RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 TMEM97Q5BJF2 176 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 CHCHD7Q9BUK0 85 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 Q6ZSN1 163 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 SH2D6Q7Z4S9 175 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 WFDC9Q8NEX5 89 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
RAB5B-206ENST00000549505 CREBBPQ92793 2442 aa7.17□□□□□ -1.26
RAB5B-206ENST00000549505 F5H697 171 aa7.16□□□□□ -1.26
RAB5B-206ENST00000549505 ZNF479Q96JC4 524 aa7.16□□□□□ -1.26
RAB5B-206ENST00000549505 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
RAB5B-206ENST00000549505 C9orf66Q5T8R8 295 aa7.16□□□□□ -1.26
RAB5B-206ENST00000549505 ABCA12Q86UK0 2595 aa7.15□□□□□ -1.26
RAB5B-206ENST00000549505 SMIM9A6NGZ8 99 aa7.15□□□□□ -1.26
RAB5B-206ENST00000549505 FAM74A4Q5TZK3 123 aa7.15□□□□□ -1.26
RAB5B-206ENST00000549505 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.26
RAB5B-206ENST00000549505 RNF183Q96D59 192 aa7.15□□□□□ -1.26
RAB5B-206ENST00000549505 IGLV4-3A0A075B6K6 122 aa7.15□□□□□ -1.27
RAB5B-206ENST00000549505 INAFM1C9JVW0 142 aa7.15□□□□□ -1.27
RAB5B-206ENST00000549505 ETDBQ3ZM63 59 aa7.15□□□□□ -1.27
RAB5B-206ENST00000549505 SBSPONQ8IVN8 264 aa7.15□□□□□ -1.27
RAB5B-206ENST00000549505 TRBV25-1A0A075B6N4 114 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 A0A1B0GWB2 263 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 NEGR1Q7Z3B1 354 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 OR5A1Q8NGJ0 315 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 XCL2Q9UBD3 114 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 NACAE9PAV3 2078 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 H3BRM9 83 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 H7C423 109 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 HIST2H2BDQ6DRA6 164 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 C3orf56Q8N813 242 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 C11orf44Q8N8P7 122 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 TNFRSF18Q9Y5U5 241 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 MYMXA0A1B0GTQ4 84 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 TRBV6-4A0A1B0GX49 114 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 RPL39P62891 51 aaKnown RBP7.14□□□□□ -1.27
RAB5B-206ENST00000549505 GTSCR1Q86UQ5 136 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 UBE2D4Q9Y2X8 147 aa7.14□□□□□ -1.27
RAB5B-206ENST00000549505 FLNAP21333 2647 aaKnown RBP7.13□□□□□ -1.27
RAB5B-206ENST00000549505 IGLV5-45A0A087WSX0 123 aa7.13□□□□□ -1.27
RAB5B-206ENST00000549505 DAZ4Q86SG3 579 aaKnown RBP7.13□□□□□ -1.27
RAB5B-206ENST00000549505 MAPKAPK5-AS1Q8N8E1 139 aa7.13□□□□□ -1.27
RAB5B-206ENST00000549505 DAZ3Q9NR90 486 aaKnown RBP7.13□□□□□ -1.27
RAB5B-206ENST00000549505 TRBV7-3A0A075B6L6 115 aa7.13□□□□□ -1.27
RAB5B-206ENST00000549505 UBE2D3P61077 147 aa7.13□□□□□ -1.27
RAB5B-206ENST00000549505 UBE2D2P62837 147 aa7.13□□□□□ -1.27
RAB5B-206ENST00000549505 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
RAB5B-206ENST00000549505 MRPL16Q9NX20 251 aaKnown RBP7.13□□□□□ -1.27
RAB5B-206ENST00000549505 OTOGQ6ZRI0 2925 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 TMEM223A0PJW6 202 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 K7ERJ3 54 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 WFDC2Q14508 124 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 DOPEY2Q9Y3R5 2298 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 K7EP34 96 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 K7EQD1 137 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 A6NDN8 102 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 NMUP48645 174 aa7.12□□□□□ -1.27
RAB5B-206ENST00000549505 PHLDA1Q8WV24 401 aaPredicted RBP7.12□□□□□ -1.27
RAB5B-206ENST00000549505 CUBNO60494 3623 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 TINCRA0A1B0GVN0 87 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 PRM2P04554 102 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 SFTA2Q6UW10 78 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 LEPROTO15243 131 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 TIRAPP58753 221 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 HERVK_113P61574 105 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 CEND1Q8N111 149 aa7.11□□□□□ -1.27
RAB5B-206ENST00000549505 AGRNO00468 2067 aa7.1□□□□□ -1.27
RAB5B-206ENST00000549505 PF4P02776 101 aa7.1□□□□□ -1.27
RAB5B-206ENST00000549505 OR11H2Q8NH07 326 aa7.1□□□□□ -1.27
RAB5B-206ENST00000549505 PRADC1Q9BSG0 188 aa7.1□□□□□ -1.27
RAB5B-206ENST00000549505 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
RAB5B-206ENST00000549505 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
RAB5B-206ENST00000549505 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 FABP2P12104 132 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 Q6ZTI0 123 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 PGPEP1Q9NXJ5 209 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 X6R8D5 127 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 A8MZ25 164 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 GCSHP23434 173 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 Q9UF83 564 aa7.09□□□□□ -1.27
RAB5B-206ENST00000549505 HELZ2Q9BYK8 2649 aaKnown RBP7.09□□□□□ -1.27
RAB5B-206ENST00000549505 H3BMG7 143 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 MT-ATP8P03928 68 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 RRN3P1Q2M238 152 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 ANAPC13Q9BS18 74 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 TRBV20-1A0A075B6N2 111 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 TRGV1A0A0A0MS02 117 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 UBE2D1P51668 147 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 RPL36AP83881 106 aaKnown RBP7.08□□□□□ -1.28
RAB5B-206ENST00000549505 FHL2Q14192 279 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.08□□□□□ -1.28
RAB5B-206ENST00000549505 RPL36ALQ969Q0 106 aaKnown RBP7.08□□□□□ -1.28
RAB5B-206ENST00000549505 VCX2Q9H322 139 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 ITPR2Q14571 2701 aa7.08□□□□□ -1.28
RAB5B-206ENST00000549505 SLC25A29Q8N8R3 303 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms