RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 RBX1P62877 108 aa17.34■□□□□ 0.37
SRSF9-202ENST00000546942 RASL11AQ6T310 242 aa17.34■□□□□ 0.37
SRSF9-202ENST00000546942 GTSF1Q8WW33 167 aa17.34■□□□□ 0.37
SRSF9-202ENST00000546942 SRSF3P84103 164 aaKnown RBP17.33■□□□□ 0.36
SRSF9-202ENST00000546942 HLA-DQA1P01909 254 aa17.32■□□□□ 0.36
SRSF9-202ENST00000546942 TSKUQ8WUA8 353 aa17.32■□□□□ 0.36
SRSF9-202ENST00000546942 IQCJQ1A5X6 159 aa17.31■□□□□ 0.36
SRSF9-202ENST00000546942 SMIM15Q7Z3B0 74 aa17.31■□□□□ 0.36
SRSF9-202ENST00000546942 LINC00269Q8N2A0 174 aa17.31■□□□□ 0.36
SRSF9-202ENST00000546942 ISOC2Q96AB3 205 aa17.31■□□□□ 0.36
SRSF9-202ENST00000546942 NIT2Q9NQR4 276 aa17.31■□□□□ 0.36
SRSF9-202ENST00000546942 RPL23P62829 140 aaKnown RBP17.3■□□□□ 0.36
SRSF9-202ENST00000546942 MIAQ16674 131 aa17.3■□□□□ 0.36
SRSF9-202ENST00000546942 BORCS7Q96B45 105 aa17.3■□□□□ 0.36
SRSF9-202ENST00000546942 CLLU1Q5K131 121 aa17.28■□□□□ 0.36
SRSF9-202ENST00000546942 TRAV26-2A0A0B4J265 109 aa17.27■□□□□ 0.36
SRSF9-202ENST00000546942 ADIRFQ15847 76 aa17.27■□□□□ 0.36
SRSF9-202ENST00000546942 C14orf177Q52M58 125 aa17.27■□□□□ 0.36
SRSF9-202ENST00000546942 Q6ZSA8 131 aa17.27■□□□□ 0.36
SRSF9-202ENST00000546942 TMEM243Q9BU79 118 aa17.27■□□□□ 0.36
SRSF9-202ENST00000546942 PGLYRP4Q96LB8 373 aa17.26■□□□□ 0.35
SRSF9-202ENST00000546942 PRR34Q9NV39 138 aa17.26■□□□□ 0.35
SRSF9-202ENST00000546942 V9GYV3 84 aa17.26■□□□□ 0.35
SRSF9-202ENST00000546942 HIGD1CA8MV81 97 aa17.25■□□□□ 0.35
SRSF9-202ENST00000546942 USP17L23D6RBM5 183 aa17.25■□□□□ 0.35
SRSF9-202ENST00000546942 GATD1Q8NB37 220 aa17.25■□□□□ 0.35
SRSF9-202ENST00000546942 IGLV10-54A0A075B6I4 117 aa17.24■□□□□ 0.35
SRSF9-202ENST00000546942 A0A1B0GUT8 65 aa17.24■□□□□ 0.35
SRSF9-202ENST00000546942 REG3AQ06141 175 aa17.24■□□□□ 0.35
SRSF9-202ENST00000546942 UBE2L6O14933 153 aa17.23■□□□□ 0.35
SRSF9-202ENST00000546942 AMTP48728 403 aa17.22■□□□□ 0.35
SRSF9-202ENST00000546942 COTL1Q14019 142 aa17.22■□□□□ 0.35
SRSF9-202ENST00000546942 C20orf203Q8NBC4 194 aa17.22■□□□□ 0.35
SRSF9-202ENST00000546942 IGLV4-60A0A075B6I1 120 aa17.21■□□□□ 0.35
SRSF9-202ENST00000546942 RPL39LQ96EH5 51 aaKnown RBP17.21■□□□□ 0.35
SRSF9-202ENST00000546942 NAT8BQ9UHF3 227 aa17.21■□□□□ 0.35
SRSF9-202ENST00000546942 SCXQ7RTU7 201 aa17.2■□□□□ 0.34
SRSF9-202ENST00000546942 PRSS1P07477 247 aa17.19■□□□□ 0.34
SRSF9-202ENST00000546942 IFITM2Q01629 132 aa17.19■□□□□ 0.34
SRSF9-202ENST00000546942 KRTAP26-1Q6PEX3 210 aa17.19■□□□□ 0.34
SRSF9-202ENST00000546942 LINC00528Q8N1L1 170 aa17.19■□□□□ 0.34
SRSF9-202ENST00000546942 FLG2Q5D862 2391 aaPredicted RBP17.18■□□□□ 0.34
SRSF9-202ENST00000546942 A0A1B0GUV1 79 aa17.18■□□□□ 0.34
SRSF9-202ENST00000546942 RIGQ13278 110 aa17.18■□□□□ 0.34
SRSF9-202ENST00000546942 NUP35Q8NFH5 326 aa17.18■□□□□ 0.34
SRSF9-202ENST00000546942 TMEM191AQ9H0A3 160 aa17.18■□□□□ 0.34
SRSF9-202ENST00000546942 PNRC1Q12796 327 aaPredicted RBP17.17■□□□□ 0.34
SRSF9-202ENST00000546942 SMIM27A0A1W2PRY6 76 aa17.16■□□□□ 0.34
SRSF9-202ENST00000546942 CHAC1Q9BUX1 264 aa17.16■□□□□ 0.34
SRSF9-202ENST00000546942 MYCBP2O75592 4640 aa17.16■□□□□ 0.34
SRSF9-202ENST00000546942 PLA2G1BP04054 148 aaKnown RBP17.15■□□□□ 0.34
SRSF9-202ENST00000546942 UQCC3Q6UW78 93 aa17.15■□□□□ 0.34
SRSF9-202ENST00000546942 A0A1B0GW15 77 aa17.14■□□□□ 0.33
SRSF9-202ENST00000546942 PPP1R2P9O14990 202 aa17.14■□□□□ 0.33
SRSF9-202ENST00000546942 TRAV8-4A0A0B4J246 113 aa17.13■□□□□ 0.33
SRSF9-202ENST00000546942 DMBT1Q9UGM3 2413 aaPredicted RBP17.13■□□□□ 0.33
SRSF9-202ENST00000546942 HERC1Q15751 4861 aa17.12■□□□□ 0.33
SRSF9-202ENST00000546942 IGKV3OR2-268A0A0C4DH90 116 aa17.12■□□□□ 0.33
SRSF9-202ENST00000546942 CIRBP-AS1Q8TBR5 109 aa17.12■□□□□ 0.33
SRSF9-202ENST00000546942 SDHAF1A6NFY7 115 aa17.11■□□□□ 0.33
SRSF9-202ENST00000546942 DGAT2L7PQ6IED9 249 aa17.11■□□□□ 0.33
SRSF9-202ENST00000546942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.1■□□□□ 0.33
SRSF9-202ENST00000546942 IGKV2-29A2NJV5 120 aaPredicted RBP17.1■□□□□ 0.33
SRSF9-202ENST00000546942 AMMECR1LQ6DCA0 310 aa17.1■□□□□ 0.33
SRSF9-202ENST00000546942 MRAP2Q96G30 205 aa17.1■□□□□ 0.33
SRSF9-202ENST00000546942 TRBV6-5A0A0K0K1A5 114 aa17.09■□□□□ 0.33
SRSF9-202ENST00000546942 hDV102S1A0JD36 115 aa17.09■□□□□ 0.33
SRSF9-202ENST00000546942 GAS8-AS1O95177 125 aa17.09■□□□□ 0.33
SRSF9-202ENST00000546942 APCSP02743 223 aa17.09■□□□□ 0.33
SRSF9-202ENST00000546942 PMCHP20382 165 aa17.09■□□□□ 0.33
SRSF9-202ENST00000546942 RNASEKQ6P5S7 137 aaKnown RBP17.09■□□□□ 0.33
SRSF9-202ENST00000546942 NCR2O95944 276 aa17.08■□□□□ 0.32
SRSF9-202ENST00000546942 S100A8P05109 93 aa17.08■□□□□ 0.32
SRSF9-202ENST00000546942 CLRN3Q8NCR9 226 aa17.08■□□□□ 0.32
SRSF9-202ENST00000546942 MT-ND4LP03901 98 aa17.07■□□□□ 0.32
SRSF9-202ENST00000546942 RAB4AP20338 218 aa17.07■□□□□ 0.32
SRSF9-202ENST00000546942 C9orf163Q8N9P6 203 aa17.07■□□□□ 0.32
SRSF9-202ENST00000546942 ANAPC16Q96DE5 110 aa17.07■□□□□ 0.32
SRSF9-202ENST00000546942 I3L3M4 83 aa17.06■□□□□ 0.32
SRSF9-202ENST00000546942 PPP1R17O96001 155 aa17.06■□□□□ 0.32
SRSF9-202ENST00000546942 RNF185Q96GF1 192 aa17.06■□□□□ 0.32
SRSF9-202ENST00000546942 ST20Q9HBF5 79 aa17.05■□□□□ 0.32
SRSF9-202ENST00000546942 GAGE12HA6NDE8 117 aa17.04■□□□□ 0.32
SRSF9-202ENST00000546942 FGF6P10767 208 aa17.04■□□□□ 0.32
SRSF9-202ENST00000546942 AMN1Q8IY45 258 aa17.04■□□□□ 0.32
SRSF9-202ENST00000546942 ATP5L2Q7Z4Y8 100 aa17.03■□□□□ 0.32
SRSF9-202ENST00000546942 TMEM218A2RU14 115 aa17.02■□□□□ 0.32
SRSF9-202ENST00000546942 HBBP68871 147 aa17.02■□□□□ 0.32
SRSF9-202ENST00000546942 FAM104BQ5XKR9 115 aa17.02■□□□□ 0.32
SRSF9-202ENST00000546942 AP5S1Q9NUS5 200 aa17.02■□□□□ 0.32
SRSF9-202ENST00000546942 TMEM242Q9NWH2 141 aa17.02■□□□□ 0.32
SRSF9-202ENST00000546942 LINC00862A6NCI5 91 aa17.01■□□□□ 0.31
SRSF9-202ENST00000546942 F8W036 122 aa17.01■□□□□ 0.31
SRSF9-202ENST00000546942 H7C423 109 aa17.01■□□□□ 0.31
SRSF9-202ENST00000546942 RPS10P46783 165 aaKnown RBP17.01■□□□□ 0.31
SRSF9-202ENST00000546942 CAMPP49913 170 aa17.01■□□□□ 0.31
SRSF9-202ENST00000546942 SMKR1H3BMG3 65 aa17■□□□□ 0.31
SRSF9-202ENST00000546942 TSHBP01222 138 aa17■□□□□ 0.31
SRSF9-202ENST00000546942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17■□□□□ 0.31
SRSF9-202ENST00000546942 A0A1B0GXF2 115 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms