RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 AMMECR1LQ6DCA0 310 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 MRPL54Q6P161 138 aaKnown RBP4.89□□□□□ -1.63
PTCH1-219ENST00000549678 ATRAIDQ6UW56 229 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 CLPSL2Q6UWE3 100 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
PTCH1-219ENST00000549678 AMN1Q8IY45 258 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 GATD1Q8NB37 220 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 RPL39LQ96EH5 51 aaKnown RBP4.89□□□□□ -1.63
PTCH1-219ENST00000549678 MRAP2Q96G30 205 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
PTCH1-219ENST00000549678 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 A0A1B0GW15 77 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 SMIM27A0A1W2PRY6 76 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 I3L3M4 83 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 PPP1R17O96001 155 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 HLA-DQA1P01909 254 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 IQCJQ1A5X6 159 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 CDPF1Q6NVV7 123 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 RNASEKQ6P5S7 137 aaKnown RBP4.88□□□□□ -1.63
PTCH1-219ENST00000549678 UQCC3Q6UW78 93 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 NTM-AS1Q6ZSK4 140 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 COMMD7Q86VX2 200 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 Q8N976 141 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 ANAPC16Q96DE5 110 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 BTF3L4Q96K17 158 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 PGPEP1Q9NXJ5 209 aa4.88□□□□□ -1.63
PTCH1-219ENST00000549678 IGLV5-52A0A0A0MRZ9 124 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 IGKV3OR2-268A0A0C4DH90 116 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 LECT2O14960 151 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 NCR2O95944 276 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 RAB4AP20338 218 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 FCER1GP30273 86 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 CKS2P33552 79 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 RBX1P62877 108 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 HBBP68871 147 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 MIAQ16674 131 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
PTCH1-219ENST00000549678 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.86□□□□□ -1.63
PTCH1-219ENST00000549678 SMKR1H3BMG3 65 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 FUSP35637 526 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTCH1-219ENST00000549678 KRTAP10-2P60368 255 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 IFITM2Q01629 132 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 REG3AQ06141 175 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 SMAGPQ0VAQ4 97 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 Q8N1X5 172 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 LINC00269Q8N2A0 174 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 MAPKAPK5-AS1Q8N8E1 139 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 BAALCQ8WXS3 180 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 TMEM101Q96IK0 257 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 KIR2DL4Q99706 377 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 TMEM242Q9NWH2 141 aa4.86□□□□□ -1.63
PTCH1-219ENST00000549678 IGLV10-54A0A075B6I4 117 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
PTCH1-219ENST00000549678 TRBV6-5A0A0K0K1A5 114 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
PTCH1-219ENST00000549678 S100PP25815 95 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 MRPL51Q4U2R6 128 aaKnown RBP4.85□□□□□ -1.63
PTCH1-219ENST00000549678 C14orf177Q52M58 125 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 FAM104BQ5XKR9 115 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 DGAT2L7PQ6IED9 249 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 ATP5L2Q7Z4Y8 100 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 Q8N814 137 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 RNF185Q96GF1 192 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 TMEM70Q9BUB7 260 aa4.85□□□□□ -1.63
PTCH1-219ENST00000549678 SRRM2Q9UQ35 2752 aaKnown RBP4.85□□□□□ -1.63
PTCH1-219ENST00000549678 FLG2Q5D862 2391 aaPredicted RBP4.84□□□□□ -1.63
PTCH1-219ENST00000549678 TMEM218A2RU14 115 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 C7orf77A4D0Y5 90 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 LINC00862A6NCI5 91 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 D6R8Y8 96 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 H7C423 109 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 VCYO14598 125 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 GCSHP23434 173 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 RPS10P46783 165 aaKnown RBP4.84□□□□□ -1.63
PTCH1-219ENST00000549678 SUMO2P61956 95 aaKnown RBP4.84□□□□□ -1.63
PTCH1-219ENST00000549678 NDUFA5Q16718 116 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 ENHOQ6UWT2 76 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 NTN5Q8WTR8 489 aaPredicted RBP4.84□□□□□ -1.63
PTCH1-219ENST00000549678 TMEM18Q96B42 140 aa4.84□□□□□ -1.63
PTCH1-219ENST00000549678 IGLV4-60A0A075B6I1 120 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 TRAV8-4A0A0B4J246 113 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 A0A1B0GUV1 79 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 LRCOL1A6NCL2 159 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 TNFRSF6BO95407 300 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 PPBPP02775 128 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 FGF6P10767 208 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
PTCH1-219ENST00000549678 ORMDL3Q8N138 153 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 C20orf203Q8NBC4 194 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 SEC11CQ9BY50 192 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 CTDSP1Q9GZU7 261 aa4.83□□□□□ -1.64
PTCH1-219ENST00000549678 TRBV27A0A0K0K1C4 114 aa4.82□□□□□ -1.64
PTCH1-219ENST00000549678 A0A1B0GXF2 115 aa4.82□□□□□ -1.64
PTCH1-219ENST00000549678 TCAPO15273 167 aa4.82□□□□□ -1.64
PTCH1-219ENST00000549678 TSHBP01222 138 aa4.82□□□□□ -1.64
PTCH1-219ENST00000549678 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
PTCH1-219ENST00000549678 RAB5AP20339 215 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms