RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 OTORQ9NRC9 128 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 TP73-AS1Q9UF72 201 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 FRMD6-AS1P0C7T7 363 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 ZNF56Q15929 161 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 ETDBQ3ZM63 59 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 FOXI2Q6ZQN5 318 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 PRNTQ86SH4 94 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 DEFB125Q8N687 156 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 IGKV1-39P01597 117 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 IGKV1D-39P04432 117 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 MLANAQ16655 118 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 LINC01545Q5VT33 79 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 GPHB5Q86YW7 130 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 MPLKIPQ8TAP9 179 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 FAM30AQ9NZY2 134 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 LY96Q9Y6Y9 160 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 X6R8D5 127 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 C9orf118A6NHY6 69 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 UQCRQO14949 82 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 TIMM17BO60830 172 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 HLA-DMBP28068 263 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 DAZ2Q13117 558 aaKnown RBP4.2□□□□□ -1.74
PTPRB-206ENST00000548122 DAZ4Q86SG3 579 aaKnown RBP4.2□□□□□ -1.74
PTPRB-206ENST00000548122 DAZ3Q9NR90 486 aaKnown RBP4.2□□□□□ -1.74
PTPRB-206ENST00000548122 OTOGQ6ZRI0 2925 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 IGHV7-4-1A0A0J9YVY3 117 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 K7EP34 96 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 HTN3P15516 51 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 FXYD7P58549 80 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 CELA1Q9UNI1 258 aa4.2□□□□□ -1.74
PTPRB-206ENST00000548122 TRAV21A0A0B4J279 112 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 E7EUB6 86 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
PTPRB-206ENST00000548122 TMEM61Q8N0U2 210 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 LYPD1Q8N2G4 141 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 CHCHD5Q9BSY4 110 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 H7C2G1 150 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 PPP1R17O96001 155 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 IGLV2-14P01704 120 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 H3BRM9 83 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 TCRAP04437 139 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 KRTAP10-3P60369 221 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 NUP35Q8NFH5 326 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 TRAV26-2A0A0B4J265 109 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 C9JCJ5 164 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 PEX7O00628 323 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 DUSP14O95147 198 aaKnown RBP4.19□□□□□ -1.74
PTPRB-206ENST00000548122 PRR4Q16378 134 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 RRN3P1Q2M238 152 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 C6orf99Q4VX62 202 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 LINC00479Q96M42 142 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 ZNF580Q9UK33 172 aa4.19□□□□□ -1.74
PTPRB-206ENST00000548122 FAM236AA0A1B0GUQ0 79 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 FAM236BA0A1B0GV22 79 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 K7EIM0 57 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 EGR2P11161 476 aaPredicted RBP4.18□□□□□ -1.74
PTPRB-206ENST00000548122 CXCL6P80162 114 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 BEAN1Q3B7T3 259 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 C2orf48Q96LS8 159 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 V9GYV3 84 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 PRSS29PA6NIE9 313 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 ATP5G1P05496 136 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 LINC00173Q6ZV60 143 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 F8W1H4 67 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 M0R2P5 195 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 PDE6HQ13956 83 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 UNQ9165/PRO28630Q6UXU0 137 aa4.18□□□□□ -1.74
PTPRB-206ENST00000548122 RPP21Q9H633 154 aaKnown RBP4.18□□□□□ -1.74
PTPRB-206ENST00000548122 A0A1W2PPM0 123 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 CTSGP08311 255 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 IGLC6P0CF74 106 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 LINC00694P0DN24 101 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 ASIPP42127 132 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 DEFB114Q30KQ6 69 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 CD7P09564 240 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 CRIP2P52943 208 aaPredicted RBP4.17□□□□□ -1.74
PTPRB-206ENST00000548122 MRPS36P82909 103 aaKnown RBP4.17□□□□□ -1.74
PTPRB-206ENST00000548122 SH2D6Q7Z4S9 175 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 NBPF19A0A087WUL8 3843 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 INS-IGF2F8WCM5 200 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 I3L2K1 104 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 K7EMT4 169 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 BRWD1-AS2P59051 145 aa4.17□□□□□ -1.74
PTPRB-206ENST00000548122 TRAV23DV6A0A075B6W5 121 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 A0A1B0GUT8 65 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 M0R3E3 92 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 CRYGDP07320 174 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 COX8AP10176 69 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 NDUFV3P56181 108 aaKnown RBP4.16□□□□□ -1.74
PTPRB-206ENST00000548122 FHL3Q13643 280 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 DEFB135Q30KP9 77 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 SPANXN1Q5VSR9 72 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 Q9HAA7 133 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 XCL2Q9UBD3 114 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
PTPRB-206ENST00000548122 IGHV4-30-4P0DP06 118 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms