RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 AMTP48728 403 aa13.17□□□□□ -0.3
RBFOX1-211ENST00000548749 RAB14P61106 215 aa13.17□□□□□ -0.3
RBFOX1-211ENST00000548749 NUP35Q8NFH5 326 aa13.17□□□□□ -0.3
RBFOX1-211ENST00000548749 APOBP04114 4563 aaKnown RBP13.17□□□□□ -0.3
RBFOX1-211ENST00000548749 RIGQ13278 110 aa13.16□□□□□ -0.3
RBFOX1-211ENST00000548749 LINC00269Q8N2A0 174 aa13.16□□□□□ -0.3
RBFOX1-211ENST00000548749 TMEM191AQ9H0A3 160 aa13.16□□□□□ -0.3
RBFOX1-211ENST00000548749 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
RBFOX1-211ENST00000548749 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
RBFOX1-211ENST00000548749 UBE2L6O14933 153 aa13.15□□□□□ -0.3
RBFOX1-211ENST00000548749 MIAQ16674 131 aa13.14□□□□□ -0.31
RBFOX1-211ENST00000548749 SDHAF1A6NFY7 115 aa13.13□□□□□ -0.31
RBFOX1-211ENST00000548749 GAS8-AS1O95177 125 aa13.13□□□□□ -0.31
RBFOX1-211ENST00000548749 AMN1Q8IY45 258 aa13.13□□□□□ -0.31
RBFOX1-211ENST00000548749 RNF185Q96GF1 192 aa13.13□□□□□ -0.31
RBFOX1-211ENST00000548749 PRR34Q9NV39 138 aa13.13□□□□□ -0.31
RBFOX1-211ENST00000548749 HLA-DQA1P01909 254 aa13.12□□□□□ -0.31
RBFOX1-211ENST00000548749 RAB4AP20338 218 aa13.12□□□□□ -0.31
RBFOX1-211ENST00000548749 IGLV4-60A0A075B6I1 120 aa13.11□□□□□ -0.31
RBFOX1-211ENST00000548749 SMIM27A0A1W2PRY6 76 aa13.11□□□□□ -0.31
RBFOX1-211ENST00000548749 REG3AQ06141 175 aa13.11□□□□□ -0.31
RBFOX1-211ENST00000548749 C20orf203Q8NBC4 194 aa13.11□□□□□ -0.31
RBFOX1-211ENST00000548749 MRAP2Q96G30 205 aa13.11□□□□□ -0.31
RBFOX1-211ENST00000548749 KRTAP4-5Q9BYR2 181 aa13.11□□□□□ -0.31
RBFOX1-211ENST00000548749 ST20Q9HBF5 79 aa13.11□□□□□ -0.31
RBFOX1-211ENST00000548749 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
RBFOX1-211ENST00000548749 A0A1B0GUV1 79 aa13.1□□□□□ -0.31
RBFOX1-211ENST00000548749 NCR2O95944 276 aa13.1□□□□□ -0.31
RBFOX1-211ENST00000548749 APCSP02743 223 aa13.1□□□□□ -0.31
RBFOX1-211ENST00000548749 PMCHP20382 165 aa13.1□□□□□ -0.31
RBFOX1-211ENST00000548749 SMKR1H3BMG3 65 aa13.09□□□□□ -0.31
RBFOX1-211ENST00000548749 I3L3M4 83 aa13.09□□□□□ -0.31
RBFOX1-211ENST00000548749 RPS10P46783 165 aaKnown RBP13.09□□□□□ -0.31
RBFOX1-211ENST00000548749 CAMPP49913 170 aa13.09□□□□□ -0.31
RBFOX1-211ENST00000548749 XGP55808 180 aa13.09□□□□□ -0.31
RBFOX1-211ENST00000548749 Q8N1X5 172 aa13.09□□□□□ -0.31
RBFOX1-211ENST00000548749 IGLV10-54A0A075B6I4 117 aa13.08□□□□□ -0.32
RBFOX1-211ENST00000548749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.08□□□□□ -0.32
RBFOX1-211ENST00000548749 IGKV2-29A2NJV5 120 aaPredicted RBP13.08□□□□□ -0.32
RBFOX1-211ENST00000548749 PCLOQ9Y6V0 5065 aa13.07□□□□□ -0.32
RBFOX1-211ENST00000548749 AMMECR1LQ6DCA0 310 aa13.07□□□□□ -0.32
RBFOX1-211ENST00000548749 TMEM70Q9BUB7 260 aa13.07□□□□□ -0.32
RBFOX1-211ENST00000548749 USP17L23D6RBM5 183 aa13.06□□□□□ -0.32
RBFOX1-211ENST00000548749 HAMPP81172 84 aa13.06□□□□□ -0.32
RBFOX1-211ENST00000548749 C14orf177Q52M58 125 aa13.06□□□□□ -0.32
RBFOX1-211ENST00000548749 CLLU1Q5K131 121 aa13.06□□□□□ -0.32
RBFOX1-211ENST00000548749 MRPL54Q6P161 138 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-211ENST00000548749 RNASEKQ6P5S7 137 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-211ENST00000548749 TMEM242Q9NWH2 141 aa13.06□□□□□ -0.32
RBFOX1-211ENST00000548749 A0A1B0GW15 77 aa13.05□□□□□ -0.32
RBFOX1-211ENST00000548749 LINC01620Q4KN68 170 aa13.05□□□□□ -0.32
RBFOX1-211ENST00000548749 FAM104BQ5XKR9 115 aa13.05□□□□□ -0.32
RBFOX1-211ENST00000548749 IGKV3OR2-268A0A0C4DH90 116 aa13.04□□□□□ -0.32
RBFOX1-211ENST00000548749 TSHBP01222 138 aa13.04□□□□□ -0.32
RBFOX1-211ENST00000548749 KRTAP26-1Q6PEX3 210 aa13.04□□□□□ -0.32
RBFOX1-211ENST00000548749 TRAV8-4A0A0B4J246 113 aa13.03□□□□□ -0.32
RBFOX1-211ENST00000548749 H7C423 109 aa13.03□□□□□ -0.32
RBFOX1-211ENST00000548749 FGF6P10767 208 aa13.03□□□□□ -0.32
RBFOX1-211ENST00000548749 POLR2KP53803 58 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-211ENST00000548749 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-211ENST00000548749 FAM30AQ9NZY2 134 aa13.03□□□□□ -0.32
RBFOX1-211ENST00000548749 TRBV27A0A0K0K1C4 114 aa13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 PPP1R2P9O14990 202 aa13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 PPP1R17O96001 155 aa13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 S100A8P05109 93 aa13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 HBBP68871 147 aa13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 IFITM2Q01629 132 aa13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 PNRC1Q12796 327 aaPredicted RBP13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 NRACQ8N912 160 aa13.02□□□□□ -0.33
RBFOX1-211ENST00000548749 ABCA13Q86UQ4 5058 aa13.01□□□□□ -0.33
RBFOX1-211ENST00000548749 F8W036 122 aa13□□□□□ -0.33
RBFOX1-211ENST00000548749 VCYO14598 125 aa13□□□□□ -0.33
RBFOX1-211ENST00000548749 ESDP10768 282 aa13□□□□□ -0.33
RBFOX1-211ENST00000548749 FCER1GP30273 86 aa13□□□□□ -0.33
RBFOX1-211ENST00000548749 CKS2P33552 79 aa13□□□□□ -0.33
RBFOX1-211ENST00000548749 SUMO2P61956 95 aaKnown RBP13□□□□□ -0.33
RBFOX1-211ENST00000548749 BTF3L4Q96K17 158 aa13□□□□□ -0.33
RBFOX1-211ENST00000548749 A0A1B0GXF2 115 aa12.99□□□□□ -0.33
RBFOX1-211ENST00000548749 EPM2AB3EWF7 344 aa12.99□□□□□ -0.33
RBFOX1-211ENST00000548749 SMR3BP02814 79 aaPredicted RBP12.99□□□□□ -0.33
RBFOX1-211ENST00000548749 PRSS1P07477 247 aa12.99□□□□□ -0.33
RBFOX1-211ENST00000548749 TMEM101Q96IK0 257 aa12.99□□□□□ -0.33
RBFOX1-211ENST00000548749 LINC00862A6NCI5 91 aa12.98□□□□□ -0.33
RBFOX1-211ENST00000548749 MT-ND4LP03901 98 aa12.98□□□□□ -0.33
RBFOX1-211ENST00000548749 ZNF25P17030 456 aaPredicted RBP12.98□□□□□ -0.33
RBFOX1-211ENST00000548749 C7orf77A4D0Y5 90 aa12.97□□□□□ -0.33
RBFOX1-211ENST00000548749 OR5A1Q8NGJ0 315 aa12.97□□□□□ -0.33
RBFOX1-211ENST00000548749 ANAPC16Q96DE5 110 aa12.97□□□□□ -0.33
RBFOX1-211ENST00000548749 KIR2DL4Q99706 377 aa12.97□□□□□ -0.33
RBFOX1-211ENST00000548749 GAGE12HA6NDE8 117 aa12.96□□□□□ -0.33
RBFOX1-211ENST00000548749 D6R8Y8 96 aa12.96□□□□□ -0.33
RBFOX1-211ENST00000548749 ATP5L2Q7Z4Y8 100 aa12.96□□□□□ -0.33
RBFOX1-211ENST00000548749 Q5VSD8 79 aa12.95□□□□□ -0.34
RBFOX1-211ENST00000548749 Q6ZSA8 131 aa12.95□□□□□ -0.34
RBFOX1-211ENST00000548749 CHCHD10Q8WYQ3 142 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-211ENST00000548749 C20orf78Q9BR46 151 aa12.95□□□□□ -0.34
RBFOX1-211ENST00000548749 hDV102S1A0JD36 115 aa12.94□□□□□ -0.34
RBFOX1-211ENST00000548749 TNFRSF6BO95407 300 aa12.94□□□□□ -0.34
RBFOX1-211ENST00000548749 UQCC3Q6UW78 93 aa12.94□□□□□ -0.34
RBFOX1-211ENST00000548749 CLRN3Q8NCR9 226 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms