RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
PTCH1-217ENST00000548420 ISOC2Q96AB3 205 aa9.17□□□□□ -0.94
PTCH1-217ENST00000548420 NIT2Q9NQR4 276 aa9.17□□□□□ -0.94
PTCH1-217ENST00000548420 V9GYV3 84 aa9.17□□□□□ -0.94
PTCH1-217ENST00000548420 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-217ENST00000548420 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-217ENST00000548420 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
PTCH1-217ENST00000548420 PGLYRP4Q96LB8 373 aa9.16□□□□□ -0.94
PTCH1-217ENST00000548420 Q9HAA7 133 aa9.16□□□□□ -0.94
PTCH1-217ENST00000548420 CRCT1Q9UGL9 99 aa9.16□□□□□ -0.94
PTCH1-217ENST00000548420 HIGD1CA8MV81 97 aa9.15□□□□□ -0.94
PTCH1-217ENST00000548420 IQCJQ1A5X6 159 aa9.15□□□□□ -0.94
PTCH1-217ENST00000548420 TM2D2Q9BX73 214 aa9.15□□□□□ -0.94
PTCH1-217ENST00000548420 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
PTCH1-217ENST00000548420 URGCP-MRPS24S4R325 110 aa9.15□□□□□ -0.94
PTCH1-217ENST00000548420 A0A087WX48 190 aa9.14□□□□□ -0.95
PTCH1-217ENST00000548420 ELOBQ15370 118 aa9.14□□□□□ -0.95
PTCH1-217ENST00000548420 ATRAIDQ6UW56 229 aa9.14□□□□□ -0.95
PTCH1-217ENST00000548420 Q8N814 137 aa9.14□□□□□ -0.95
PTCH1-217ENST00000548420 C15orf54Q8N8G6 183 aa9.14□□□□□ -0.95
PTCH1-217ENST00000548420 KLK12Q9UKR0 248 aa9.14□□□□□ -0.95
PTCH1-217ENST00000548420 A0A1B0GUT8 65 aa9.13□□□□□ -0.95
PTCH1-217ENST00000548420 PSCAO43653 123 aa9.13□□□□□ -0.95
PTCH1-217ENST00000548420 PKIAP61925 76 aa9.13□□□□□ -0.95
PTCH1-217ENST00000548420 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
PTCH1-217ENST00000548420 COX11Q9Y6N1 276 aa9.13□□□□□ -0.95
PTCH1-217ENST00000548420 TRBV25-1A0A075B6N4 114 aa9.12□□□□□ -0.95
PTCH1-217ENST00000548420 TMEM262E9PQX1 116 aa9.12□□□□□ -0.95
PTCH1-217ENST00000548420 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
PTCH1-217ENST00000548420 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
PTCH1-217ENST00000548420 NUP35Q8NFH5 326 aa9.12□□□□□ -0.95
PTCH1-217ENST00000548420 CHCHD5Q9BSY4 110 aa9.12□□□□□ -0.95
PTCH1-217ENST00000548420 TMEM191AQ9H0A3 160 aa9.12□□□□□ -0.95
PTCH1-217ENST00000548420 TRAV26-2A0A0B4J265 109 aa9.11□□□□□ -0.95
PTCH1-217ENST00000548420 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
PTCH1-217ENST00000548420 Q0VG73 95 aa9.11□□□□□ -0.95
PTCH1-217ENST00000548420 ADIRFQ15847 76 aa9.11□□□□□ -0.95
PTCH1-217ENST00000548420 KCNIP4Q6PIL6 250 aa9.11□□□□□ -0.95
PTCH1-217ENST00000548420 TRBV6-5A0A0K0K1A5 114 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 SMIM27A0A1W2PRY6 76 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 RBX1P62877 108 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 Q8N976 141 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 BORCS7Q96B45 105 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 RMI2Q96E14 147 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 RNF185Q96GF1 192 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
PTCH1-217ENST00000548420 A0A1B0GUV1 79 aa9.09□□□□□ -0.95
PTCH1-217ENST00000548420 RAB14P61106 215 aa9.09□□□□□ -0.95
PTCH1-217ENST00000548420 WFDC2Q14508 124 aa9.09□□□□□ -0.95
PTCH1-217ENST00000548420 LINC01620Q4KN68 170 aa9.09□□□□□ -0.95
PTCH1-217ENST00000548420 CLLU1Q5K131 121 aa9.09□□□□□ -0.95
PTCH1-217ENST00000548420 RPL39LQ96EH5 51 aaKnown RBP9.09□□□□□ -0.95
PTCH1-217ENST00000548420 NAT8BQ9UHF3 227 aa9.09□□□□□ -0.95
PTCH1-217ENST00000548420 ANGP03950 147 aaKnown RBP9.08□□□□□ -0.96
PTCH1-217ENST00000548420 RAB4AP20338 218 aa9.08□□□□□ -0.96
PTCH1-217ENST00000548420 IFITM2Q01629 132 aa9.08□□□□□ -0.96
PTCH1-217ENST00000548420 GAGE6Q13070 117 aa9.08□□□□□ -0.96
PTCH1-217ENST00000548420 RIGQ13278 110 aa9.08□□□□□ -0.96
PTCH1-217ENST00000548420 TMEM243Q9BU79 118 aa9.08□□□□□ -0.96
PTCH1-217ENST00000548420 IGKV2D-24A0A075B6R9 120 aa9.07□□□□□ -0.96
PTCH1-217ENST00000548420 COTL1Q14019 142 aa9.07□□□□□ -0.96
PTCH1-217ENST00000548420 C20orf203Q8NBC4 194 aa9.07□□□□□ -0.96
PTCH1-217ENST00000548420 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
PTCH1-217ENST00000548420 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
PTCH1-217ENST00000548420 NCR2O95944 276 aa9.06□□□□□ -0.96
PTCH1-217ENST00000548420 POLR2KP53803 58 aaKnown RBP9.06□□□□□ -0.96
PTCH1-217ENST00000548420 RPL37AP61513 92 aaKnown RBP9.06□□□□□ -0.96
PTCH1-217ENST00000548420 MIAQ16674 131 aa9.06□□□□□ -0.96
PTCH1-217ENST00000548420 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
PTCH1-217ENST00000548420 AMN1Q8IY45 258 aa9.06□□□□□ -0.96
PTCH1-217ENST00000548420 BAALCQ8WXS3 180 aa9.06□□□□□ -0.96
PTCH1-217ENST00000548420 MRAP2Q96G30 205 aa9.06□□□□□ -0.96
PTCH1-217ENST00000548420 IGLV4-60A0A075B6I1 120 aa9.05□□□□□ -0.96
PTCH1-217ENST00000548420 AMTP48728 403 aa9.05□□□□□ -0.96
PTCH1-217ENST00000548420 LINC00269Q8N2A0 174 aa9.05□□□□□ -0.96
PTCH1-217ENST00000548420 C1orf43Q9BWL3 253 aa9.05□□□□□ -0.96
PTCH1-217ENST00000548420 A0A1B0GW15 77 aa9.04□□□□□ -0.96
PTCH1-217ENST00000548420 CRPP02741 224 aa9.04□□□□□ -0.96
PTCH1-217ENST00000548420 RPS10P46783 165 aaKnown RBP9.04□□□□□ -0.96
PTCH1-217ENST00000548420 FAM104BQ5XKR9 115 aa9.04□□□□□ -0.96
PTCH1-217ENST00000548420 TRBV27A0A0K0K1C4 114 aa9.03□□□□□ -0.96
PTCH1-217ENST00000548420 H7C423 109 aa9.03□□□□□ -0.96
PTCH1-217ENST00000548420 I3L3M4 83 aa9.03□□□□□ -0.96
PTCH1-217ENST00000548420 LECT2O14960 151 aa9.03□□□□□ -0.96
PTCH1-217ENST00000548420 PNRC1Q12796 327 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-217ENST00000548420 NRACQ8N912 160 aa9.03□□□□□ -0.96
PTCH1-217ENST00000548420 ST20Q9HBF5 79 aa9.03□□□□□ -0.96
PTCH1-217ENST00000548420 A0A1B0GXF2 115 aa9.02□□□□□ -0.97
PTCH1-217ENST00000548420 PPP1R2P9O14990 202 aa9.02□□□□□ -0.97
PTCH1-217ENST00000548420 ESDP10768 282 aa9.02□□□□□ -0.97
PTCH1-217ENST00000548420 REG3AQ06141 175 aa9.02□□□□□ -0.97
PTCH1-217ENST00000548420 MRPL51Q4U2R6 128 aaKnown RBP9.02□□□□□ -0.97
PTCH1-217ENST00000548420 Q6ZRU5 148 aa9.02□□□□□ -0.97
PTCH1-217ENST00000548420 TRAV8-4A0A0B4J246 113 aa9.01□□□□□ -0.97
PTCH1-217ENST00000548420 UBE2L6O14933 153 aa9.01□□□□□ -0.97
PTCH1-217ENST00000548420 PPP1R17O96001 155 aa9.01□□□□□ -0.97
PTCH1-217ENST00000548420 TSHBP01222 138 aa9.01□□□□□ -0.97
PTCH1-217ENST00000548420 PMCHP20382 165 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms