RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 LOC389332A0A1B0GUA5 103 aa14.45□□□□□ -0.1
VPS29-206ENST00000549578 AMTP48728 403 aa14.45□□□□□ -0.1
VPS29-206ENST00000549578 IQCJQ1A5X6 159 aa14.45□□□□□ -0.1
VPS29-206ENST00000549578 ALKBH7Q9BT30 221 aaPredicted RBP14.45□□□□□ -0.1
VPS29-206ENST00000549578 MAP1LC3AQ9H492 121 aa14.45□□□□□ -0.1
VPS29-206ENST00000549578 RPL32P62910 135 aaKnown RBP14.44□□□□□ -0.1
VPS29-206ENST00000549578 Q8N3U1 123 aa14.44□□□□□ -0.1
VPS29-206ENST00000549578 CHCHD5Q9BSY4 110 aa14.44□□□□□ -0.1
VPS29-206ENST00000549578 DNAH10OSP0CZ25 163 aa14.42□□□□□ -0.1
VPS29-206ENST00000549578 RAB5AP20339 215 aa14.42□□□□□ -0.1
VPS29-206ENST00000549578 KIR2DL4Q99706 377 aa14.42□□□□□ -0.1
VPS29-206ENST00000549578 TMEM243Q9BU79 118 aa14.42□□□□□ -0.1
VPS29-206ENST00000549578 M0R2N4 97 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 FCER1GP30273 86 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 NIT1Q86X76 327 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 PRSS47A8MTI9 375 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 IGHV3-30P01768 117 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 IGHV3-33P01772 117 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 IGHV3-30-3P0DP02 117 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 IGHV3-30-5P0DP03 117 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 GAGE6Q13070 117 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 CHCHD7Q9BUK0 85 aa14.41□□□□□ -0.1
VPS29-206ENST00000549578 DNAH6Q9C0G6 4158 aa14.4□□□□□ -0.1
VPS29-206ENST00000549578 RYR2Q92736 4967 aa14.4□□□□□ -0.1
VPS29-206ENST00000549578 TMEM262E9PQX1 116 aa14.4□□□□□ -0.1
VPS29-206ENST00000549578 TCAPO15273 167 aa14.4□□□□□ -0.1
VPS29-206ENST00000549578 LINC01556Q5JQF7 62 aa14.4□□□□□ -0.1
VPS29-206ENST00000549578 NBDYA0A0U1RRE5 68 aa14.39□□□□□ -0.11
VPS29-206ENST00000549578 TRGC2P03986 189 aa14.39□□□□□ -0.11
VPS29-206ENST00000549578 KRTAP1-5Q9BYS1 174 aa14.39□□□□□ -0.11
VPS29-206ENST00000549578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.38□□□□□ -0.11
VPS29-206ENST00000549578 IGKV2-29A2NJV5 120 aaPredicted RBP14.38□□□□□ -0.11
VPS29-206ENST00000549578 IFI27P40305 119 aaPredicted RBP14.38□□□□□ -0.11
VPS29-206ENST00000549578 A0A087WX48 190 aa14.37□□□□□ -0.11
VPS29-206ENST00000549578 UBE2L6O14933 153 aa14.37□□□□□ -0.11
VPS29-206ENST00000549578 ESDP10768 282 aa14.37□□□□□ -0.11
VPS29-206ENST00000549578 MPV17L2Q567V2 206 aa14.37□□□□□ -0.11
VPS29-206ENST00000549578 Q8N8P6 123 aa14.37□□□□□ -0.11
VPS29-206ENST00000549578 Q8N976 141 aa14.36□□□□□ -0.11
VPS29-206ENST00000549578 NXT2Q9NPJ8 142 aaKnown RBP14.36□□□□□ -0.11
VPS29-206ENST00000549578 TTC32Q5I0X7 151 aa14.35□□□□□ -0.11
VPS29-206ENST00000549578 Q6ZR54 194 aa14.35□□□□□ -0.11
VPS29-206ENST00000549578 PRSS3P2Q8NHM4 247 aa14.35□□□□□ -0.11
VPS29-206ENST00000549578 C18orf32Q8TCD1 76 aa14.35□□□□□ -0.11
VPS29-206ENST00000549578 PKIAP61925 76 aa14.34□□□□□ -0.11
VPS29-206ENST00000549578 RBX1P62877 108 aa14.34□□□□□ -0.11
VPS29-206ENST00000549578 TRAV9-2A0A087WT02 112 aa14.33□□□□□ -0.12
VPS29-206ENST00000549578 FGF6P10767 208 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 C10orf126Q8N4M7 172 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 C20orf203Q8NBC4 194 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 KLK12Q9UKR0 248 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 RYR3Q15413 4870 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 IGLV4-60A0A075B6I1 120 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 H7C423 109 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 AMMECR1LQ6DCA0 310 aa14.31□□□□□ -0.12
VPS29-206ENST00000549578 RNASEKQ6P5S7 137 aaKnown RBP14.31□□□□□ -0.12
VPS29-206ENST00000549578 K7EP13 123 aa14.3□□□□□ -0.12
VPS29-206ENST00000549578 ANGP03950 147 aaKnown RBP14.3□□□□□ -0.12
VPS29-206ENST00000549578 RPL39P62891 51 aaKnown RBP14.3□□□□□ -0.12
VPS29-206ENST00000549578 LAGE3Q14657 143 aa14.3□□□□□ -0.12
VPS29-206ENST00000549578 FA2HQ7L5A8 372 aa14.3□□□□□ -0.12
VPS29-206ENST00000549578 A0A1B0GUV1 79 aa14.29□□□□□ -0.12
VPS29-206ENST00000549578 ORMDL2Q53FV1 153 aa14.29□□□□□ -0.12
VPS29-206ENST00000549578 IBA57-AS1B1ANH7 110 aa14.28□□□□□ -0.12
VPS29-206ENST00000549578 K7EMI3 77 aa14.28□□□□□ -0.12
VPS29-206ENST00000549578 URB1-AS1Q96HZ7 61 aa14.28□□□□□ -0.12
VPS29-206ENST00000549578 TMEM18Q96B42 140 aa14.27□□□□□ -0.12
VPS29-206ENST00000549578 LINC01546A6NGU7 62 aa14.26□□□□□ -0.13
VPS29-206ENST00000549578 CLPSL2Q6UWE3 100 aa14.26□□□□□ -0.13
VPS29-206ENST00000549578 MRPL52Q86TS9 123 aaKnown RBP14.26□□□□□ -0.13
VPS29-206ENST00000549578 UBE2D4Q9Y2X8 147 aa14.26□□□□□ -0.13
VPS29-206ENST00000549578 ZNF25P17030 456 aaPredicted RBP14.25□□□□□ -0.13
VPS29-206ENST00000549578 LINC00269Q8N2A0 174 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 UBE2WQ96B02 151 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 Q9HAA7 133 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 DNAH2Q9P225 4427 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 LINC00614P0C842 121 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 BTF3P20290 206 aaKnown RBP14.25□□□□□ -0.13
VPS29-206ENST00000549578 C2orf66Q6UXQ4 117 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 OR5A1Q8NGJ0 315 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 TMEM101Q96IK0 257 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 AP5S1Q9NUS5 200 aa14.25□□□□□ -0.13
VPS29-206ENST00000549578 C6orf223Q8N319 242 aa14.24□□□□□ -0.13
VPS29-206ENST00000549578 CYSLTR1Q9Y271 337 aa14.24□□□□□ -0.13
VPS29-206ENST00000549578 C1orf134Q5TEV5 83 aa14.23□□□□□ -0.13
VPS29-206ENST00000549578 DGAT2L7PQ6IED9 249 aa14.23□□□□□ -0.13
VPS29-206ENST00000549578 ENHOQ6UWT2 76 aa14.23□□□□□ -0.13
VPS29-206ENST00000549578 CRPP02741 224 aa14.22□□□□□ -0.13
VPS29-206ENST00000549578 RAB5BP61020 215 aa14.22□□□□□ -0.13
VPS29-206ENST00000549578 Q0VG73 95 aa14.22□□□□□ -0.13
VPS29-206ENST00000549578 BAGE3Q86Y29 109 aa14.22□□□□□ -0.13
VPS29-206ENST00000549578 TIMM21Q9BVV7 248 aa14.22□□□□□ -0.13
VPS29-206ENST00000549578 REG3AQ06141 175 aa14.21□□□□□ -0.13
VPS29-206ENST00000549578 SMAGPQ0VAQ4 97 aa14.21□□□□□ -0.13
VPS29-206ENST00000549578 CDC42SE2Q9NRR3 84 aa14.21□□□□□ -0.13
VPS29-206ENST00000549578 SPANXA1Q9NS26 97 aa14.21□□□□□ -0.13
VPS29-206ENST00000549578 PRR34Q9NV39 138 aa14.21□□□□□ -0.13
VPS29-206ENST00000549578 CSDC2Q9Y534 153 aaKnown RBP14.21□□□□□ -0.13
VPS29-206ENST00000549578 TRAV8-3A0A0A6YYJ7 113 aa14.2□□□□□ -0.14
VPS29-206ENST00000549578 RNASE13Q5GAN3 156 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms