 2555 aaPredicted RBP11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-212ENST00000550418 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
RBFOX1-212ENST00000550418 BRK1Q8WUW1 75 aa11.92□□□□□ -0.5
RBFOX1-212ENST00000550418 ZFP36P26651 326 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-212ENST00000550418 SETD2Q9BYW2 2564 aaPredicted RBP11.92□□□□□ -0.5
RBFOX1-212ENST00000550418 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
RBFOX1-212ENST00000550418 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
RBFOX1-212ENST00000550418 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
RBFOX1-212ENST00000550418 ZFYVE26Q68DK2 2539 aa11.91□□□□□ -0.5
RBFOX1-212ENST00000550418 LINC00308Q8TCZ7 52 aa11.91□□□□□ -0.5
RBFOX1-212ENST00000550418 SMAD5-AS1Q9Y6J3 95 aa11.91□□□□□ -0.5
RBFOX1-212ENST00000550418 ZNF462Q96JM2 2506 aa11.9□□□□□ -0.5
RBFOX1-212ENST00000550418 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
RBFOX1-212ENST00000550418 GYPEP15421 78 aa11.9□□□□□ -0.5
RBFOX1-212ENST00000550418 PRORYQ9H606 182 aa11.9□□□□□ -0.5
RBFOX1-212ENST00000550418 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
RBFOX1-212ENST00000550418 UPK3BQ9BT76 320 aa11.9□□□□□ -0.5
RBFOX1-212ENST00000550418 PDE6GP18545 87 aa11.9□□□□□ -0.51
RBFOX1-212ENST00000550418 C16orf74Q96GX8 76 aa11.9□□□□□ -0.51
RBFOX1-212ENST00000550418 USP9XQ93008 2570 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-212ENST00000550418 FAM236DA0A1B0GTK5 79 aa11.89□□□□□ -0.51
RBFOX1-212ENST00000550418 FAM236CP0DP71 79 aa11.89□□□□□ -0.51
RBFOX1-212ENST00000550418 ARHGAP32A7KAX9 2087 aa11.89□□□□□ -0.51
RBFOX1-212ENST00000550418 PSCAO43653 123 aa11.89□□□□□ -0.51
RBFOX1-212ENST00000550418 SIRPDQ9H106 197 aa11.89□□□□□ -0.51
RBFOX1-212ENST00000550418 IGHV4OR15-8A0A075B7B6 117 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 A0A087WW49 117 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 TRBV27A0A0K0K1C4 114 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 Q6ZS46 218 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 IGHV4-28A0A0C4DH34 117 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 TRBV10-1A0A0K0K1A3 114 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 Q6Q795 121 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 LST1O00453 97 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
RBFOX1-212ENST00000550418 C22orf34Q6ZV56 151 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 ODF3BA8MYP8 253 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 NCR3O14931 201 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 M0QY20 66 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 Q8NA96 180 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 C20orf173Q96LM9 149 aa11.87□□□□□ -0.51
RBFOX1-212ENST00000550418 NUP210LQ5VU65 1888 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 CXCL5P42830 114 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 ZMAT4Q9H898 229 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 C11orf21Q9P2W6 132 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 ATP5EP2Q5VTU8 51 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 SERP2Q8N6R1 65 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 ATG2AQ2TAZ0 1938 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 PRB2P02812 416 aaPredicted RBP11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 APOC4P55056 127 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
RBFOX1-212ENST00000550418 CCL24O00175 119 aa11.85□□□□□ -0.51
RBFOX1-212ENST00000550418 COX7CP15954 63 aa11.85□□□□□ -0.51
RBFOX1-212ENST00000550418 MP68P56378 58 aa11.85□□□□□ -0.51
RBFOX1-212ENST00000550418 ODF3Q96PU9 254 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms