RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 RPS10P46783 165 aaKnown RBP9.09□□□□□ -0.95
NUP188-211ENST00000550219 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 ORMDL3Q8N138 153 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 TRAPPC1Q9Y5R8 145 aa9.09□□□□□ -0.95
NUP188-211ENST00000550219 D6R8Y8 96 aa9.08□□□□□ -0.96
NUP188-211ENST00000550219 PHOX2AO14813 284 aa9.08□□□□□ -0.96
NUP188-211ENST00000550219 NCR2O95944 276 aa9.08□□□□□ -0.96
NUP188-211ENST00000550219 UBE2D3P61077 147 aa9.08□□□□□ -0.96
NUP188-211ENST00000550219 UBE2D2P62837 147 aa9.08□□□□□ -0.96
NUP188-211ENST00000550219 RPL36AP83881 106 aaKnown RBP9.08□□□□□ -0.96
NUP188-211ENST00000550219 RPL36ALQ969Q0 106 aaKnown RBP9.08□□□□□ -0.96
NUP188-211ENST00000550219 RPL39LQ96EH5 51 aaKnown RBP9.08□□□□□ -0.96
NUP188-211ENST00000550219 LAMTOR2Q9Y2Q5 125 aa9.08□□□□□ -0.96
NUP188-211ENST00000550219 A0A087WTM6 91 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 GAGE12JA6NER3 117 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 FABP9Q0Z7S8 132 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 GAGE1Q13065 139 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 GAGE4Q13068 117 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 GAGE5Q13069 117 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 GAGE13Q4V321 117 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 OR10J3Q5JRS4 329 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
NUP188-211ENST00000550219 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
NUP188-211ENST00000550219 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
NUP188-211ENST00000550219 TNFRSF6BO95407 300 aa9.06□□□□□ -0.96
NUP188-211ENST00000550219 POLR2KP53803 58 aaKnown RBP9.06□□□□□ -0.96
NUP188-211ENST00000550219 RPL32P62910 135 aaKnown RBP9.06□□□□□ -0.96
NUP188-211ENST00000550219 CDPF1Q6NVV7 123 aa9.06□□□□□ -0.96
NUP188-211ENST00000550219 PRELID3AQ96N28 172 aa9.06□□□□□ -0.96
NUP188-211ENST00000550219 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
NUP188-211ENST00000550219 NPYP01303 97 aa9.05□□□□□ -0.96
NUP188-211ENST00000550219 TIRAPP58753 221 aa9.05□□□□□ -0.96
NUP188-211ENST00000550219 ALKBH7Q9BT30 221 aaPredicted RBP9.05□□□□□ -0.96
NUP188-211ENST00000550219 TMEM70Q9BUB7 260 aa9.05□□□□□ -0.96
NUP188-211ENST00000550219 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
NUP188-211ENST00000550219 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
NUP188-211ENST00000550219 SDHAF1A6NFY7 115 aa9.04□□□□□ -0.96
NUP188-211ENST00000550219 TRGC2P03986 189 aa9.04□□□□□ -0.96
NUP188-211ENST00000550219 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
NUP188-211ENST00000550219 DAZ4Q86SG3 579 aaKnown RBP9.04□□□□□ -0.96
NUP188-211ENST00000550219 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
NUP188-211ENST00000550219 DAZ3Q9NR90 486 aaKnown RBP9.04□□□□□ -0.96
NUP188-211ENST00000550219 TRBV27A0A0K0K1C4 114 aa9.03□□□□□ -0.96
NUP188-211ENST00000550219 PSCAO43653 123 aa9.03□□□□□ -0.96
NUP188-211ENST00000550219 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
NUP188-211ENST00000550219 C10orf126Q8N4M7 172 aa9.03□□□□□ -0.96
NUP188-211ENST00000550219 GTSF1LQ9H1H1 148 aa9.03□□□□□ -0.96
NUP188-211ENST00000550219 Q9HAA7 133 aa9.02□□□□□ -0.97
NUP188-211ENST00000550219 IGHV3-38A0A0C4DH36 116 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 I3L3M4 83 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 K7EP13 123 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 VCYO14598 125 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 XGP55808 180 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 HAMPP81172 84 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 Q5VSD8 79 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.01□□□□□ -0.97
NUP188-211ENST00000550219 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 MAP1LC3AQ9H492 121 aa9.01□□□□□ -0.97
NUP188-211ENST00000550219 IGHV3-30P01768 117 aa9□□□□□ -0.97
NUP188-211ENST00000550219 IGHV3-33P01772 117 aa9□□□□□ -0.97
NUP188-211ENST00000550219 IGHV3-30-3P0DP02 117 aa9□□□□□ -0.97
NUP188-211ENST00000550219 IGHV3-30-5P0DP03 117 aa9□□□□□ -0.97
NUP188-211ENST00000550219 TMEM97Q5BJF2 176 aa9□□□□□ -0.97
NUP188-211ENST00000550219 NTM-AS1Q6ZSK4 140 aa9□□□□□ -0.97
NUP188-211ENST00000550219 IGLV5-52A0A0A0MRZ9 124 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 TRAV8-6A0A0B4J262 113 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 TSHBP01222 138 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 INAFM2P0DMQ5 153 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 PMCHP20382 165 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 GCSHP23434 173 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 Q8N8P6 123 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 C18orf32Q8TCD1 76 aa8.99□□□□□ -0.97
NUP188-211ENST00000550219 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
NUP188-211ENST00000550219 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
NUP188-211ENST00000550219 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
NUP188-211ENST00000550219 COTL1Q14019 142 aa8.98□□□□□ -0.97
NUP188-211ENST00000550219 IQCJQ1A5X6 159 aa8.98□□□□□ -0.97
NUP188-211ENST00000550219 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
NUP188-211ENST00000550219 LELP1Q5T871 98 aa8.98□□□□□ -0.97
NUP188-211ENST00000550219 NXT2Q9NPJ8 142 aaKnown RBP8.98□□□□□ -0.97
NUP188-211ENST00000550219 LOC389332A0A1B0GUA5 103 aa8.97□□□□□ -0.97
NUP188-211ENST00000550219 TCAPO15273 167 aa8.97□□□□□ -0.97
NUP188-211ENST00000550219 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
NUP188-211ENST00000550219 KIR2DL4Q99706 377 aa8.97□□□□□ -0.97
NUP188-211ENST00000550219 IGHV1-24A0A0C4DH33 117 aa8.96□□□□□ -0.98
NUP188-211ENST00000550219 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
NUP188-211ENST00000550219 K7EMI3 77 aa8.96□□□□□ -0.98
NUP188-211ENST00000550219 ESDP10768 282 aa8.96□□□□□ -0.98
NUP188-211ENST00000550219 Q0VG73 95 aa8.96□□□□□ -0.98
NUP188-211ENST00000550219 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
NUP188-211ENST00000550219 TRBV25-1A0A075B6N4 114 aa8.95□□□□□ -0.98
NUP188-211ENST00000550219 LRCOL1A6NCL2 159 aa8.95□□□□□ -0.98
NUP188-211ENST00000550219 Q8N3U1 123 aa8.95□□□□□ -0.98
NUP188-211ENST00000550219 PRSS3P2Q8NHM4 247 aa8.95□□□□□ -0.98
NUP188-211ENST00000550219 DEFB104AQ8WTQ1 72 aa8.95□□□□□ -0.98
NUP188-211ENST00000550219 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BKO60814 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BJP06899 126 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms